RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 RNF34Q969K3 372 aa23.02■■□□□ 1.28
SMARCD2-206ENST00000577990 BTN2A3PQ96KV6 586 aa23.02■■□□□ 1.28
SMARCD2-206ENST00000577990 NPY6RQ99463 290 aa23.02■■□□□ 1.28
SMARCD2-206ENST00000577990 FAM126AQ9BYI3 521 aaPredicted RBP23.02■■□□□ 1.28
SMARCD2-206ENST00000577990 METTL5Q9NRN9 209 aaKnown RBP23.02■■□□□ 1.28
SMARCD2-206ENST00000577990 ZSCAN32Q9NX65 697 aa23.02■■□□□ 1.28
SMARCD2-206ENST00000577990 XPO7Q9UIA9 1087 aaKnown RBP23.02■■□□□ 1.28
SMARCD2-206ENST00000577990 TMEM59LQ9UK28 342 aa23.02■■□□□ 1.28
SMARCD2-206ENST00000577990 SLC8A2Q9UPR5 921 aa23.02■■□□□ 1.28
SMARCD2-206ENST00000577990 SLC27A6Q9Y2P4 619 aa23.02■■□□□ 1.28
SMARCD2-206ENST00000577990 PCDHGA2Q9Y5H1 932 aa23.02■■□□□ 1.28
SMARCD2-206ENST00000577990 CALB1P05937 261 aa23.01■■□□□ 1.27
SMARCD2-206ENST00000577990 CHRM1P11229 460 aaPredicted RBP23.01■■□□□ 1.27
SMARCD2-206ENST00000577990 TIE1P35590 1138 aa23.01■■□□□ 1.27
SMARCD2-206ENST00000577990 FLT3P36888 993 aa23.01■■□□□ 1.27
SMARCD2-206ENST00000577990 KIR2DL1P43626 348 aaPredicted RBP23.01■■□□□ 1.27
SMARCD2-206ENST00000577990 SULT1E1P49888 294 aa23.01■■□□□ 1.27
SMARCD2-206ENST00000577990 SGSHP51688 502 aa23.01■■□□□ 1.27
SMARCD2-206ENST00000577990 GSCP56915 257 aaPredicted RBP23.01■■□□□ 1.27
SMARCD2-206ENST00000577990 SYT13Q7L8C5 426 aa23.01■■□□□ 1.27
SMARCD2-206ENST00000577990 ARCQ7LC44 396 aa23.01■■□□□ 1.27
SMARCD2-206ENST00000577990 PHLDB2Q86SQ0 1253 aa23.01■■□□□ 1.27
SMARCD2-206ENST00000577990 DCLK2Q8N568 766 aa23.01■■□□□ 1.27
SMARCD2-206ENST00000577990 OLIG1Q8TAK6 271 aa23.01■■□□□ 1.27
SMARCD2-206ENST00000577990 NELL1Q92832 810 aa23.01■■□□□ 1.27
SMARCD2-206ENST00000577990 NT5C3BQ969T7 300 aa23.01■■□□□ 1.27
SMARCD2-206ENST00000577990 SLC2A11Q9BYW1 496 aa23.01■■□□□ 1.27
SMARCD2-206ENST00000577990 NUCKS1Q9H1E3 243 aaKnown RBP23.01■■□□□ 1.27
SMARCD2-206ENST00000577990 HAUS4Q9H6D7 363 aa23.01■■□□□ 1.27
SMARCD2-206ENST00000577990 SLC12A6Q9UHW9 1150 aa23.01■■□□□ 1.27
SMARCD2-206ENST00000577990 CLEC4EQ9ULY5 219 aa23.01■■□□□ 1.27
SMARCD2-206ENST00000577990 ITIH6Q6UXX5 1313 aa23.01■■□□□ 1.27
SMARCD2-206ENST00000577990 KCNU1A8MYU2 1149 aa23■■□□□ 1.27
SMARCD2-206ENST00000577990 ABCB4P21439 1286 aa23■■□□□ 1.27
SMARCD2-206ENST00000577990 NRLP54845 237 aa23■■□□□ 1.27
SMARCD2-206ENST00000577990 C1QBPQ07021 282 aaKnown RBP23■■□□□ 1.27
SMARCD2-206ENST00000577990 KLHL30Q0D2K2 578 aa23■■□□□ 1.27
SMARCD2-206ENST00000577990 SLC25A52Q3SY17 297 aa23■■□□□ 1.27
SMARCD2-206ENST00000577990 HSF5Q4G112 596 aaPredicted RBP23■■□□□ 1.27
SMARCD2-206ENST00000577990 EMC10Q5UCC4 262 aa23■■□□□ 1.27
SMARCD2-206ENST00000577990 MON1BQ7L1V2 547 aa23■■□□□ 1.27
SMARCD2-206ENST00000577990 HJURPQ8NCD3 748 aaPredicted RBP23■■□□□ 1.27
SMARCD2-206ENST00000577990 KCNV2Q8TDN2 545 aa23■■□□□ 1.27
SMARCD2-206ENST00000577990 PGAP3Q96FM1 320 aaPredicted RBP23■■□□□ 1.27
SMARCD2-206ENST00000577990 PRICKLE1Q96MT3 831 aaPredicted RBP23■■□□□ 1.27
SMARCD2-206ENST00000577990 ADAM33Q9BZ11 813 aa23■■□□□ 1.27
SMARCD2-206ENST00000577990 POLR3BQ9NW08 1133 aaPredicted RBP23■■□□□ 1.27
SMARCD2-206ENST00000577990 CALCOCO1Q9P1Z2 691 aa23■■□□□ 1.27
SMARCD2-206ENST00000577990 MMP17Q9ULZ9 603 aa23■■□□□ 1.27
SMARCD2-206ENST00000577990 CAPN11Q9UMQ6 739 aa23■■□□□ 1.27
SMARCD2-206ENST00000577990 STARD13Q9Y3M8 1113 aa23■■□□□ 1.27
SMARCD2-206ENST00000577990 MYO18AQ92614 2054 aaKnown RBP23■■□□□ 1.27
SMARCD2-206ENST00000577990 TYW5A2RUC4 315 aaKnown RBP22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 PRRT4C9JH25 899 aa22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 TBL1XO60907 577 aa22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 KLF8O95600 359 aaPredicted RBP22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 TFE3P19532 575 aaPredicted RBP22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 ZBED6P86452 979 aa22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 MTA1Q13330 715 aa22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 DMC1Q14565 340 aa22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 MS4A13Q5J8X5 152 aa22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 MPP7Q5T2T1 576 aa22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 RAP1GAP2Q684P5 730 aa22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 ACAD10Q6JQN1 1059 aa22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 TRNP1Q6NT89 227 aa22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 PPP1R2P3Q6NXS1 205 aa22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 ZNF571Q7Z3V5 609 aaPredicted RBP22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 ANKS1BQ7Z6G8 1248 aa22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 CHSY1Q86X52 802 aa22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 KIAA2013Q8IYS2 634 aa22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 CCDC33Q8N5R6 958 aa22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 ALLCQ8N6M5 410 aa22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 IL17RCQ8NAC3 791 aa22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 CPLX3Q8WVH0 158 aa22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 TBCBQ99426 244 aa22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 PIGVQ9NUD9 493 aa22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 TMEM51Q9NW97 253 aa22.99■■□□□ 1.27
SMARCD2-206ENST00000577990 LILRB5O75023 590 aa22.98■■□□□ 1.27
SMARCD2-206ENST00000577990 F9P00740 461 aa22.98■■□□□ 1.27
SMARCD2-206ENST00000577990 GYPCP04921 128 aa22.98■■□□□ 1.27
SMARCD2-206ENST00000577990 TACR2P21452 398 aa22.98■■□□□ 1.27
SMARCD2-206ENST00000577990 HOXA6P31267 233 aa22.98■■□□□ 1.27
SMARCD2-206ENST00000577990 HOXC13P31276 330 aa22.98■■□□□ 1.27
SMARCD2-206ENST00000577990 RNF43Q68DV7 783 aa22.98■■□□□ 1.27
SMARCD2-206ENST00000577990 SND1Q7KZF4 910 aaKnown RBP eCLIP22.98■■□□□ 1.27
SMARCD2-206ENST00000577990 TRMT11Q7Z4G4 463 aaKnown RBP22.98■■□□□ 1.27
SMARCD2-206ENST00000577990 EMC1Q8N766 993 aa22.98■■□□□ 1.27
SMARCD2-206ENST00000577990 ZNF513Q8N8E2 541 aaPredicted RBP22.98■■□□□ 1.27
SMARCD2-206ENST00000577990 TXNDC5Q8NBS9 432 aaKnown RBP22.98■■□□□ 1.27
SMARCD2-206ENST00000577990 C3orf20Q8ND61 904 aa22.98■■□□□ 1.27
SMARCD2-206ENST00000577990 RUBCNQ92622 972 aa22.98■■□□□ 1.27
SMARCD2-206ENST00000577990 SYN2Q92777 582 aaPredicted RBP22.98■■□□□ 1.27
SMARCD2-206ENST00000577990 MYEOVQ96EZ4 313 aa22.98■■□□□ 1.27
SMARCD2-206ENST00000577990 CFAP57Q96MR6 1250 aa22.98■■□□□ 1.27
SMARCD2-206ENST00000577990 LUC7L2Q9Y383 392 aaKnown RBP22.98■■□□□ 1.27
SMARCD2-206ENST00000577990 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.98■■□□□ 1.27
SMARCD2-206ENST00000577990 SKILP12757 684 aa22.97■■□□□ 1.27
SMARCD2-206ENST00000577990 CXCR3P49682 368 aa22.97■■□□□ 1.27
SMARCD2-206ENST00000577990 DEUP1Q05D60 604 aa22.97■■□□□ 1.27
SMARCD2-206ENST00000577990 DMWDQ09019 674 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms