RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 DHCR24Q15392 516 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 FAM133BQ5BKY9 247 aaKnown RBP8.88□□□□□ -0.99
NUP88-211ENST00000575976 MS4A13Q5J8X5 152 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 IER5LQ5T953 404 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 RAP1GAP2Q684P5 730 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 RHBDF2Q6PJF5 856 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 TMEM25Q86YD3 366 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 FAM217AQ8IXS0 508 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 CPXM2Q8N436 756 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 CCDC185Q8N715 623 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 NIPA2Q8N8Q9 360 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 IRF7Q92985 503 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 OTUB2Q96DC9 234 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 MYEOVQ96EZ4 313 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 BTN2A3PQ96KV6 586 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 MAGEB5Q9BZ81 275 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 IRF2BPLQ9H1B7 796 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 ECT2Q9H8V3 914 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 TMEM51Q9NW97 253 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 GTSE1Q9NYZ3 720 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 PCSK1NQ9UHG2 260 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 STOML2Q9UJZ1 356 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 DUSP12Q9UNI6 340 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 HS3ST4Q9Y661 456 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 CFAP54Q96N23 3096 aa8.88□□□□□ -0.99
NUP88-211ENST00000575976 HELZP42694 1942 aaKnown RBP8.88□□□□□ -0.99
NUP88-211ENST00000575976 GFRA2O00451 464 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 BUB1BO60566 1050 aaPredicted RBP8.87□□□□□ -0.99
NUP88-211ENST00000575976 TSPAN3O60637 253 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 NFATC1O95644 943 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 CYP17A1P05093 508 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 CCDC175P0C221 793 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 TCF4P15884 667 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 TACR2P21452 398 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 IL1R2P27930 398 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 PCK1P35558 622 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 CHKAP35790 457 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 ARHGAP25P42331 645 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 MLLT6P55198 1093 aaPredicted RBP8.87□□□□□ -0.99
NUP88-211ENST00000575976 NAP1L1P55209 391 aaKnown RBP8.87□□□□□ -0.99
NUP88-211ENST00000575976 ARL13BQ3SXY8 428 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 LY6G5CQ5SRR4 150 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 ADGRF1Q5T601 910 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 PIK3R6Q5UE93 754 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 RFWD3Q6PCD5 774 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 TPGS1Q6ZTW0 290 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 SLFN11Q7Z7L1 901 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 C14orf80Q86SX3 495 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 CHSY1Q86X52 802 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 TXLNBQ8N3L3 684 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 CPA6Q8N4T0 437 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 TPCN2Q8NHX9 752 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 CSGALNACT1Q8TDX6 532 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 ATP2A3Q93084 1043 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 NTAN1Q96AB6 310 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 P2RY11Q96G91 374 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 HAPLN3Q96S86 360 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 PEBP4Q96S96 227 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 PRMT1Q99873 361 aaKnown RBP8.87□□□□□ -0.99
NUP88-211ENST00000575976 NCAPGQ9BPX3 1015 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 DDX50Q9BQ39 737 aaKnown RBP8.87□□□□□ -0.99
NUP88-211ENST00000575976 SIK2Q9H0K1 926 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 TRPV5Q9NQA5 729 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 SLC2A4RGQ9NR83 387 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 SPHK2Q9NRA0 654 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 GPATCH2LQ9NWQ4 482 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 FZD10Q9ULW2 581 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 USP18Q9UMW8 372 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 PPP2R2CQ9Y2T4 447 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 HYOU1Q9Y4L1 999 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 PAXBP1Q9Y5B6 917 aa8.87□□□□□ -0.99
NUP88-211ENST00000575976 MACROD2A1Z1Q3 448 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 PRPSAP2O60256 369 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 MOCS3O95396 460 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 MAN1A1P33908 653 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 SSR1P43307 286 aaKnown RBP8.86□□□□□ -0.99
NUP88-211ENST00000575976 SOX9P48436 509 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 SGSHP51688 502 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 TAS2R40P59535 323 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 PFKPQ01813 784 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 GAD2Q05329 585 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 MTA1Q13330 715 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 AUHQ13825 339 aaKnown RBP8.86□□□□□ -0.99
NUP88-211ENST00000575976 CA9Q16790 459 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 GAB4Q2WGN9 574 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 ANO4Q32M45 955 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 ITPRIPL2Q3MIP1 535 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 MPPE1Q53F39 396 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 SLC44A4Q53GD3 710 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 ARTNQ5T4W7 220 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 TXNRD3NBQ6F5E7 133 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 FBXL22Q6P050 247 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 ZNF662Q6ZS27 426 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 CYP4V2Q6ZWL3 525 aaPredicted RBP8.86□□□□□ -0.99
NUP88-211ENST00000575976 LGI2Q8N0V4 545 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 CFAP52Q8N1V2 620 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 PYROXD2Q8N2H3 581 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 DNASE1L2Q92874 299 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 BHMTQ93088 406 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 IGSF8Q969P0 613 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms