RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 TTLL3Q9Y4R7 772 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 ARHGEF37A1IGU5 675 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 DCLK1O15075 740 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 ZWINTO95229 277 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 AMHP03971 560 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 ERCC2P18074 760 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 TAC1P20366 129 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 PAX3P23760 479 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 HOXD10P28358 340 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 FOXN2P32314 431 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 FDFT1P37268 417 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 GRIA1P42261 906 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 MAGEA3P43357 314 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 GLUD2P49448 558 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 SLC1A5Q15758 541 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 SEPT7Q16181 437 aaKnown RBP14.48□□□□□ -0.09
VPS33B-208ENST00000574755 HHATQ5VTY9 493 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 BSPRYQ5W0U4 402 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 GLB1LQ6UWU2 654 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 RAET1EQ8TD07 263 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 IRGQQ8WZA9 623 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 CCT6BQ92526 530 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 SUSD3Q96L08 255 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 PKMYT1Q99640 499 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 TRPV6Q9H1D0 765 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 USP15Q9Y4E8 981 aaPredicted RBP14.48□□□□□ -0.09
VPS33B-208ENST00000574755 PTPRDP23468 1912 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 FRMPD3Q5JV73 1810 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 OPHN1O60890 802 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 MT-ND3P03897 115 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 YWHAHQ04917 246 aaPredicted RBP14.48□□□□□ -0.09
VPS33B-208ENST00000574755 SEMA3BQ13214 749 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 PM20D1Q6GTS8 502 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 PDZD4Q76G19 769 aaPredicted RBP14.48□□□□□ -0.09
VPS33B-208ENST00000574755 LRRC6Q86X45 466 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 TP53INP2Q8IXH6 220 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 PPM1NQ8N819 430 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 CD99L2Q8TCZ2 262 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 SIGLEC10Q96LC7 697 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 KLF6Q99612 283 aaPredicted RBP14.48□□□□□ -0.09
VPS33B-208ENST00000574755 PITPNM3Q9BZ71 974 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 TKTL2Q9H0I9 626 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 RGS18Q9NS28 235 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 NLRC5Q86WI3 1866 aa14.48□□□□□ -0.09
VPS33B-208ENST00000574755 MOXD2PA6NHM9 499 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 CCT8L1PA6NM43 557 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 SUN1O94901 812 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 OAS1P00973 400 aaKnown RBP14.47□□□□□ -0.09
VPS33B-208ENST00000574755 APOEP02649 317 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 IFRD2Q12894 506 aaPredicted RBP14.47□□□□□ -0.09
VPS33B-208ENST00000574755 LVRNQ6Q4G3 990 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 UNC5AQ6ZN44 842 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 FAM47EQ6ZV65 393 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 SPATA21Q7Z572 469 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 SLC26A11Q86WA9 606 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 MPP5Q8N3R9 675 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 PDCD7Q8N8D1 485 aaKnown RBP14.47□□□□□ -0.09
VPS33B-208ENST00000574755 RNF34Q969K3 372 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 ALKBH8Q96BT7 664 aaKnown RBP14.47□□□□□ -0.09
VPS33B-208ENST00000574755 EBNA1BP2Q99848 306 aaKnown RBP14.47□□□□□ -0.09
VPS33B-208ENST00000574755 GRID1Q9ULK0 1009 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 CAPN7Q9Y6W3 813 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 TRDMT1O14717 391 aaKnown RBP14.47□□□□□ -0.09
VPS33B-208ENST00000574755 CDK16Q00536 496 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 FAAP100Q0VG06 881 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 DNAJC3Q13217 504 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 PDK4Q16654 411 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 SPRED3Q2MJR0 410 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 SLC24A5Q71RS6 500 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 RTN4RL1Q86UN2 441 aaPredicted RBP14.47□□□□□ -0.09
VPS33B-208ENST00000574755 TAC4Q86UU9 113 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 SPATA2LQ8IUW3 424 aaPredicted RBP14.47□□□□□ -0.09
VPS33B-208ENST00000574755 SCAMP5Q8TAC9 235 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 TRIM56Q9BRZ2 755 aaKnown RBP14.47□□□□□ -0.09
VPS33B-208ENST00000574755 KDM4CQ9H3R0 1056 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 PLAC1Q9HBJ0 212 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 OR12D3Q9UGF7 316 aa14.47□□□□□ -0.09
VPS33B-208ENST00000574755 H0YHG0 523 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 KCNK1O00180 336 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 TRPA1O75762 1119 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 FAM155BO75949 473 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 FSBPO95073 299 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 EOMESO95936 686 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 C1QAP02745 245 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 GSTA2P09210 222 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 TYMPP19971 482 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 PRKCHP24723 683 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 PSMB4P28070 264 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 HCAR3P49019 387 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 CXCR3P49682 368 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 WASHC5Q12768 1159 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 MBTPS1Q14703 1052 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 MTFR1Q15390 333 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 CASC4Q6P4E1 433 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 TRPM8Q7Z2W7 1104 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 ZNF280BQ86YH2 543 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 ZNF567Q8N184 647 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 BANPQ8N9N5 519 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 GSDMBQ8TAX9 411 aa14.46□□□□□ -0.09
VPS33B-208ENST00000574755 TCP10LQ8TDR4 215 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms