RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 TMEM25Q86YD3 366 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 SYNPOQ8N3V7 929 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 GPR161Q8N6U8 529 aaKnown RBP11.45□□□□□ -0.58
CHD3-216ENST00000573936 ATRIPQ8WXE1 791 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 PNKPQ96T60 521 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 IER2Q9BTL4 223 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 BBS2Q9BXC9 721 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 WDCPQ9H6R7 721 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 LMAN1LQ9HAT1 526 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 TAS2R14Q9NYV8 317 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 DLGAP2Q9P1A6 1054 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 ARHGAP20Q9P2F6 1191 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 SCINQ9Y6U3 715 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 FANCMQ8IYD8 2048 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 COL4A2P08572 1712 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 CACNA1GO43497 2377 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 SYNJ2BP-COX16A0A087WUM0 186 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 TYW5A2RUC4 315 aaKnown RBP11.44□□□□□ -0.58
CHD3-216ENST00000573936 KCNU1A8MYU2 1149 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 NEDD8-MDP1E9PL57 170 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 LAMTOR5O43504 91 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 ADCY5O95622 1261 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 APODP05090 189 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 CHRNB1P11230 501 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 TYRP14679 529 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 GPD1P21695 349 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 RRM1P23921 792 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 RDXP35241 583 aaKnown RBP11.44□□□□□ -0.58
CHD3-216ENST00000573936 FLT3P36888 993 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 EIF4A3P38919 411 aaKnown RBP11.44□□□□□ -0.58
CHD3-216ENST00000573936 OPRD1P41143 372 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 PTPN9P43378 593 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 PITX1P78337 314 aaPredicted RBP11.44□□□□□ -0.58
CHD3-216ENST00000573936 RSPO4Q2I0M5 234 aaPredicted RBP11.44□□□□□ -0.58
CHD3-216ENST00000573936 ZC3H12AQ5D1E8 599 aaKnown RBP11.44□□□□□ -0.58
CHD3-216ENST00000573936 CCDC122Q5T0U0 273 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 ALKBH5Q6P6C2 394 aaKnown RBP11.44□□□□□ -0.58
CHD3-216ENST00000573936 DCUN1D2Q6PH85 259 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 WDR59Q6PJI9 974 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 STRADAQ7RTN6 431 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 PHLDB2Q86SQ0 1253 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 DCLK2Q8N568 766 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 ZNF557Q8N988 423 aaPredicted RBP11.44□□□□□ -0.58
CHD3-216ENST00000573936 OLIG1Q8TAK6 271 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 DDI1Q8WTU0 396 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 RXFP2Q8WXD0 754 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 CLDN23Q96B33 292 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 CHFRQ96EP1 664 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 TMA16Q96EY4 203 aaKnown RBP11.44□□□□□ -0.58
CHD3-216ENST00000573936 CCDC42Q96M95 316 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 CFAP57Q96MR6 1250 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 TBCBQ99426 244 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 MRPL47Q9HD33 250 aaKnown RBP11.44□□□□□ -0.58
CHD3-216ENST00000573936 SPATA6Q9NWH7 488 aaPredicted RBP11.44□□□□□ -0.58
CHD3-216ENST00000573936 COX16Q9P0S2 106 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 DEC1Q9P2X7 70 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 MTF2Q9Y483 593 aaPredicted RBP11.44□□□□□ -0.58
CHD3-216ENST00000573936 TICRRQ7Z2Z1 1910 aa11.44□□□□□ -0.58
CHD3-216ENST00000573936 A0A0A0MRY4 1105 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 TCRBV5S1A1TA0A578 114 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 C2CD4BA6NLJ0 364 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 GOLGA6L6A8MZA4 724 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 AKR1B10O60218 316 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 CACNG3O60359 315 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 ENDOD1O94919 500 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 MOCS2O96007 188 aaPredicted RBP11.43□□□□□ -0.58
CHD3-216ENST00000573936 PENKP01210 267 aaPredicted RBP11.43□□□□□ -0.58
CHD3-216ENST00000573936 PLEKP08567 350 aaPredicted RBP11.43□□□□□ -0.58
CHD3-216ENST00000573936 CDC25BP30305 580 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 GRIA2P42262 883 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 TNFRSF4P43489 277 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 CXCR3P49682 368 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 FZD5Q13467 585 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 E2F5Q15329 346 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 SLC18A3Q16572 532 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 GAB4Q2WGN9 574 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 MPP7Q5T2T1 576 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 PIK3R6Q5UE93 754 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 FYB2Q5VWT5 728 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 GRAMD4Q6IC98 578 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 PLEKHA7Q6IQ23 1121 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 BNIPLQ7Z465 357 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.43□□□□□ -0.58
CHD3-216ENST00000573936 CCDC117Q8IWD4 279 aaPredicted RBP11.43□□□□□ -0.58
CHD3-216ENST00000573936 ETFBKMTQ8IXQ9 262 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 ZNF687Q8N1G0 1237 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 EMC1Q8N766 993 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 NAT16Q8N8M0 369 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 JOSD2Q8TAC2 188 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 ZNF653Q96CK0 615 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 SLC2A11Q9BYW1 496 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 NHEJ1Q9H9Q4 299 aaPredicted RBP11.43□□□□□ -0.58
CHD3-216ENST00000573936 ARHGEF4Q9NR80 690 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 DNAJC17Q9NVM6 304 aaKnown RBP11.43□□□□□ -0.58
CHD3-216ENST00000573936 ARHGEF38Q9NXL2 777 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 DLL3Q9NYJ7 618 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 IMPACTQ9P2X3 320 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 CNOT8Q9UFF9 292 aaKnown RBP11.43□□□□□ -0.58
CHD3-216ENST00000573936 FBXO10Q9UK96 956 aa11.43□□□□□ -0.58
CHD3-216ENST00000573936 F5P12259 2224 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms