RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 PGK2P07205 417 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 SMAD1Q15797 465 aaKnown RBP16.1■□□□□ 0.17
NUP88-207ENST00000573584 AMHR2Q16671 573 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 PKDCCQ504Y2 493 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 SH3D19Q5HYK7 790 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 BSPRYQ5W0U4 402 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 MAVSQ7Z434 540 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 HTR3CQ8WXA8 447 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 COPS5Q92905 334 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 CSPG4P5Q96PW8 444 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 NFKBIZQ9BYH8 718 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 R3HDMLQ9H3Y0 253 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 PSAT1Q9Y617 370 aa16.1■□□□□ 0.17
NUP88-207ENST00000573584 CCNT2O60583 730 aaKnown RBP16.09■□□□□ 0.17
NUP88-207ENST00000573584 GABBR2O75899 941 aa16.09■□□□□ 0.17
NUP88-207ENST00000573584 PDE5AO76074 875 aa16.09■□□□□ 0.17
NUP88-207ENST00000573584 ARF4P18085 180 aaPredicted RBP16.09■□□□□ 0.17
NUP88-207ENST00000573584 GRK2P25098 689 aa16.09■□□□□ 0.17
NUP88-207ENST00000573584 ATG14Q6ZNE5 492 aa16.09■□□□□ 0.17
NUP88-207ENST00000573584 TFB1MQ8WVM0 346 aaKnown RBP16.09■□□□□ 0.17
NUP88-207ENST00000573584 CCDC124Q96CT7 223 aaKnown RBP16.09■□□□□ 0.17
NUP88-207ENST00000573584 RNPEPQ9H4A4 650 aa16.09■□□□□ 0.17
NUP88-207ENST00000573584 CYP4F11Q9HBI6 524 aa16.09■□□□□ 0.17
NUP88-207ENST00000573584 MTMR10Q9NXD2 777 aa16.09■□□□□ 0.17
NUP88-207ENST00000573584 MORF4L1Q9UBU8 362 aa16.09■□□□□ 0.17
NUP88-207ENST00000573584 RNASEH1O60930 286 aaKnown RBP16.09■□□□□ 0.17
NUP88-207ENST00000573584 SORBS2O94875 1100 aaKnown RBP16.09■□□□□ 0.17
NUP88-207ENST00000573584 ITGA2BP08514 1039 aa16.09■□□□□ 0.17
NUP88-207ENST00000573584 MLNP12872 115 aa16.09■□□□□ 0.17
NUP88-207ENST00000573584 SLC26A2P50443 739 aa16.09■□□□□ 0.17
NUP88-207ENST00000573584 FAM187BQ17R55 369 aa16.09■□□□□ 0.17
NUP88-207ENST00000573584 PPM1JQ5JR12 505 aa16.09■□□□□ 0.17
NUP88-207ENST00000573584 CFAP157Q5JU67 520 aa16.09■□□□□ 0.17
NUP88-207ENST00000573584 VWA5B1Q5TIE3 1220 aa16.09■□□□□ 0.17
NUP88-207ENST00000573584 OR6Y1Q8NGX8 325 aa16.09■□□□□ 0.17
NUP88-207ENST00000573584 SORT1Q99523 831 aa16.09■□□□□ 0.17
NUP88-207ENST00000573584 LGMNQ99538 433 aa16.09■□□□□ 0.17
NUP88-207ENST00000573584 MRPL45Q9BRJ2 306 aaKnown RBP16.09■□□□□ 0.17
NUP88-207ENST00000573584 MFHAS1Q9Y4C4 1052 aa16.09■□□□□ 0.17
NUP88-207ENST00000573584 A0A0A0MRY4 1105 aa16.08■□□□□ 0.17
NUP88-207ENST00000573584 LOC100653049A0A140TA62 436 aa16.08■□□□□ 0.17
NUP88-207ENST00000573584 SOCS7O14512 581 aa16.08■□□□□ 0.17
NUP88-207ENST00000573584 KRT34O76011 436 aa16.08■□□□□ 0.17
NUP88-207ENST00000573584 C22orf31O95567 290 aa16.08■□□□□ 0.17
NUP88-207ENST00000573584 NCF2P19878 526 aaPredicted RBP16.08■□□□□ 0.17
NUP88-207ENST00000573584 MGAT1P26572 445 aa16.08■□□□□ 0.17
NUP88-207ENST00000573584 FDFT1P37268 417 aa16.08■□□□□ 0.17
NUP88-207ENST00000573584 SNX16P57768 344 aa16.08■□□□□ 0.17
NUP88-207ENST00000573584 RASIP1Q5U651 963 aa16.08■□□□□ 0.17
NUP88-207ENST00000573584 RNF111Q6ZNA4 994 aa16.08■□□□□ 0.17
NUP88-207ENST00000573584 APOBEC3FQ8IUX4 373 aaKnown RBP16.08■□□□□ 0.17
NUP88-207ENST00000573584 COLGALT1Q8NBJ5 622 aa16.08■□□□□ 0.17
NUP88-207ENST00000573584 CLEC4CQ8WTT0 213 aa16.08■□□□□ 0.17
NUP88-207ENST00000573584 CMTM5Q96DZ9 223 aa16.08■□□□□ 0.17
NUP88-207ENST00000573584 KIF12Q96FN5 646 aa16.08■□□□□ 0.17
NUP88-207ENST00000573584 SPATA13Q96N96 652 aa16.08■□□□□ 0.17
NUP88-207ENST00000573584 KCTD15Q96SI1 283 aaPredicted RBP16.08■□□□□ 0.17
NUP88-207ENST00000573584 DNAJC28Q9NX36 388 aa16.08■□□□□ 0.17
NUP88-207ENST00000573584 CPSF2Q9P2I0 782 aaKnown RBP16.08■□□□□ 0.17
NUP88-207ENST00000573584 SNX9Q9Y5X1 595 aa16.08■□□□□ 0.17
NUP88-207ENST00000573584 VAV1P15498 845 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 CCNIQ14094 377 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 HNRNPDQ14103 355 aaKnown RBP16.08■□□□□ 0.16
NUP88-207ENST00000573584 NCBP2-AS2Q69YL0 99 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 PDPK2PQ6A1A2 396 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 LRRC8BQ6P9F7 803 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 MTHFD1LQ6UB35 978 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 AEBP2Q6ZN18 517 aaPredicted RBP16.08■□□□□ 0.16
NUP88-207ENST00000573584 PDSS2Q86YH6 399 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 HIPK4Q8NE63 616 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 AFG1LQ8WV93 481 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 MPHOSPH6Q99547 160 aaKnown RBP16.08■□□□□ 0.16
NUP88-207ENST00000573584 FAM96AQ9H5X1 160 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 FAM124BQ9H5Z6 455 aaPredicted RBP16.08■□□□□ 0.16
NUP88-207ENST00000573584 TMEM216Q9P0N5 145 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 TXNDC16Q9P2K2 825 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 CDH22Q9UJ99 828 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 NFKBIEO00221 500 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 STAU1O95793 577 aaKnown RBP16.08■□□□□ 0.16
NUP88-207ENST00000573584 SETSIPP0DME0 302 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 RALBP11234 206 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 TYK2P29597 1187 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 ARRB2P32121 409 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 PTPN9P43378 593 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 RAB27AP51159 221 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 LPCAT4Q643R3 524 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 PGM2L1Q6PCE3 622 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 ZDHHC17Q8IUH5 632 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 FBXO16Q8IX29 292 aaPredicted RBP16.08■□□□□ 0.16
NUP88-207ENST00000573584 CCDC185Q8N715 623 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 ACTRT2Q8TDY3 377 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 IL1RAPL1Q9NZN1 696 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 COPG2Q9UBF2 871 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 ADAMTS6Q9UKP5 1117 aa16.08■□□□□ 0.16
NUP88-207ENST00000573584 AP1G2O75843 785 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 PRKCGP05129 697 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 MYL4P12829 197 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 GOT1P17174 413 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 PGAM1P18669 254 aa16.07■□□□□ 0.16
NUP88-207ENST00000573584 INHBEP58166 350 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms