RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 SLC2A3P11169 496 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 HNRNPLP14866 589 aaKnown RBP eCLIP11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 CCR1P32246 355 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 GBP1P32455 592 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 CNR2P34972 360 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 GSCP56915 257 aaPredicted RBP11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 UBASH3AP57075 661 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 CLEC16AQ2KHT3 1053 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 MS4A13Q5J8X5 152 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 EOGTQ5NDL2 527 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 FAM102AQ5T9C2 384 aaPredicted RBP11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 EGFLAMQ63HQ2 1017 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 HEATR6Q6AI08 1181 aaKnown RBP11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 TRNP1Q6NT89 227 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 LRSAM1Q6UWE0 723 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 TMEM92Q6UXU6 159 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 MMS22LQ6ZRQ5 1243 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 BNIPLQ7Z465 357 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 TRMT11Q7Z4G4 463 aaKnown RBP11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 KIAA0907Q7Z7F0 614 aaPredicted RBP11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 PHF13Q86YI8 300 aaPredicted RBP11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 CCDC33Q8N5R6 958 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 SLC30A5Q8TAD4 765 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 MYEOVQ96EZ4 313 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 PGAP3Q96FM1 320 aaPredicted RBP11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 PRICKLE1Q96MT3 831 aaPredicted RBP11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 HHIPQ96QV1 700 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 AGPAT1Q99943 283 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 DDX50Q9BQ39 737 aaKnown RBP11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 NUCKS1Q9H1E3 243 aaKnown RBP11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 FAM204AQ9H8W3 233 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 ZDHHC4Q9NPG8 344 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 AIPL1Q9NZN9 384 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 EBF1Q9UH73 591 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 PTPRZ1P23471 2315 aaPredicted RBP11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 OTOGLQ3ZCN5 2332 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 FAM186AA6NE01 2351 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 EP300Q09472 2414 aaPredicted RBP11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 ZNF292O60281 2723 aa11.49□□□□□ -0.57
SHCBP1-207ENST00000569702 FAM170AA1A519 330 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 LRRC53A6NM62 1247 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 GOLGA8SH3BPF8 625 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 M0QYT0 321 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 HRO43593 1189 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 GFRA3O60609 400 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 APBB3O95704 486 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 MOCS2O96007 188 aaPredicted RBP11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 TFE3P19532 575 aaPredicted RBP11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 HLA-FP30511 346 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 NTSR1P30989 418 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 FLT3P36888 993 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 NSFP46459 744 aaKnown RBP11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 PXNP49023 591 aaPredicted RBP11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 DGKEP52429 567 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 RNASE9P60153 205 aaKnown RBP11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 MTA1Q13330 715 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 EIF4HQ15056 248 aaKnown RBP11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 SLC25A52Q3SY17 297 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 E4F1Q66K89 784 aaPredicted RBP11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 TMEM215Q68D42 235 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 ANKS1BQ7Z6G8 1248 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 RASSF3Q86WH2 238 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 ATP6V0D2Q8N8Y2 350 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 HJURPQ8NCD3 748 aaPredicted RBP11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 LMLNQ96KR4 655 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 ACOX2Q99424 681 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 PRMT1Q99873 361 aaKnown RBP11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 GABRG3Q99928 467 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 C11orf70Q9BRQ4 267 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 NUP58Q9BVL2 599 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 CD248Q9HCU0 757 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 PIGVQ9NUD9 493 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 TMEM51Q9NW97 253 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 SLC12A6Q9UHW9 1150 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 STAP1Q9ULZ2 295 aa11.48□□□□□ -0.57
SHCBP1-207ENST00000569702 GVINP1Q7Z2Y8 2422 aa11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 SYNJ2BP-COX16A0A087WUM0 186 aa11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 A0A1W2PQF6 199 aa11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 A0A1W2PQJ5 194 aa11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 NPC1O15118 1278 aa11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 AXIN1O15169 862 aa11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 TIMM44O43615 452 aa11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 TBL1XO60907 577 aa11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 ENDOD1O94919 500 aa11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 F9P00740 461 aa11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 ABCB4P21439 1286 aa11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 TACR2P21452 398 aa11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 PRKCIP41743 596 aa11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 CXCR3P49682 368 aa11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 RPS24P62847 133 aaKnown RBP11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 C1QBPQ07021 282 aaKnown RBP11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 NME3Q13232 169 aa11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 ENPP2Q13822 863 aa11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 RAP1GAP2Q684P5 730 aa11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 MON1BQ7L1V2 547 aa11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 ADIPOR2Q86V24 386 aa11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 ZNF557Q8N988 423 aaPredicted RBP11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 TSTD1Q8NFU3 115 aa11.47□□□□□ -0.57
SHCBP1-207ENST00000569702 FIBINQ8TAL6 211 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms