RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 MAN1A1P33908 653 aa17.34■□□□□ 0.37
COMMD4-224ENST00000568877 AIF1P55008 147 aa17.34■□□□□ 0.37
COMMD4-224ENST00000568877 MLLT6P55198 1093 aaPredicted RBP17.34■□□□□ 0.37
COMMD4-224ENST00000568877 ZXDAP98168 799 aa17.34■□□□□ 0.37
COMMD4-224ENST00000568877 MESDQ14696 234 aa17.34■□□□□ 0.37
COMMD4-224ENST00000568877 SLC44A4Q53GD3 710 aa17.34■□□□□ 0.37
COMMD4-224ENST00000568877 ACBD5Q5T8D3 534 aaPredicted RBP17.34■□□□□ 0.37
COMMD4-224ENST00000568877 PIK3R6Q5UE93 754 aa17.34■□□□□ 0.37
COMMD4-224ENST00000568877 RAP1GAP2Q684P5 730 aa17.34■□□□□ 0.37
COMMD4-224ENST00000568877 RFWD3Q6PCD5 774 aa17.34■□□□□ 0.37
COMMD4-224ENST00000568877 SLFN11Q7Z7L1 901 aa17.34■□□□□ 0.37
COMMD4-224ENST00000568877 CHSY1Q86X52 802 aa17.34■□□□□ 0.37
COMMD4-224ENST00000568877 CALR3Q96L12 384 aaKnown RBP17.34■□□□□ 0.37
COMMD4-224ENST00000568877 C1orf74Q96LT6 269 aa17.34■□□□□ 0.37
COMMD4-224ENST00000568877 IRX2Q9BZI1 471 aaPredicted RBP17.34■□□□□ 0.37
COMMD4-224ENST00000568877 SIK2Q9H0K1 926 aa17.34■□□□□ 0.37
COMMD4-224ENST00000568877 HEBP1Q9NRV9 189 aa17.34■□□□□ 0.37
COMMD4-224ENST00000568877 WNT16Q9UBV4 365 aa17.34■□□□□ 0.37
COMMD4-224ENST00000568877 PCSK1NQ9UHG2 260 aa17.34■□□□□ 0.37
COMMD4-224ENST00000568877 SALL4Q9UJQ4 1053 aa17.34■□□□□ 0.37
COMMD4-224ENST00000568877 HS3ST4Q9Y661 456 aa17.34■□□□□ 0.37
COMMD4-224ENST00000568877 A0A0U1RQJ8 604 aa17.33■□□□□ 0.36
COMMD4-224ENST00000568877 TMEM110-MUSTN1A8MSY1 372 aa17.33■□□□□ 0.36
COMMD4-224ENST00000568877 DCXO43602 365 aa17.33■□□□□ 0.36
COMMD4-224ENST00000568877 PRPSAP2O60256 369 aa17.33■□□□□ 0.36
COMMD4-224ENST00000568877 TSPAN3O60637 253 aa17.33■□□□□ 0.36
COMMD4-224ENST00000568877 CYBBP04839 570 aa17.33■□□□□ 0.36
COMMD4-224ENST00000568877 ADH5P11766 374 aa17.33■□□□□ 0.36
COMMD4-224ENST00000568877 GAD2Q05329 585 aa17.33■□□□□ 0.36
COMMD4-224ENST00000568877 SCAPQ12770 1279 aa17.33■□□□□ 0.36
COMMD4-224ENST00000568877 AUHQ13825 339 aaKnown RBP17.33■□□□□ 0.36
COMMD4-224ENST00000568877 ANO4Q32M45 955 aa17.33■□□□□ 0.36
COMMD4-224ENST00000568877 IER5LQ5T953 404 aa17.33■□□□□ 0.36
COMMD4-224ENST00000568877 DAB2IPQ5VWQ8 1189 aa17.33■□□□□ 0.36
COMMD4-224ENST00000568877 ATRIPQ8WXE1 791 aa17.33■□□□□ 0.36
COMMD4-224ENST00000568877 TMA16Q96EY4 203 aaKnown RBP17.33■□□□□ 0.36
COMMD4-224ENST00000568877 PRMT1Q99873 361 aaKnown RBP17.33■□□□□ 0.36
COMMD4-224ENST00000568877 BBS2Q9BXC9 721 aa17.33■□□□□ 0.36
COMMD4-224ENST00000568877 MARK1Q9P0L2 795 aa17.33■□□□□ 0.36
COMMD4-224ENST00000568877 FZD10Q9ULW2 581 aa17.33■□□□□ 0.36
COMMD4-224ENST00000568877 USP18Q9UMW8 372 aa17.33■□□□□ 0.36
COMMD4-224ENST00000568877 MYO10Q9HD67 2058 aa17.32■□□□□ 0.36
COMMD4-224ENST00000568877 F5H5T6 163 aa17.32■□□□□ 0.36
COMMD4-224ENST00000568877 HOXC11O43248 304 aaPredicted RBP17.32■□□□□ 0.36
COMMD4-224ENST00000568877 BUB1O43683 1085 aa17.32■□□□□ 0.36
COMMD4-224ENST00000568877 BUB1BO60566 1050 aaPredicted RBP17.32■□□□□ 0.36
COMMD4-224ENST00000568877 GLULP15104 373 aa17.32■□□□□ 0.36
COMMD4-224ENST00000568877 GJA4P35212 333 aa17.32■□□□□ 0.36
COMMD4-224ENST00000568877 AMPD2Q01433 879 aa17.32■□□□□ 0.36
COMMD4-224ENST00000568877 GAB4Q2WGN9 574 aa17.32■□□□□ 0.36
COMMD4-224ENST00000568877 MPPE1Q53F39 396 aa17.32■□□□□ 0.36
COMMD4-224ENST00000568877 EFHC2Q5JST6 749 aa17.32■□□□□ 0.36
COMMD4-224ENST00000568877 ERMARDQ5T6L9 678 aa17.32■□□□□ 0.36
COMMD4-224ENST00000568877 FYB2Q5VWT5 728 aa17.32■□□□□ 0.36
COMMD4-224ENST00000568877 LGI2Q8N0V4 545 aa17.32■□□□□ 0.36
COMMD4-224ENST00000568877 DDI1Q8WTU0 396 aa17.32■□□□□ 0.36
COMMD4-224ENST00000568877 EDAQ92838 391 aa17.32■□□□□ 0.36
COMMD4-224ENST00000568877 MYEOVQ96EZ4 313 aa17.32■□□□□ 0.36
COMMD4-224ENST00000568877 PEBP4Q96S96 227 aa17.32■□□□□ 0.36
COMMD4-224ENST00000568877 TSGA10Q9BZW7 698 aa17.32■□□□□ 0.36
COMMD4-224ENST00000568877 OSBPL2Q9H1P3 480 aa17.32■□□□□ 0.36
COMMD4-224ENST00000568877 C8orf33Q9H7E9 229 aaPredicted RBP17.32■□□□□ 0.36
COMMD4-224ENST00000568877 FBXL21Q9UKT6 434 aa17.32■□□□□ 0.36
COMMD4-224ENST00000568877 SNX10Q9Y5X0 201 aa17.32■□□□□ 0.36
COMMD4-224ENST00000568877 PIAS3Q9Y6X2 628 aa17.32■□□□□ 0.36
COMMD4-224ENST00000568877 NEDD8-MDP1E9PL57 170 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 SPECC1L-ADORA2AF8WAN1 911 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 PENKP01210 267 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-224ENST00000568877 ALADP13716 330 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 TYRP14679 529 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 TCF4P15884 667 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 GGCXP38435 758 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 SSR1P43307 286 aaKnown RBP17.31■□□□□ 0.36
COMMD4-224ENST00000568877 SOX9P48436 509 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 SGSHP51688 502 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 NAP1L1P55209 391 aaKnown RBP17.31■□□□□ 0.36
COMMD4-224ENST00000568877 MLF2Q15773 248 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-224ENST00000568877 HADHQ16836 314 aaKnown RBP17.31■□□□□ 0.36
COMMD4-224ENST00000568877 BOLA3Q53S33 107 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 FBXL22Q6P050 247 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 CYP4V2Q6ZWL3 525 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-224ENST00000568877 C14orf80Q86SX3 495 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 RALGPS2Q86X27 583 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-224ENST00000568877 CPNE8Q86YQ8 564 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 PSTKQ8IV42 348 aaKnown RBP17.31■□□□□ 0.36
COMMD4-224ENST00000568877 HJURPQ8NCD3 748 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-224ENST00000568877 TPCN2Q8NHX9 752 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 BHMTQ93088 406 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 P2RY11Q96G91 374 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 MSANTD3Q96H12 275 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 PRICKLE1Q96MT3 831 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-224ENST00000568877 MAGEB5Q9BZ81 275 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 ARHGEF3Q9NR81 526 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 PLK2Q9NYY3 685 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 TRIM10Q9UDY6 481 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 OR12D3Q9UGF7 316 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 VANGL2Q9ULK5 521 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 CA14Q9ULX7 337 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 AP4E1Q9UPM8 1137 aa17.31■□□□□ 0.36
COMMD4-224ENST00000568877 PPP2R2CQ9Y2T4 447 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms