RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 GPR174Q9BXC1 333 aa12.72□□□□□ -0.37
GTF3C1-208ENST00000567843 SLC2A11Q9BYW1 496 aa12.72□□□□□ -0.37
GTF3C1-208ENST00000567843 MTG2Q9H4K7 406 aa12.72□□□□□ -0.37
GTF3C1-208ENST00000567843 AJAP1Q9UKB5 411 aaPredicted RBP12.72□□□□□ -0.37
GTF3C1-208ENST00000567843 KNL1Q8NG31 2342 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 SYNJ2BP-COX16A0A087WUM0 186 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 BECN2A8MW95 431 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 KCNJ18B7U540 433 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 E5RJQ4 531 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 CAPN9O14815 690 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 PAPSS1O43252 624 aaPredicted RBP12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 ACSL4O60488 711 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 FBXO21O94952 628 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 PNMA6AP0CW24 399 aaPredicted RBP12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 CD70P32970 193 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 SLC11A2P49281 568 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 RPS24P62847 133 aaKnown RBP12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 PITX1P78337 314 aaPredicted RBP12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 TAF5Q15542 800 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 FAM133BQ5BKY9 247 aaKnown RBP12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 PIK3R6Q5UE93 754 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 TRIM65Q6PJ69 517 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 GBP6Q6ZN66 633 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 TAC4Q86UU9 113 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 ADIPOR2Q86V24 386 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 CFAP52Q8N1V2 620 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 CARNMT1Q8N4J0 409 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 SIPA1Q96FS4 1042 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 FCRL2Q96LA5 508 aaPredicted RBP12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 COX16Q9P0S2 106 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 EVLQ9UI08 416 aaPredicted RBP12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 XPO7Q9UIA9 1087 aaKnown RBP12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 GGA2Q9UJY4 613 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 STOML2Q9UJZ1 356 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 SLC6A14Q9UN76 642 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 CNTN6Q9UQ52 1028 aa12.71□□□□□ -0.37
GTF3C1-208ENST00000567843 IGLV3-27P01718 113 aa12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 PABPC1P11940 636 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 CD6P30203 668 aa12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 TPMTP51580 245 aa12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 COPAP53621 1224 aa12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 ATXN3P54252 364 aaPredicted RBP12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 GFPT1Q06210 699 aaPredicted RBP12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 LMAN2Q12907 356 aa12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 ENPP2Q13822 863 aa12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 EIF4HQ15056 248 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 EXOC3L4Q17RC7 722 aa12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 DUOXA1Q1HG43 343 aa12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 ZC3H12AQ5D1E8 599 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 SPDYCQ5MJ68 293 aa12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 NUGGCQ68CJ6 796 aa12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 MBLAC2Q68D91 279 aa12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 SLC23A3Q6PIS1 610 aa12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 MMS22LQ6ZRQ5 1243 aa12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 UNC45BQ8IWX7 931 aa12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 PRCCQ92733 491 aaPredicted RBP12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 PRICKLE1Q96MT3 831 aaPredicted RBP12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 SLC4A5Q9BY07 1137 aa12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 NUCKS1Q9H1E3 243 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 MIR1-1HGQ9H1L0 117 aa12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 CLSTN2Q9H4D0 955 aa12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 ITM2CQ9NQX7 267 aa12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 WSB2Q9NYS7 404 aaPredicted RBP12.7□□□□□ -0.38
GTF3C1-208ENST00000567843 MEI4A8MW99 385 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 MED7O43513 233 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 GRAP2O75791 330 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 LATS1O95835 1130 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 TOP3BO95985 862 aaKnown RBP12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 ACADMP11310 421 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 SPINK2P20155 84 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 PON1P27169 355 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 ACADSBP45954 432 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 ZNF252P-AS1Q0IIN9 211 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 FOXC1Q12948 553 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 PDCLQ13371 301 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 PTPRNQ16849 979 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 DPCR1Q3MIW9 517 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 RAP1GAP2Q684P5 730 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 MFN1Q8IWA4 741 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 WDTC1Q8N5D0 677 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 WFIKKN2Q8TEU8 576 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 ZNF419Q96HQ0 510 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 SERPINB11Q96P15 392 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 PLCB1Q9NQ66 1216 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 APEX2Q9UBZ4 518 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 DNAJC12Q9UKB3 198 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 PLA2G4CQ9UP65 541 aa12.69□□□□□ -0.38
GTF3C1-208ENST00000567843 NUMA1Q14980 2115 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 PES1O00541 588 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 NPC1O15118 1278 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 TIMM44O43615 452 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 TRUB2O95900 331 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 SERPINF2P08697 491 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 POLR2EP19388 210 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 PMLP29590 882 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 CTSOP43234 321 aaPredicted RBP12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 RPL34P49207 117 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 ZNF445P59923 1031 aa12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 YWHAZP63104 245 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-208ENST00000567843 PLEKHG6Q3KR16 790 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms