RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 GRSF1Q12849 480 aaKnown RBP eCLIP12.88□□□□□ -0.35
RNF40-211ENST00000567365 ANO4Q32M45 955 aa12.88□□□□□ -0.35
RNF40-211ENST00000567365 RAB6CQ53S08 254 aa12.88□□□□□ -0.35
RNF40-211ENST00000567365 TDRD12Q587J7 1177 aaKnown RBP12.88□□□□□ -0.35
RNF40-211ENST00000567365 MS4A13Q5J8X5 152 aa12.88□□□□□ -0.35
RNF40-211ENST00000567365 Q6ZS52 159 aa12.88□□□□□ -0.35
RNF40-211ENST00000567365 ZNF683Q8IZ20 524 aa12.88□□□□□ -0.35
RNF40-211ENST00000567365 TERB1Q8NA31 727 aa12.88□□□□□ -0.35
RNF40-211ENST00000567365 RXFP2Q8WXD0 754 aa12.88□□□□□ -0.35
RNF40-211ENST00000567365 LMLNQ96KR4 655 aa12.88□□□□□ -0.35
RNF40-211ENST00000567365 BTN2A3PQ96KV6 586 aa12.88□□□□□ -0.35
RNF40-211ENST00000567365 CFAP57Q96MR6 1250 aa12.88□□□□□ -0.35
RNF40-211ENST00000567365 PRICKLE1Q96MT3 831 aaPredicted RBP12.88□□□□□ -0.35
RNF40-211ENST00000567365 PNKPQ96T60 521 aa12.88□□□□□ -0.35
RNF40-211ENST00000567365 IER2Q9BTL4 223 aa12.88□□□□□ -0.35
RNF40-211ENST00000567365 ANP32EQ9BTT0 268 aa12.88□□□□□ -0.35
RNF40-211ENST00000567365 BBS2Q9BXC9 721 aa12.88□□□□□ -0.35
RNF40-211ENST00000567365 RAB6CQ9H0N0 254 aa12.88□□□□□ -0.35
RNF40-211ENST00000567365 TMEM51Q9NW97 253 aa12.88□□□□□ -0.35
RNF40-211ENST00000567365 STAP1Q9ULZ2 295 aa12.88□□□□□ -0.35
RNF40-211ENST00000567365 SLC27A6Q9Y2P4 619 aa12.88□□□□□ -0.35
RNF40-211ENST00000567365 SSU72P8A0A1W2PR75 194 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.87□□□□□ -0.35
RNF40-211ENST00000567365 CHURC1-FNTBB4DL54 471 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 NEDD8-MDP1E9PL57 170 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 KAT7O95251 611 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 F9P00740 461 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 SLC2A3P11169 496 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 TDGF1P13385 188 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 PDGFRAP16234 1089 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 FECHP22830 423 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 EIF4A3P38919 411 aaKnown RBP12.87□□□□□ -0.35
RNF40-211ENST00000567365 SLC11A2P49281 568 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 SULT1E1P49888 294 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 ADKP55263 362 aaKnown RBP12.87□□□□□ -0.35
RNF40-211ENST00000567365 OGDHQ02218 1023 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 MTAPQ13126 283 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 MAMLD1Q13495 774 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 LRRC32Q14392 662 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 C5orf22Q49AR2 442 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 FBXO43Q4G163 708 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 MPPE1Q53F39 396 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 BRMS1LQ5PSV4 323 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 MPP7Q5T2T1 576 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 SH3PXD2AQ5TCZ1 1133 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 DNAJC24Q6P3W2 148 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 PKN3Q6P5Z2 889 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 RFWD3Q6PCD5 774 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 STRADAQ7RTN6 431 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 TMC6Q7Z403 805 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 KIAA0907Q7Z7F0 614 aaPredicted RBP12.87□□□□□ -0.35
RNF40-211ENST00000567365 NAT16Q8N8M0 369 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 CHP1Q99653 195 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 SLC2A11Q9BYW1 496 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 C2orf42Q9NWW7 574 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 PLK2Q9NYY3 685 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 DEC1Q9P2X7 70 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 STARD13Q9Y3M8 1113 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 WDR87Q6ZQQ6 2873 aa12.87□□□□□ -0.35
RNF40-211ENST00000567365 FANCMQ8IYD8 2048 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 TMEM191CA6NGB0 347 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 TMCO5BA8MYB1 307 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 PAGE1O75459 146 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 PAPSS2O95340 614 aaPredicted RBP12.86□□□□□ -0.35
RNF40-211ENST00000567365 MOCS2O96007 188 aaPredicted RBP12.86□□□□□ -0.35
RNF40-211ENST00000567365 APOEP02649 317 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 GRIA2P42262 883 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 TNFRSF4P43489 277 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 KIR2DL1P43626 348 aaPredicted RBP12.86□□□□□ -0.35
RNF40-211ENST00000567365 ZNF143P52747 638 aaPredicted RBP12.86□□□□□ -0.35
RNF40-211ENST00000567365 HDAC4P56524 1084 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 DEUP1Q05D60 604 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 ZNF252P-AS1Q0IIN9 211 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 NME3Q13232 169 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 MTA1Q13330 715 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 C15orf59Q2T9L4 293 aaPredicted RBP12.86□□□□□ -0.35
RNF40-211ENST00000567365 CNGA4Q8IV77 575 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 C1orf210Q8IVY1 113 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.86□□□□□ -0.35
RNF40-211ENST00000567365 ATP6V0D2Q8N8Y2 350 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 WFDC5Q8TCV5 224 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 USP33Q8TEY7 942 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 NELL1Q92832 810 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 EXOC4Q96A65 974 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 TMA16Q96EY4 203 aaKnown RBP12.86□□□□□ -0.35
RNF40-211ENST00000567365 XPO6Q96QU8 1125 aaKnown RBP12.86□□□□□ -0.35
RNF40-211ENST00000567365 SELENOOQ9BVL4 669 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 PRMT8Q9NR22 394 aaPredicted RBP12.86□□□□□ -0.35
RNF40-211ENST00000567365 ARHGEF4Q9NR80 690 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 PARVAQ9NVD7 372 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 DNAJC17Q9NVM6 304 aaKnown RBP12.86□□□□□ -0.35
RNF40-211ENST00000567365 DOCK4Q8N1I0 1966 aa12.86□□□□□ -0.35
RNF40-211ENST00000567365 MUC22E2RYF6 1773 aaPredicted RBP12.85□□□□□ -0.35
RNF40-211ENST00000567365 PRRT4C9JH25 899 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 AKR1B15C9JRZ8 316 aaPredicted RBP12.85□□□□□ -0.35
RNF40-211ENST00000567365 ATMINO43313 823 aaPredicted RBP12.85□□□□□ -0.35
RNF40-211ENST00000567365 TSPAN3O60637 253 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 RNF40O75150 1001 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 MYBL1P10243 752 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 TACR2P21452 398 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms