RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 NAT16Q8N8M0 369 aa27.1■■□□□ 1.93
NME3-209ENST00000566600 TC2NQ8N9U0 490 aa27.1■■□□□ 1.93
NME3-209ENST00000566600 MCEEQ96PE7 176 aa27.1■■□□□ 1.93
NME3-209ENST00000566600 FBRSL1Q9HCM7 1045 aaKnown RBP27.1■■□□□ 1.93
NME3-209ENST00000566600 MRPL47Q9HD33 250 aaKnown RBP27.1■■□□□ 1.93
NME3-209ENST00000566600 DNAJC17Q9NVM6 304 aaKnown RBP27.1■■□□□ 1.93
NME3-209ENST00000566600 DLGAP2Q9P1A6 1054 aa27.1■■□□□ 1.93
NME3-209ENST00000566600 CNOT8Q9UFF9 292 aaKnown RBP27.1■■□□□ 1.93
NME3-209ENST00000566600 GFRA2O00451 464 aa27.09■■□□□ 1.93
NME3-209ENST00000566600 AKR1B10O60218 316 aa27.09■■□□□ 1.93
NME3-209ENST00000566600 TSPAN3O60637 253 aa27.09■■□□□ 1.93
NME3-209ENST00000566600 APODP05090 189 aa27.09■■□□□ 1.93
NME3-209ENST00000566600 GRIA2P42262 883 aa27.09■■□□□ 1.93
NME3-209ENST00000566600 ZNF143P52747 638 aaPredicted RBP27.09■■□□□ 1.93
NME3-209ENST00000566600 ATP11AP98196 1134 aa27.09■■□□□ 1.93
NME3-209ENST00000566600 MPP7Q5T2T1 576 aa27.09■■□□□ 1.93
NME3-209ENST00000566600 NAIF1Q69YI7 327 aaPredicted RBP27.09■■□□□ 1.93
NME3-209ENST00000566600 NADSYN1Q6IA69 706 aa27.09■■□□□ 1.93
NME3-209ENST00000566600 GRAMD4Q6IC98 578 aa27.09■■□□□ 1.93
NME3-209ENST00000566600 C12orf40Q86WS4 652 aa27.09■■□□□ 1.93
NME3-209ENST00000566600 BHMTQ93088 406 aa27.09■■□□□ 1.93
NME3-209ENST00000566600 CCDC42Q96M95 316 aa27.09■■□□□ 1.93
NME3-209ENST00000566600 SLC2A11Q9BYW1 496 aa27.09■■□□□ 1.93
NME3-209ENST00000566600 ADAM33Q9BZ11 813 aa27.09■■□□□ 1.93
NME3-209ENST00000566600 ARHGEF4Q9NR80 690 aa27.09■■□□□ 1.93
NME3-209ENST00000566600 ARHGEF38Q9NXL2 777 aa27.09■■□□□ 1.93
NME3-209ENST00000566600 CALCOCO1Q9P1Z2 691 aa27.09■■□□□ 1.93
NME3-209ENST00000566600 GOLGA6L7A0A1B0GV03 622 aa27.08■■□□□ 1.93
NME3-209ENST00000566600 KAT7O95251 611 aa27.08■■□□□ 1.93
NME3-209ENST00000566600 ADCY5O95622 1261 aa27.08■■□□□ 1.93
NME3-209ENST00000566600 SLC6A4P31645 630 aa27.08■■□□□ 1.93
NME3-209ENST00000566600 MS4A13Q5J8X5 152 aa27.08■■□□□ 1.93
NME3-209ENST00000566600 PIK3R6Q5UE93 754 aa27.08■■□□□ 1.93
NME3-209ENST00000566600 CHSY1Q86X52 802 aa27.08■■□□□ 1.93
NME3-209ENST00000566600 HJURPQ8NCD3 748 aaPredicted RBP27.08■■□□□ 1.93
NME3-209ENST00000566600 CENPIQ92674 756 aaPredicted RBP27.08■■□□□ 1.93
NME3-209ENST00000566600 TKTL2Q9H0I9 626 aa27.08■■□□□ 1.93
NME3-209ENST00000566600 CHRDQ9H2X0 955 aa27.08■■□□□ 1.93
NME3-209ENST00000566600 NHEJ1Q9H9Q4 299 aaPredicted RBP27.08■■□□□ 1.93
NME3-209ENST00000566600 PLK2Q9NYY3 685 aa27.08■■□□□ 1.93
NME3-209ENST00000566600 KMT2EQ8IZD2 1858 aa27.08■■□□□ 1.93
NME3-209ENST00000566600 A0A0A0MRY4 1105 aa27.07■■□□□ 1.92
NME3-209ENST00000566600 EGFP01133 1207 aa27.07■■□□□ 1.92
NME3-209ENST00000566600 TACR2P21452 398 aa27.07■■□□□ 1.92
NME3-209ENST00000566600 DGKGP49619 791 aa27.07■■□□□ 1.92
NME3-209ENST00000566600 RPL7AP62424 266 aaKnown RBP27.07■■□□□ 1.92
NME3-209ENST00000566600 GFPT1Q06210 699 aaPredicted RBP27.07■■□□□ 1.92
NME3-209ENST00000566600 ASTE1Q2TB18 679 aaPredicted RBP27.07■■□□□ 1.92
NME3-209ENST00000566600 RFWD3Q6PCD5 774 aa27.07■■□□□ 1.92
NME3-209ENST00000566600 ZNF557Q8N988 423 aaPredicted RBP27.07■■□□□ 1.92
NME3-209ENST00000566600 DTWD2Q8NBA8 298 aa27.07■■□□□ 1.92
NME3-209ENST00000566600 CHP1Q99653 195 aa27.07■■□□□ 1.92
NME3-209ENST00000566600 PRRX2Q99811 253 aa27.07■■□□□ 1.92
NME3-209ENST00000566600 CNPY3Q9BT09 278 aa27.07■■□□□ 1.92
NME3-209ENST00000566600 XPO7Q9UIA9 1087 aaKnown RBP27.07■■□□□ 1.92
NME3-209ENST00000566600 FBXO10Q9UK96 956 aa27.07■■□□□ 1.92
NME3-209ENST00000566600 NENFQ9UMX5 172 aa27.07■■□□□ 1.92
NME3-209ENST00000566600 F5H5T6 163 aa27.06■■□□□ 1.92
NME3-209ENST00000566600 ATMINO43313 823 aaPredicted RBP27.06■■□□□ 1.92
NME3-209ENST00000566600 PAGE1O75459 146 aa27.06■■□□□ 1.92
NME3-209ENST00000566600 TNFRSF4P43489 277 aa27.06■■□□□ 1.92
NME3-209ENST00000566600 KDSRQ06136 332 aa27.06■■□□□ 1.92
NME3-209ENST00000566600 CDO1Q16878 200 aa27.06■■□□□ 1.92
NME3-209ENST00000566600 C15orf59Q2T9L4 293 aaPredicted RBP27.06■■□□□ 1.92
NME3-209ENST00000566600 ARL13BQ3SXY8 428 aa27.06■■□□□ 1.92
NME3-209ENST00000566600 RAP1GAP2Q684P5 730 aa27.06■■□□□ 1.92
NME3-209ENST00000566600 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.06■■□□□ 1.92
NME3-209ENST00000566600 DNAAF5Q86Y56 855 aa27.06■■□□□ 1.92
NME3-209ENST00000566600 PHTF2Q8N3S3 785 aa27.06■■□□□ 1.92
NME3-209ENST00000566600 FAM172AQ8WUF8 416 aa27.06■■□□□ 1.92
NME3-209ENST00000566600 PANX2Q96RD6 677 aa27.06■■□□□ 1.92
NME3-209ENST00000566600 RBM12Q9NTZ6 932 aaKnown RBP27.06■■□□□ 1.92
NME3-209ENST00000566600 KIAA1549LQ6ZVL6 1849 aa27.06■■□□□ 1.92
NME3-209ENST00000566600 TMEM191CA6NGB0 347 aa27.05■■□□□ 1.92
NME3-209ENST00000566600 HOXD9P28356 352 aaPredicted RBP27.05■■□□□ 1.92
NME3-209ENST00000566600 LGI2Q8N0V4 545 aa27.05■■□□□ 1.92
NME3-209ENST00000566600 TERB1Q8NA31 727 aa27.05■■□□□ 1.92
NME3-209ENST00000566600 PRMT1Q99873 361 aaKnown RBP27.05■■□□□ 1.92
NME3-209ENST00000566600 IMPACTQ9P2X3 320 aa27.05■■□□□ 1.92
NME3-209ENST00000566600 MYO1AQ9UBC5 1043 aa27.05■■□□□ 1.92
NME3-209ENST00000566600 SLC27A6Q9Y2P4 619 aa27.05■■□□□ 1.92
NME3-209ENST00000566600 TBC1D3BA6NDS4 549 aa27.04■■□□□ 1.92
NME3-209ENST00000566600 TBL1XO60907 577 aa27.04■■□□□ 1.92
NME3-209ENST00000566600 ATG13O75143 517 aa27.04■■□□□ 1.92
NME3-209ENST00000566600 CISD3P0C7P0 127 aa27.04■■□□□ 1.92
NME3-209ENST00000566600 RABGAP1LQ5R372 815 aa27.04■■□□□ 1.92
NME3-209ENST00000566600 TTC39BQ5VTQ0 682 aaPredicted RBP27.04■■□□□ 1.92
NME3-209ENST00000566600 MAMSTRQ6ZN01 415 aa27.04■■□□□ 1.92
NME3-209ENST00000566600 FAM131BQ86XD5 332 aa27.04■■□□□ 1.92
NME3-209ENST00000566600 CCDC117Q8IWD4 279 aaPredicted RBP27.04■■□□□ 1.92
NME3-209ENST00000566600 FNIP1Q8TF40 1166 aa27.04■■□□□ 1.92
NME3-209ENST00000566600 C1orf74Q96LT6 269 aa27.04■■□□□ 1.92
NME3-209ENST00000566600 HAPLN3Q96S86 360 aa27.04■■□□□ 1.92
NME3-209ENST00000566600 THAP2Q9H0W7 228 aa27.04■■□□□ 1.92
NME3-209ENST00000566600 ZNF318Q5VUA4 2279 aa27.04■■□□□ 1.92
NME3-209ENST00000566600 GOLGA6L6A8MZA4 724 aa27.03■■□□□ 1.92
NME3-209ENST00000566600 CCP110O43303 1012 aa27.03■■□□□ 1.92
NME3-209ENST00000566600 ATXN1P54253 815 aaKnown RBP27.03■■□□□ 1.92
NME3-209ENST00000566600 GALCP54803 685 aa27.03■■□□□ 1.92
NME3-209ENST00000566600 SH3PXD2AQ5TCZ1 1133 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms