RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 TRPC5Q9UL62 973 aaPredicted RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 MAFFQ9ULX9 164 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 CAPN11Q9UMQ6 739 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 UNC13AQ9UPW8 1703 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 SHOC2Q9UQ13 582 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 CDYLQ9Y232 598 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 MRPS17Q9Y2R5 130 aaKnown RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 POMT1Q9Y6A1 747 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 CCDC180Q9P1Z9 1646 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 RUSC2Q8N2Y8 1516 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 TEX13CA0A0J9YWL9 993 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 A0A0U1RQK1 487 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 hCG_1809904A0A1W2PP81 198 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 A0A1W2PPE2 198 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 A0A1W2PR64 198 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 ZNF320A2RRD8 509 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 SH2D7A6NKC9 451 aaPredicted RBP3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 CXorf49A8MYA2 514 aaPredicted RBP3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 TMEM232C9JQI7 657 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 E9PLN8 166 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 M0QYT0 321 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 OVOL3O00110 214 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 CTDSP2O14595 271 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 DCLK1O15075 740 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 STAM2O75886 525 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 LARGE1O95461 756 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 CHEK2O96017 543 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 PLATP00750 562 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 MYBL1P10243 752 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 CYP2C9P11712 490 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 PNLIPP16233 465 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 IFNAR1P17181 557 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 HK1P19367 917 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 DRD1P21728 446 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 CSF2RBP32927 897 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 CIITAP33076 1130 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 GSTM5P46439 218 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 NRIP1P48552 1158 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 AMPHP49418 695 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 MEOX1P50221 254 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 PGDP52209 483 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 RRADP55042 308 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 CDH8P55286 799 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 FAM3BP58499 235 aaPredicted RBP3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 KRTAP1-1Q07627 177 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 GOLGA8FQ08AF8 430 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 TMEM62Q0P6H9 643 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 TBL3Q12788 808 aaKnown RBP3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 TFCP2Q12800 502 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 TMEM115Q12893 351 aaPredicted RBP3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 IRF3Q14653 427 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 KCNB1Q14721 858 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 CRYMQ14894 314 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 PPA1Q15181 289 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 RUNDC3AQ59EK9 446 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 METTL24Q5JXM2 366 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 CBWD5Q5RIA9 395 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 GARNL3Q5VVW2 1013 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 ADALQ6DHV7 355 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 OTUD7BQ6GQQ9 843 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 GALNT17Q6IS24 598 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 MSANTD2Q6P1R3 559 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 TMEM154Q6P9G4 183 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 INO80CQ6PI98 192 aaPredicted RBP3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 SLC2A7Q6PXP3 512 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 CLEC9AQ6UXN8 241 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 UNC5DQ6UXZ4 953 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 CHST9Q7L1S5 443 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 CXXC5Q7LFL8 322 aaKnown RBP3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 PLPPR4Q7Z2D5 763 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 GPRIN1Q7Z2K8 1008 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 NLRX1Q86UT6 975 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 MON1AQ86VX9 555 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 NLRP14Q86W24 1093 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 SCN4BQ8IWT1 228 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 KIAA2013Q8IYS2 634 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 TEX9Q8N6V9 391 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 C11orf44Q8N8P7 122 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 NSUN7Q8NE18 718 aaKnown RBP3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 NLGN4YQ8NFZ3 816 aaPredicted RBP3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 RFWD2Q8NHY2 731 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 ZCCHC10Q8TBK6 192 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 PIGOQ8TEQ8 1089 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 GFM2Q969S9 779 aaKnown RBP3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 EXOC4Q96A65 974 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 KLHL29Q96CT2 875 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 RMDN1Q96DB5 314 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 FAM227BQ96M60 508 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 CCDC43Q96MW1 224 aaKnown RBP3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 PWWP2AQ96N64 755 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 KLHL32Q96NJ5 620 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 GCNAQ96QF7 691 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 NR1H4Q96RI1 486 aaPredicted RBP3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 TMEM209Q96SK2 561 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 VKORC1Q9BQB6 163 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 MESP1Q9BRJ9 268 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 DNAI2Q9GZS0 605 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 SLC32A1Q9H598 525 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 TRPV4Q9HBA0 871 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 BARX1Q9HBU1 254 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms