RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 CREBRFQ8IUR6 639 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 SCUBE3Q8IX30 993 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 MLKLQ8NB16 471 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 ZNF606Q8WXB4 792 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 SORCS1Q8WY21 1168 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 PRCCQ92733 491 aaPredicted RBP20.98■□□□□ 0.95
CLN6-207ENST00000566347 FAM149B1Q96BN6 582 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 SIPA1Q96FS4 1042 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 CD93Q9NPY3 652 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 ITM2CQ9NQX7 267 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 ABCB8Q9NUT2 735 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 GGA2Q9UJY4 613 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 ANGPTL2Q9UKU9 493 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 PLA2G4CQ9UP65 541 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 TLR6Q9Y2C9 796 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 EPG5Q9HCE0 2579 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 CHD8Q9HCK8 2581 aa20.98■□□□□ 0.95
CLN6-207ENST00000566347 TYW5A2RUC4 315 aaKnown RBP20.97■□□□□ 0.95
CLN6-207ENST00000566347 LETM1O95202 739 aaPredicted RBP20.97■□□□□ 0.95
CLN6-207ENST00000566347 FYNP06241 537 aa20.97■□□□□ 0.95
CLN6-207ENST00000566347 PABPC1P11940 636 aaKnown RBP20.97■□□□□ 0.95
CLN6-207ENST00000566347 CEACAM1P13688 526 aa20.97■□□□□ 0.95
CLN6-207ENST00000566347 GNA15P30679 374 aa20.97■□□□□ 0.95
CLN6-207ENST00000566347 MAPK8P45983 427 aa20.97■□□□□ 0.95
CLN6-207ENST00000566347 FAM133BQ5BKY9 247 aaKnown RBP20.97■□□□□ 0.95
CLN6-207ENST00000566347 WDR45BQ5MNZ6 344 aa20.97■□□□□ 0.95
CLN6-207ENST00000566347 SH3PXD2AQ5TCZ1 1133 aa20.97■□□□□ 0.95
CLN6-207ENST00000566347 SMYD5Q6GMV2 418 aa20.97■□□□□ 0.95
CLN6-207ENST00000566347 DENND1BQ6P3S1 775 aa20.97■□□□□ 0.95
CLN6-207ENST00000566347 GBP6Q6ZN66 633 aa20.97■□□□□ 0.95
CLN6-207ENST00000566347 CHST9Q7L1S5 443 aa20.97■□□□□ 0.95
CLN6-207ENST00000566347 KIAA0907Q7Z7F0 614 aaPredicted RBP20.97■□□□□ 0.95
CLN6-207ENST00000566347 DQX1Q8TE96 717 aaKnown RBP20.97■□□□□ 0.95
CLN6-207ENST00000566347 CRACR2AQ9BSW2 395 aa20.97■□□□□ 0.95
CLN6-207ENST00000566347 SLC4A5Q9BY07 1137 aa20.97■□□□□ 0.95
CLN6-207ENST00000566347 CAPN10Q9HC96 672 aa20.97■□□□□ 0.95
CLN6-207ENST00000566347 SUSD2Q9UGT4 822 aa20.97■□□□□ 0.95
CLN6-207ENST00000566347 ASCC3Q8N3C0 2202 aaKnown RBP20.97■□□□□ 0.95
CLN6-207ENST00000566347 GTPBP10A4D1E9 387 aaKnown RBP20.96■□□□□ 0.95
CLN6-207ENST00000566347 THAP12O43422 761 aa20.96■□□□□ 0.95
CLN6-207ENST00000566347 TBL1XO60907 577 aa20.96■□□□□ 0.95
CLN6-207ENST00000566347 ATP5BP06576 529 aaKnown RBP20.96■□□□□ 0.95
CLN6-207ENST00000566347 ACADMP11310 421 aa20.96■□□□□ 0.95
CLN6-207ENST00000566347 SGSHP51688 502 aa20.96■□□□□ 0.95
CLN6-207ENST00000566347 FNDC3BQ53EP0 1204 aaKnown RBP20.96■□□□□ 0.95
CLN6-207ENST00000566347 RFWD3Q6PCD5 774 aa20.96■□□□□ 0.95
CLN6-207ENST00000566347 ADIPOR2Q86V24 386 aa20.96■□□□□ 0.95
CLN6-207ENST00000566347 RGL4Q8IZJ4 473 aa20.96■□□□□ 0.95
CLN6-207ENST00000566347 HJURPQ8NCD3 748 aaPredicted RBP20.96■□□□□ 0.95
CLN6-207ENST00000566347 TOE1Q96GM8 510 aaKnown RBP20.96■□□□□ 0.95
CLN6-207ENST00000566347 FCRL2Q96LA5 508 aaPredicted RBP20.96■□□□□ 0.95
CLN6-207ENST00000566347 MED15Q96RN5 788 aa20.96■□□□□ 0.95
CLN6-207ENST00000566347 WSB2Q9NYS7 404 aaPredicted RBP20.96■□□□□ 0.95
CLN6-207ENST00000566347 APEX2Q9UBZ4 518 aa20.96■□□□□ 0.95
CLN6-207ENST00000566347 NAALADL1Q9UQQ1 740 aa20.96■□□□□ 0.95
CLN6-207ENST00000566347 NFE2L3Q9Y4A8 694 aa20.96■□□□□ 0.95
CLN6-207ENST00000566347 GOLGA6L7A0A1B0GV03 622 aa20.95■□□□□ 0.94
CLN6-207ENST00000566347 CAPN9O14815 690 aa20.95■□□□□ 0.94
CLN6-207ENST00000566347 IGLV3-19P01714 112 aa20.95■□□□□ 0.94
CLN6-207ENST00000566347 SYPP08247 313 aa20.95■□□□□ 0.94
CLN6-207ENST00000566347 GNSP15586 552 aa20.95■□□□□ 0.94
CLN6-207ENST00000566347 SLC9A1P19634 815 aa20.95■□□□□ 0.94
CLN6-207ENST00000566347 SLC6A4P31645 630 aa20.95■□□□□ 0.94
CLN6-207ENST00000566347 TPMTP51580 245 aa20.95■□□□□ 0.94
CLN6-207ENST00000566347 COPAP53621 1224 aa20.95■□□□□ 0.94
CLN6-207ENST00000566347 SHC2P98077 582 aa20.95■□□□□ 0.94
CLN6-207ENST00000566347 CAMK2GQ13555 558 aaPredicted RBP20.95■□□□□ 0.94
CLN6-207ENST00000566347 EXOC3L4Q17RC7 722 aa20.95■□□□□ 0.94
CLN6-207ENST00000566347 TMEM110Q86TL2 294 aa20.95■□□□□ 0.94
CLN6-207ENST00000566347 CADM4Q8NFZ8 388 aa20.95■□□□□ 0.94
CLN6-207ENST00000566347 OR2T3Q8NH03 318 aa20.95■□□□□ 0.94
CLN6-207ENST00000566347 TMEM245Q9H330 911 aa20.95■□□□□ 0.94
CLN6-207ENST00000566347 FBRSQ9HAH7 460 aa20.95■□□□□ 0.94
CLN6-207ENST00000566347 E5RJQ4 531 aa20.94■□□□□ 0.94
CLN6-207ENST00000566347 ARHGAP33O14559 1287 aa20.94■□□□□ 0.94
CLN6-207ENST00000566347 DLDP09622 509 aaKnown RBP20.94■□□□□ 0.94
CLN6-207ENST00000566347 POLR2EP19388 210 aaKnown RBP20.94■□□□□ 0.94
CLN6-207ENST00000566347 USP8P40818 1118 aa20.94■□□□□ 0.94
CLN6-207ENST00000566347 MTIF2P46199 727 aaKnown RBP20.94■□□□□ 0.94
CLN6-207ENST00000566347 TPD52L1Q16890 204 aaPredicted RBP20.94■□□□□ 0.94
CLN6-207ENST00000566347 ARHGAP44Q17R89 818 aa20.94■□□□□ 0.94
CLN6-207ENST00000566347 MBLAC2Q68D91 279 aa20.94■□□□□ 0.94
CLN6-207ENST00000566347 NADSYN1Q6IA69 706 aa20.94■□□□□ 0.94
CLN6-207ENST00000566347 GJB7Q6PEY0 223 aa20.94■□□□□ 0.94
CLN6-207ENST00000566347 IRF2BP1Q8IU81 584 aa20.94■□□□□ 0.94
CLN6-207ENST00000566347 MFN1Q8IWA4 741 aa20.94■□□□□ 0.94
CLN6-207ENST00000566347 CCDC117Q8IWD4 279 aaPredicted RBP20.94■□□□□ 0.94
CLN6-207ENST00000566347 HDDC3Q8N4P3 179 aa20.94■□□□□ 0.94
CLN6-207ENST00000566347 CYB5D2Q8WUJ1 264 aa20.94■□□□□ 0.94
CLN6-207ENST00000566347 SLC39A13Q96H72 371 aa20.94■□□□□ 0.94
CLN6-207ENST00000566347 NUP58Q9BVL2 599 aa20.94■□□□□ 0.94
CLN6-207ENST00000566347 GTPBP2Q9BX10 602 aaKnown RBP20.94■□□□□ 0.94
CLN6-207ENST00000566347 SLC32A1Q9H598 525 aa20.94■□□□□ 0.94
CLN6-207ENST00000566347 THAP9Q9H5L6 903 aa20.94■□□□□ 0.94
CLN6-207ENST00000566347 POPDC2Q9HBU9 364 aa20.94■□□□□ 0.94
CLN6-207ENST00000566347 PCDH15Q96QU1 1955 aa20.94■□□□□ 0.94
CLN6-207ENST00000566347 CACNA1EQ15878 2313 aa20.93■□□□□ 0.94
CLN6-207ENST00000566347 MUC22E2RYF6 1773 aaPredicted RBP20.93■□□□□ 0.94
CLN6-207ENST00000566347 MEI4A8MW99 385 aa20.93■□□□□ 0.94
CLN6-207ENST00000566347 UPK3BL1B0FP48 263 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms