RNA–Protein interactions for RNA: ENST00000565628.1

SPIRE2-208, Transcript of spire type actin nucleation factor 2, humanhuman

TSL 3

Gene SPIRE2, Length 505 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-208ENST00000565628 PHF13Q86YI8 300 aaPredicted RBP15.17■□□□□ 0.02
SPIRE2-208ENST00000565628 PGAP3Q96FM1 320 aaPredicted RBP15.17■□□□□ 0.02
SPIRE2-208ENST00000565628 PIWIL1Q96J94 861 aaKnown RBP15.17■□□□□ 0.02
SPIRE2-208ENST00000565628 WDCPQ9H6R7 721 aa15.17■□□□□ 0.02
SPIRE2-208ENST00000565628 AIPL1Q9NZN9 384 aa15.17■□□□□ 0.02
SPIRE2-208ENST00000565628 COX16Q9P0S2 106 aa15.17■□□□□ 0.02
SPIRE2-208ENST00000565628 PLA2G4CQ9UP65 541 aa15.17■□□□□ 0.02
SPIRE2-208ENST00000565628 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.17■□□□□ 0.02
SPIRE2-208ENST00000565628 TICRRQ7Z2Z1 1910 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 A0A1W2PQJ5 194 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 LRRC53A6NM62 1247 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 AXIN1O15169 862 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 TBL1XO60907 577 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 ATP5BP06576 529 aaKnown RBP15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 HOXD9P28356 352 aaPredicted RBP15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 SULT1E1P49888 294 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 DEUP1Q05D60 604 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 C1QBPQ07021 282 aaKnown RBP15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 EIF4EBP2Q13542 120 aaPredicted RBP15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 CDH18Q13634 790 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 SIM2Q14190 667 aaPredicted RBP15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 STARD3Q14849 445 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 USP39Q53GS9 565 aaKnown RBP15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 FAM133BQ5BKY9 247 aaKnown RBP15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 MS4A13Q5J8X5 152 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 EMC10Q5UCC4 262 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 PKN3Q6P5Z2 889 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 RFWD3Q6PCD5 774 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 CEP68Q76N32 757 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 IRF2BP2Q7Z5L9 587 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 ALYREFQ86V81 257 aaKnown RBP15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 CHSY1Q86X52 802 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 MFN1Q8IWA4 741 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 SLC30A5Q8TAD4 765 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 BAP1Q92560 729 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 NT5C3BQ969T7 300 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 VCPIP1Q96JH7 1222 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 NPY6RQ99463 290 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 C11orf70Q9BRQ4 267 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 CIPCQ9C0C6 399 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 EPC1Q9H2F5 836 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 ELOVL2Q9NXB9 296 aa15.16■□□□□ 0.02
SPIRE2-208ENST00000565628 DENND4CQ5VZ89 1909 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 ANAPC1Q9H1A4 1944 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 COL4A2P08572 1712 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 OBSL1O75147 1896 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 TRIM24O15164 1050 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 MOCS3O95396 460 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 KRT3P12035 628 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 HNRNPLP14866 589 aaKnown RBP eCLIP15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 TACR2P21452 398 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 SDC4P31431 198 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 KLHL30Q0D2K2 578 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 MESP2Q0VG99 397 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 ARL13BQ3SXY8 428 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 ACAD10Q6JQN1 1059 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 LRRC31Q6UY01 552 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 LGI2Q8N0V4 545 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 AHI1Q8N157 1196 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 FIBINQ8TAL6 211 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 SYN2Q92777 582 aaPredicted RBP15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 HHIPQ96QV1 700 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 PHOX2BQ99453 314 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 SELENOOQ9BVL4 669 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 C2orf42Q9NWW7 574 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 IFNKQ9P0W0 207 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 STIM2Q9P246 746 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 BCCIPQ9P287 314 aaKnown RBP eCLIP15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 TMEM59LQ9UK28 342 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 LUC7L2Q9Y383 392 aaKnown RBP15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 COL4A3Q01955 1670 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 PATJQ8NI35 1801 aa15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 ZNF638Q14966 1978 aaKnown RBP15.15■□□□□ 0.02
SPIRE2-208ENST00000565628 KMT2EQ8IZD2 1858 aa15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 GOLGA6L7A0A1B0GV03 622 aa15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 PRR23AA6NEV1 266 aa15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 PRRT4C9JH25 899 aa15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 H0Y626 953 aa15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 SGK1O00141 431 aa15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 SYNCRIPO60506 623 aaKnown RBP15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 RPP40O75818 363 aaKnown RBP15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 TPM1P09493 284 aa15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 HOXB2P14652 356 aa15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 PDGFRAP16234 1089 aa15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 POLR2EP19388 210 aaKnown RBP15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 HOXD11P31277 338 aaPredicted RBP15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 SLC6A4P31645 630 aa15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 RDXP35241 583 aaKnown RBP15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 PRKCIP41743 596 aa15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 CXCR3P49682 368 aa15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 GSCP56915 257 aaPredicted RBP15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 ZBED6P86452 979 aa15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 TSR1Q2NL82 804 aaKnown RBP15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 C2CD6Q53TS8 623 aa15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 RAP1GAP2Q684P5 730 aa15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 NADSYN1Q6IA69 706 aa15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 PGBD3Q8N328 593 aa15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 C3orf20Q8ND61 904 aa15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 GAB3Q8WWW8 586 aa15.14■□□□□ 0.01
SPIRE2-208ENST00000565628 RUBCNQ92622 972 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms