RNA–Protein interactions for RNA: ENST00000565210.5

CDH11-211, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-211ENST00000565210 KIAA2013Q8IYS2 634 aa23.29■■□□□ 1.32
CDH11-211ENST00000565210 HMGB4Q8WW32 186 aa23.29■■□□□ 1.32
CDH11-211ENST00000565210 DDX1Q92499 740 aaKnown RBP23.29■■□□□ 1.32
CDH11-211ENST00000565210 TPSD1Q9BZJ3 242 aa23.29■■□□□ 1.32
CDH11-211ENST00000565210 CIPCQ9C0C6 399 aa23.29■■□□□ 1.32
CDH11-211ENST00000565210 ZDHHC4Q9NPG8 344 aa23.29■■□□□ 1.32
CDH11-211ENST00000565210 THAP10Q9P2Z0 257 aaPredicted RBP23.29■■□□□ 1.32
CDH11-211ENST00000565210 PLA2G4CQ9UP65 541 aa23.29■■□□□ 1.32
CDH11-211ENST00000565210 PAXBP1Q9Y5B6 917 aa23.29■■□□□ 1.32
CDH11-211ENST00000565210 GOLGA6L7A0A1B0GV03 622 aa23.28■■□□□ 1.32
CDH11-211ENST00000565210 ANTXRLA6NF34 631 aa23.28■■□□□ 1.32
CDH11-211ENST00000565210 DAB1O75553 588 aa23.28■■□□□ 1.32
CDH11-211ENST00000565210 GRAP2O75791 330 aa23.28■■□□□ 1.32
CDH11-211ENST00000565210 IGLV3-25P01717 112 aa23.28■■□□□ 1.32
CDH11-211ENST00000565210 ATP5BP06576 529 aaKnown RBP23.28■■□□□ 1.32
CDH11-211ENST00000565210 MMEP08473 750 aa23.28■■□□□ 1.32
CDH11-211ENST00000565210 CHRM1P11229 460 aaPredicted RBP23.28■■□□□ 1.32
CDH11-211ENST00000565210 HOXC13P31276 330 aa23.28■■□□□ 1.32
CDH11-211ENST00000565210 WASP42768 502 aa23.28■■□□□ 1.32
CDH11-211ENST00000565210 JAM2P57087 298 aa23.28■■□□□ 1.32
CDH11-211ENST00000565210 FAM133BQ5BKY9 247 aaKnown RBP23.28■■□□□ 1.32
CDH11-211ENST00000565210 RFWD3Q6PCD5 774 aa23.28■■□□□ 1.32
CDH11-211ENST00000565210 AHI1Q8N157 1196 aa23.28■■□□□ 1.32
CDH11-211ENST00000565210 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.28■■□□□ 1.32
CDH11-211ENST00000565210 USP18Q9UMW8 372 aa23.28■■□□□ 1.32
CDH11-211ENST00000565210 PCDHGA5Q9Y5G8 931 aa23.28■■□□□ 1.32
CDH11-211ENST00000565210 KCNU1A8MYU2 1149 aa23.27■■□□□ 1.32
CDH11-211ENST00000565210 SYNCRIPO60506 623 aaKnown RBP23.27■■□□□ 1.32
CDH11-211ENST00000565210 F9P00740 461 aa23.27■■□□□ 1.32
CDH11-211ENST00000565210 SDHBP21912 280 aa23.27■■□□□ 1.32
CDH11-211ENST00000565210 MATKP42679 507 aa23.27■■□□□ 1.32
CDH11-211ENST00000565210 PLK5Q496M5 336 aa23.27■■□□□ 1.32
CDH11-211ENST00000565210 MS4A13Q5J8X5 152 aa23.27■■□□□ 1.32
CDH11-211ENST00000565210 FAM102AQ5T9C2 384 aaPredicted RBP23.27■■□□□ 1.32
CDH11-211ENST00000565210 KBTBD6Q86V97 674 aa23.27■■□□□ 1.32
CDH11-211ENST00000565210 MFN1Q8IWA4 741 aa23.27■■□□□ 1.32
CDH11-211ENST00000565210 DHX40Q8IX18 779 aaKnown RBP23.27■■□□□ 1.32
CDH11-211ENST00000565210 HSD3B7Q9H2F3 369 aa23.27■■□□□ 1.32
CDH11-211ENST00000565210 CACNA2D2Q9NY47 1150 aa23.27■■□□□ 1.32
CDH11-211ENST00000565210 STIM2Q9P246 746 aa23.27■■□□□ 1.32
CDH11-211ENST00000565210 GGA2Q9UJY4 613 aa23.27■■□□□ 1.32
CDH11-211ENST00000565210 STON1Q9Y6Q2 735 aa23.27■■□□□ 1.32
CDH11-211ENST00000565210 KIAA1549LQ6ZVL6 1849 aa23.26■■□□□ 1.31
CDH11-211ENST00000565210 SYNJ2BP-COX16A0A087WUM0 186 aa23.26■■□□□ 1.31
CDH11-211ENST00000565210 F5H5T6 163 aa23.26■■□□□ 1.31
CDH11-211ENST00000565210 MAP3K13O43283 966 aa23.26■■□□□ 1.31
CDH11-211ENST00000565210 ZNF217O75362 1048 aa23.26■■□□□ 1.31
CDH11-211ENST00000565210 PABPC1P11940 636 aaKnown RBP23.26■■□□□ 1.31
CDH11-211ENST00000565210 ATP1A3P13637 1013 aa23.26■■□□□ 1.31
CDH11-211ENST00000565210 SLC6A4P31645 630 aa23.26■■□□□ 1.31
CDH11-211ENST00000565210 RNASE9P60153 205 aaKnown RBP23.26■■□□□ 1.31
CDH11-211ENST00000565210 CHST9Q7L1S5 443 aa23.26■■□□□ 1.31
CDH11-211ENST00000565210 CHSY1Q86X52 802 aa23.26■■□□□ 1.31
CDH11-211ENST00000565210 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.26■■□□□ 1.31
CDH11-211ENST00000565210 FIBINQ8TAL6 211 aa23.26■■□□□ 1.31
CDH11-211ENST00000565210 P2RY11Q96G91 374 aa23.26■■□□□ 1.31
CDH11-211ENST00000565210 ACOX2Q99424 681 aa23.26■■□□□ 1.31
CDH11-211ENST00000565210 ABCB8Q9NUT2 735 aa23.26■■□□□ 1.31
CDH11-211ENST00000565210 COX16Q9P0S2 106 aa23.26■■□□□ 1.31
CDH11-211ENST00000565210 HCN2Q9UL51 889 aa23.26■■□□□ 1.31
CDH11-211ENST00000565210 CLEC4EQ9ULY5 219 aa23.26■■□□□ 1.31
CDH11-211ENST00000565210 FAM186AA6NE01 2351 aa23.25■■□□□ 1.31
CDH11-211ENST00000565210 SYCE3A1L190 88 aa23.25■■□□□ 1.31
CDH11-211ENST00000565210 PRR5-ARHGAP8B1AHC4 643 aa23.25■■□□□ 1.31
CDH11-211ENST00000565210 M0QYT0 321 aa23.25■■□□□ 1.31
CDH11-211ENST00000565210 MOCS3O95396 460 aa23.25■■□□□ 1.31
CDH11-211ENST00000565210 POLR2EP19388 210 aaKnown RBP23.25■■□□□ 1.31
CDH11-211ENST00000565210 TACR2P21452 398 aa23.25■■□□□ 1.31
CDH11-211ENST00000565210 HLA-FP30511 346 aa23.25■■□□□ 1.31
CDH11-211ENST00000565210 NOMO3P69849 1222 aa23.25■■□□□ 1.31
CDH11-211ENST00000565210 ARHGAP8P85298 464 aa23.25■■□□□ 1.31
CDH11-211ENST00000565210 LMNB2Q03252 620 aa23.25■■□□□ 1.31
CDH11-211ENST00000565210 SPEM2Q0P670 501 aa23.25■■□□□ 1.31
CDH11-211ENST00000565210 NME3Q13232 169 aa23.25■■□□□ 1.31
CDH11-211ENST00000565210 EIF4EBP2Q13542 120 aaPredicted RBP23.25■■□□□ 1.31
CDH11-211ENST00000565210 CDH18Q13634 790 aa23.25■■□□□ 1.31
CDH11-211ENST00000565210 RABGAP1LQ5R372 815 aa23.25■■□□□ 1.31
CDH11-211ENST00000565210 ACBD5Q5T8D3 534 aaPredicted RBP23.25■■□□□ 1.31
CDH11-211ENST00000565210 TTC39BQ5VTQ0 682 aaPredicted RBP23.25■■□□□ 1.31
CDH11-211ENST00000565210 NAA35Q5VZE5 725 aa23.25■■□□□ 1.31
CDH11-211ENST00000565210 NADSYN1Q6IA69 706 aa23.25■■□□□ 1.31
CDH11-211ENST00000565210 APTXQ7Z2E3 356 aaKnown RBP23.25■■□□□ 1.31
CDH11-211ENST00000565210 LGI2Q8N0V4 545 aa23.25■■□□□ 1.31
CDH11-211ENST00000565210 OLIG1Q8TAK6 271 aa23.25■■□□□ 1.31
CDH11-211ENST00000565210 CPA5Q8WXQ8 436 aa23.25■■□□□ 1.31
CDH11-211ENST00000565210 PPP1R9BQ96SB3 815 aa23.25■■□□□ 1.31
CDH11-211ENST00000565210 NUCKS1Q9H1E3 243 aaKnown RBP23.25■■□□□ 1.31
CDH11-211ENST00000565210 RTN4Q9NQC3 1192 aaKnown RBP23.25■■□□□ 1.31
CDH11-211ENST00000565210 NOCTQ9UK39 431 aaKnown RBP23.25■■□□□ 1.31
CDH11-211ENST00000565210 RIF1Q5UIP0 2472 aaKnown RBP23.24■■□□□ 1.31
CDH11-211ENST00000565210 A0A1W2PQF6 199 aa23.24■■□□□ 1.31
CDH11-211ENST00000565210 H0Y626 953 aa23.24■■□□□ 1.31
CDH11-211ENST00000565210 EPHB6O15197 1021 aa23.24■■□□□ 1.31
CDH11-211ENST00000565210 EPN2O95208 641 aa23.24■■□□□ 1.31
CDH11-211ENST00000565210 SERPINC1P01008 464 aa23.24■■□□□ 1.31
CDH11-211ENST00000565210 CYP1A1P04798 512 aaPredicted RBP23.24■■□□□ 1.31
CDH11-211ENST00000565210 OXCT1P55809 520 aa23.24■■□□□ 1.31
CDH11-211ENST00000565210 CSRP2Q16527 193 aa23.24■■□□□ 1.31
CDH11-211ENST00000565210 SPDYCQ5MJ68 293 aa23.24■■□□□ 1.31
CDH11-211ENST00000565210 SERPINA13PQ6UXR4 307 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms