RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 LRRC63Q05C16 580 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 LRMPQ12912 555 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 HNRNPDQ14103 355 aaKnown RBP8.95□□□□□ -0.98
CAPN3-213ENST00000565173 TRIP6Q15654 476 aaKnown RBP8.95□□□□□ -0.98
CAPN3-213ENST00000565173 PIK3R6Q5UE93 754 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 DCAF12L1Q5VU92 463 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 MSANTD2Q6P1R3 559 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 LCLAT1Q6UWP7 414 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 SERPINA13PQ6UXR4 307 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 DBX2Q6ZNG2 339 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 CHCHD4Q8N4Q1 142 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 WFDC5Q8TCV5 224 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 RNF139Q8WU17 664 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 CYB5D2Q8WUJ1 264 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 KAT5Q92993 513 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 TMA16Q96EY4 203 aaKnown RBP8.95□□□□□ -0.98
CAPN3-213ENST00000565173 LMLNQ96KR4 655 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 IPO9Q96P70 1041 aaKnown RBP8.95□□□□□ -0.98
CAPN3-213ENST00000565173 TSG101Q99816 390 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 ZDHHC5Q9C0B5 715 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 IL21RQ9HBE5 538 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 CNGB3Q9NQW8 809 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 ABCB8Q9NUT2 735 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 HESX1Q9UBX0 185 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 ARMCX3Q9UH62 379 aaPredicted RBP8.95□□□□□ -0.98
CAPN3-213ENST00000565173 SLCO1B1Q9Y6L6 691 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 PKD1L2Q7Z442 2459 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 ZFYVE26Q68DK2 2539 aa8.95□□□□□ -0.98
CAPN3-213ENST00000565173 SMG1Q96Q15 3661 aaKnown RBP8.95□□□□□ -0.98
CAPN3-213ENST00000565173 MUC22E2RYF6 1773 aaPredicted RBP8.94□□□□□ -0.98
CAPN3-213ENST00000565173 GOLGA6L7A0A1B0GV03 622 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 MEI4A8MW99 385 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 TAF4O00268 1085 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 PIK3R2O00459 728 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 BCAT2O15382 392 aaPredicted RBP8.94□□□□□ -0.98
CAPN3-213ENST00000565173 FYNP06241 537 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 PAEPP09466 180 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 CD19P15391 556 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 BMP6P22004 513 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 TBXAS1P24557 533 aaPredicted RBP8.94□□□□□ -0.98
CAPN3-213ENST00000565173 SLC6A4P31645 630 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 ACSL1P33121 698 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 RGS7P49802 495 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 ZNF445P59923 1031 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 YWHAEP62258 255 aaKnown RBP8.94□□□□□ -0.98
CAPN3-213ENST00000565173 E2F5Q15329 346 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 CNGA2Q16280 664 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 ZNF423Q2M1K9 1284 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 FAM133BQ5BKY9 247 aaKnown RBP8.94□□□□□ -0.98
CAPN3-213ENST00000565173 MPP7Q5T2T1 576 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 TMEM270Q6UE05 265 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 CHST9Q7L1S5 443 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 SLCO6A1Q86UG4 719 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 CACUL1Q86Y37 369 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 NAXDQ8IW45 347 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 SIX6OS1Q8N1H7 587 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 ZCCHC9Q8N567 271 aaKnown RBP8.94□□□□□ -0.98
CAPN3-213ENST00000565173 ZNF366Q8N895 744 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 OR2T3Q8NH03 318 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 WFIKKN2Q8TEU8 576 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 CLEC4CQ8WTT0 213 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 IRGQQ8WZA9 623 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 MYEOVQ96EZ4 313 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 CCDC34Q96HJ3 373 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 TIGD1Q96MW7 591 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 MIR1-1HGQ9H1L0 117 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 C6orf106Q9H6K1 298 aaPredicted RBP8.94□□□□□ -0.98
CAPN3-213ENST00000565173 METTL14Q9HCE5 456 aaKnown RBP8.94□□□□□ -0.98
CAPN3-213ENST00000565173 PRSS16Q9NQE7 514 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 EIF2B4Q9UI10 523 aaKnown RBP8.94□□□□□ -0.98
CAPN3-213ENST00000565173 GGA2Q9UJY4 613 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.94□□□□□ -0.98
CAPN3-213ENST00000565173 PLA2G4CQ9UP65 541 aa8.94□□□□□ -0.98
CAPN3-213ENST00000565173 ANKRD11Q6UB99 2663 aaPredicted RBP8.93□□□□□ -0.98
CAPN3-213ENST00000565173 PPP1R3GB7ZBB8 358 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 SMC2O95347 1197 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 LTFP02788 710 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 DLDP09622 509 aaKnown RBP8.93□□□□□ -0.98
CAPN3-213ENST00000565173 ZNF883P0CG24 379 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 ACADMP11310 421 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 PABPC1P11940 636 aaKnown RBP8.93□□□□□ -0.98
CAPN3-213ENST00000565173 BRD2P25440 801 aaKnown RBP8.93□□□□□ -0.98
CAPN3-213ENST00000565173 CD70P32970 193 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 RPL34P49207 117 aaKnown RBP8.93□□□□□ -0.98
CAPN3-213ENST00000565173 RPS14P62263 151 aaKnown RBP8.93□□□□□ -0.98
CAPN3-213ENST00000565173 HLA-BQ31612 363 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 MBLAC2Q68D91 279 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 ISM2Q6H9L7 571 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 NADSYN1Q6IA69 706 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 TTI2Q6NXR4 508 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 RFWD3Q6PCD5 774 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 GLRX5Q86SX6 157 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 FAM124AQ86V42 546 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 UNC45BQ8IWX7 931 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 ELOA2Q8IYF1 753 aaPredicted RBP8.93□□□□□ -0.98
CAPN3-213ENST00000565173 AHI1Q8N157 1196 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 PNPLA1Q8N8W4 532 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 ADAMTS14Q8WXS8 1223 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 ZCCHC14Q8WYQ9 949 aaKnown RBP8.93□□□□□ -0.98
CAPN3-213ENST00000565173 SMARCE1Q969G3 411 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms