RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 RPS24P62847 133 aaKnown RBP15.3■□□□□ 0.04
USB1-210ENST00000565151 RPL6Q02878 288 aaKnown RBP15.3■□□□□ 0.04
USB1-210ENST00000565151 RING1Q06587 406 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 KCNMA1Q12791 1236 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 N4BP2L1Q5TBK1 243 aaPredicted RBP15.3■□□□□ 0.04
USB1-210ENST00000565151 SDE2Q6IQ49 451 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 GBP6Q6ZN66 633 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 SYT12Q8IV01 421 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 KNL1Q8NG31 2342 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 STK32AQ8WU08 396 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 MYO19Q96H55 970 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 SPACA7Q96KW9 195 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 ADAM33Q9BZ11 813 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 CIPCQ9C0C6 399 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 NUCKS1Q9H1E3 243 aaKnown RBP15.3■□□□□ 0.04
USB1-210ENST00000565151 TMEM245Q9H330 911 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 MTG2Q9H4K7 406 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 ST7Q9NRC1 585 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 LMBRD1Q9NUN5 540 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 ABCB8Q9NUT2 735 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 USP36Q9P275 1121 aaKnown RBP15.3■□□□□ 0.04
USB1-210ENST00000565151 APEX2Q9UBZ4 518 aa15.3■□□□□ 0.04
USB1-210ENST00000565151 INTS6Q9UL03 887 aaKnown RBP15.3■□□□□ 0.04
USB1-210ENST00000565151 FOXN3O00409 490 aaPredicted RBP15.29■□□□□ 0.04
USB1-210ENST00000565151 FGFR1OPO95684 399 aaKnown RBP15.29■□□□□ 0.04
USB1-210ENST00000565151 ZNF33AQ06730 810 aa15.29■□□□□ 0.04
USB1-210ENST00000565151 PDCLQ13371 301 aa15.29■□□□□ 0.04
USB1-210ENST00000565151 EXOC3L4Q17RC7 722 aa15.29■□□□□ 0.04
USB1-210ENST00000565151 TRIM61Q5EBN2 209 aa15.29■□□□□ 0.04
USB1-210ENST00000565151 FSCBQ5H9T9 825 aa15.29■□□□□ 0.04
USB1-210ENST00000565151 SPDYCQ5MJ68 293 aa15.29■□□□□ 0.04
USB1-210ENST00000565151 LYSMD4Q5XG99 296 aa15.29■□□□□ 0.04
USB1-210ENST00000565151 IL31Q6EBC2 164 aa15.29■□□□□ 0.04
USB1-210ENST00000565151 KIAA1324Q6UXG2 1013 aaKnown RBP15.29■□□□□ 0.04
USB1-210ENST00000565151 MMS22LQ6ZRQ5 1243 aa15.29■□□□□ 0.04
USB1-210ENST00000565151 CLEC17AQ6ZS10 378 aa15.29■□□□□ 0.04
USB1-210ENST00000565151 PASD1Q8IV76 773 aa15.29■□□□□ 0.04
USB1-210ENST00000565151 CFAP52Q8N1V2 620 aa15.29■□□□□ 0.04
USB1-210ENST00000565151 OR2I1PQ8NGU4 316 aa15.29■□□□□ 0.04
USB1-210ENST00000565151 AZIN2Q96A70 460 aa15.29■□□□□ 0.04
USB1-210ENST00000565151 ZNF419Q96HQ0 510 aaPredicted RBP15.29■□□□□ 0.04
USB1-210ENST00000565151 CNTNAP3BQ96NU0 1288 aa15.29■□□□□ 0.04
USB1-210ENST00000565151 CPXM1Q96SM3 734 aa15.29■□□□□ 0.04
USB1-210ENST00000565151 CNTNAP3Q9BZ76 1288 aa15.29■□□□□ 0.04
USB1-210ENST00000565151 ITM2CQ9NQX7 267 aa15.29■□□□□ 0.04
USB1-210ENST00000565151 SAMSN1Q9NSI8 373 aaKnown RBP15.29■□□□□ 0.04
USB1-210ENST00000565151 EVLQ9UI08 416 aaPredicted RBP15.29■□□□□ 0.04
USB1-210ENST00000565151 CHD8Q9HCK8 2581 aa15.29■□□□□ 0.04
USB1-210ENST00000565151 GTPBP10A4D1E9 387 aaKnown RBP15.28■□□□□ 0.04
USB1-210ENST00000565151 TBL1XO60907 577 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 KCNK5O95279 499 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 C7P10643 843 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 MAOBP27338 520 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 MTIF2P46199 727 aaKnown RBP15.28■□□□□ 0.04
USB1-210ENST00000565151 EIF4HQ15056 248 aaKnown RBP15.28■□□□□ 0.04
USB1-210ENST00000565151 MEA1Q16626 185 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 SLC23A3Q6PIS1 610 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 CHST9Q7L1S5 443 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 BEND5Q7L4P6 421 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 ENOSF1Q7L5Y1 443 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 METTL3Q86U44 580 aaKnown RBP15.28■□□□□ 0.04
USB1-210ENST00000565151 SLC47A2Q86VL8 602 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 CACUL1Q86Y37 369 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 TMPRSS6Q8IU80 811 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 HSPA12BQ96MM6 686 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 THAP9Q9H5L6 903 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 PRDM16Q9HAZ2 1276 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 CAPN10Q9HC96 672 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 STIM2Q9P246 746 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 GGA2Q9UJY4 613 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 DNAJC12Q9UKB3 198 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 TLR6Q9Y2C9 796 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 SLCO1B1Q9Y6L6 691 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 ACACBO00763 2458 aa15.28■□□□□ 0.04
USB1-210ENST00000565151 KMT2BQ9UMN6 2715 aaPredicted RBP15.28■□□□□ 0.04
USB1-210ENST00000565151 AKAP13Q12802 2813 aa15.27■□□□□ 0.04
USB1-210ENST00000565151 FAM170AA1A519 330 aa15.27■□□□□ 0.04
USB1-210ENST00000565151 IRAK2O43187 625 aa15.27■□□□□ 0.04
USB1-210ENST00000565151 ERBB2P04626 1255 aa15.27■□□□□ 0.04
USB1-210ENST00000565151 PABPC1P11940 636 aaKnown RBP15.27■□□□□ 0.04
USB1-210ENST00000565151 ENGP17813 658 aa15.27■□□□□ 0.04
USB1-210ENST00000565151 USP8P40818 1118 aa15.27■□□□□ 0.04
USB1-210ENST00000565151 TPMTP51580 245 aa15.27■□□□□ 0.04
USB1-210ENST00000565151 LMAN2Q12907 356 aa15.27■□□□□ 0.04
USB1-210ENST00000565151 CAMK2GQ13555 558 aaPredicted RBP15.27■□□□□ 0.04
USB1-210ENST00000565151 BYSLQ13895 437 aaKnown RBP15.27■□□□□ 0.04
USB1-210ENST00000565151 MAN2A1Q16706 1144 aa15.27■□□□□ 0.04
USB1-210ENST00000565151 ZC3H12AQ5D1E8 599 aaKnown RBP15.27■□□□□ 0.04
USB1-210ENST00000565151 OTUD1Q5VV17 481 aaPredicted RBP15.27■□□□□ 0.04
USB1-210ENST00000565151 NUGGCQ68CJ6 796 aa15.27■□□□□ 0.04
USB1-210ENST00000565151 MBLAC2Q68D91 279 aa15.27■□□□□ 0.04
USB1-210ENST00000565151 SLC36A4Q6YBV0 504 aa15.27■□□□□ 0.04
USB1-210ENST00000565151 GPT2Q8TD30 523 aa15.27■□□□□ 0.04
USB1-210ENST00000565151 FAM149B1Q96BN6 582 aa15.27■□□□□ 0.04
USB1-210ENST00000565151 TOE1Q96GM8 510 aaKnown RBP15.27■□□□□ 0.04
USB1-210ENST00000565151 MRGPRX3Q96LB0 322 aa15.27■□□□□ 0.04
USB1-210ENST00000565151 TMEM9BQ9NQ34 198 aa15.27■□□□□ 0.04
USB1-210ENST00000565151 PLCB1Q9NQ66 1216 aa15.27■□□□□ 0.04
USB1-210ENST00000565151 WSB2Q9NYS7 404 aaPredicted RBP15.27■□□□□ 0.04
USB1-210ENST00000565151 PCDHGC3Q9UN70 934 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms