RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 NAB2Q15742 525 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 GNASQ5JWF2 1037 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 NATD1Q8N6N6 113 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 USP38Q8NB14 1042 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 OR6J1Q8NGC5 347 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 URGCPQ8TCY9 931 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 CHAC2Q8WUX2 184 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 ACCSQ96QU6 501 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 TRIM55Q9BYV6 548 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 ZCCHC2Q9C0B9 1178 aaKnown RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 XPO7Q9UIA9 1087 aaKnown RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 LSM7Q9UK45 103 aaKnown RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 RPL26L1Q9UNX3 145 aaKnown RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 VPS13CQ709C8 3753 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 PSIP1O75475 530 aaKnown RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 STAG3L1P0CL83 205 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 FCGR1AP12314 374 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 PCSK1P29120 753 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 CCR10P46092 362 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 PPM1FP49593 454 aaPredicted RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 CLCNKBP51801 687 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 KRT17Q04695 432 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 PTPRCAPQ14761 206 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 TAF1CQ15572 869 aaPredicted RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 OR6B2Q6IFH4 312 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 CENPUQ71F23 418 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 GPRIN1Q7Z2K8 1008 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 ARFGAP1Q8N6T3 406 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 KIF12Q96FN5 646 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 CEP295NLQ96MC4 621 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 MRPL9Q9BYD2 267 aaKnown RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 MUC13Q9H3R2 512 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 THUMPD1Q9NXG2 353 aaKnown RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 MARCOQ9UEW3 520 aaPredicted RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 PVALEFA0A1B0GWK0 134 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 ESYT2A0FGR8 921 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 LRRD1A4D1F6 860 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 CAPN9O14815 690 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 CA12O43570 354 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 B4GALT3O60512 393 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 PIRTP0C851 137 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 KRT4P19013 534 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 AVPR1AP37288 418 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 NCOA4Q13772 614 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 C11orf63Q6NUN7 778 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 KDM7AQ6ZMT4 941 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 KIF2BQ8N4N8 673 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 DDI1Q8WTU0 396 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 ARHGEF2Q92974 986 aaKnown RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 CELF6Q96J87 481 aaKnown RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 CEP19Q96LK0 163 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 TMEM30AQ9NV96 361 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 MAGEB16A2A368 324 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 H3BRB1 525 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 IRF1P10914 325 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 MX2P20592 715 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 BMPR2Q13873 1038 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 ZNF460Q14592 562 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 LBX2Q6XYB7 198 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 TUT1Q9H6E5 874 aaKnown RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 PRG3Q9Y2Y8 225 aaPredicted RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 PNMA8CA0A1B0GUJ8 204 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 MAPK13O15264 365 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 ECDO95905 644 aaPredicted RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 GSTA2P09210 222 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 CYP3A5P20815 502 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 ENDOUP21128 410 aaKnown RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 ADCY8P40145 1251 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 JAM2P57087 298 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 BNC1Q01954 994 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 KLHL26Q53HC5 615 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 ARTNQ5T4W7 220 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 LDB1Q86U70 411 aaPredicted RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 CCDC13Q8IYE1 715 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 NME8Q8N427 588 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 PCSK9Q8NBP7 692 aaKnown RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 FAM149B1Q96BN6 582 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 MRPL1Q9BYD6 325 aaKnown RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 MAGEE1Q9HCI5 957 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 TRAF3IP3Q9Y228 551 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 GTPBP10A4D1E9 387 aaKnown RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 FAM72CH0Y354 149 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 PDXKO00764 312 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 GPR39O43194 453 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 HSMCR30P0CW71 290 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 RFC5P40937 340 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 BYSLQ13895 437 aaKnown RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 POM121L1PQ3SYA9 428 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 FAM72AQ5TYM5 149 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 TWF2Q6IBS0 349 aaKnown RBP3.45□□□□□ -1.86
CHD9-213ENST00000564845 FAM72DQ6L9T8 149 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 FAM72BQ86X60 149 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 FAM71DQ8N9W8 422 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 DNERQ8NFT8 737 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 ZNF606Q8WXB4 792 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 STAMBPL1Q96FJ0 436 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 MS4A4AQ96JQ5 239 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 VAT1Q99536 393 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 CISHQ9NSE2 258 aa3.45□□□□□ -1.86
CHD9-213ENST00000564845 SELENONQ9NZV5 590 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms