RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 C1QAP02745 245 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 SNRPAP09012 282 aaKnown RBP16.75■□□□□ 0.27
LINC00554-201ENST00000564841 CD151P48509 253 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 DCUN1D2Q6PH85 259 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 XKR5Q6UX68 686 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 PACS1Q6VY07 963 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 TRIM72Q6ZMU5 477 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 CCDC60Q8IWA6 550 aaPredicted RBP16.75■□□□□ 0.27
LINC00554-201ENST00000564841 PIWIL2Q8TC59 973 aaKnown RBP16.75■□□□□ 0.27
LINC00554-201ENST00000564841 PGBD4Q96DM1 585 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 PCDHA10Q9Y5I2 948 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 C7orf72A4D263 438 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 PLOD2O00469 737 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 TPD52L2O43399 206 aaKnown RBP16.75■□□□□ 0.27
LINC00554-201ENST00000564841 CSPG5O95196 566 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 FUCA1P04066 466 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 P4HA1P13674 534 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 IL1R2P27930 398 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 SERPINB5P36952 375 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 THOP1P52888 689 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 WASHC5Q12768 1159 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 DMP1Q13316 513 aaPredicted RBP16.75■□□□□ 0.27
LINC00554-201ENST00000564841 DCAF6Q58WW2 860 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 TEDDM1Q5T9Z0 273 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 ERI1Q8IV48 349 aaKnown RBP16.75■□□□□ 0.27
LINC00554-201ENST00000564841 WDR75Q8IWA0 830 aaKnown RBP16.75■□□□□ 0.27
LINC00554-201ENST00000564841 MRPL47Q9HD33 250 aaKnown RBP16.75■□□□□ 0.27
LINC00554-201ENST00000564841 PCSK1NQ9UHG2 260 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 RBMX2Q9Y388 322 aaKnown RBP16.75■□□□□ 0.27
LINC00554-201ENST00000564841 COQ4Q9Y3A0 265 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 TTLL3Q9Y4R7 772 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 PCDHB4Q9Y5E5 795 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 TEX264Q9Y6I9 313 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 SSC5DA1L4H1 1573 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 SPTLC1O15269 473 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 F7P08709 466 aaPredicted RBP16.75■□□□□ 0.27
LINC00554-201ENST00000564841 GNA15P30679 374 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 KPNA1P52294 538 aaPredicted RBP16.75■□□□□ 0.27
LINC00554-201ENST00000564841 GTF2BQ00403 316 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 DPYSL3Q14195 570 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 OLFML1Q6UWY5 402 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 Q9H521 79 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 JPH1Q9HDC5 661 aaPredicted RBP16.75■□□□□ 0.27
LINC00554-201ENST00000564841 ADARB2Q9NS39 739 aaKnown RBP16.75■□□□□ 0.27
LINC00554-201ENST00000564841 C1orf112Q9NSG2 853 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 CROCCQ5TZA2 2017 aa16.75■□□□□ 0.27
LINC00554-201ENST00000564841 GSRP00390 522 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 GSTT2P0CG29 244 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 GSTT2BP0CG30 244 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 NLRP11P59045 1033 aaKnown RBP16.74■□□□□ 0.27
LINC00554-201ENST00000564841 SLC38A7Q9NVC3 462 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 TJP2Q9UDY2 1190 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 RIMS3Q9UJD0 308 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 GOLGA8QA0A0J9YX86 632 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 GOLGA8OA6NCC3 632 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 TMEM191CA6NGB0 347 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 GOLGA8NF8WBI6 632 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 TMEM191BP0C7N4 346 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 SLC1A6P48664 564 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 SLC10A2Q12908 348 aaPredicted RBP16.74■□□□□ 0.27
LINC00554-201ENST00000564841 ORC1Q13415 861 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 MYBPC2Q14324 1141 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 BRDTQ58F21 947 aaPredicted RBP16.74■□□□□ 0.27
LINC00554-201ENST00000564841 PPP1R14BQ96C90 147 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 LENG8Q96PV6 779 aaPredicted RBP16.74■□□□□ 0.27
LINC00554-201ENST00000564841 CDRT15Q96T59 188 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 RNPEPQ9H4A4 650 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 THAP1Q9NVV9 213 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 RAB26Q9ULW5 256 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 CDC14AQ9UNH5 594 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 COQ6Q9Y2Z9 468 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 DOCK5Q9H7D0 1870 aa16.74■□□□□ 0.27
LINC00554-201ENST00000564841 FUOMA2VDF0 154 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 E2F6O75461 281 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 KRT37O76014 449 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 AMHP03971 560 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 COX4I1P13073 169 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 NUDT2P50583 147 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 ACTR2P61160 394 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 KRT76Q01546 638 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 ADGRE1Q14246 886 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 TBCCQ15814 346 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 RARS2Q5T160 578 aaKnown RBP16.73■□□□□ 0.27
LINC00554-201ENST00000564841 PCGF5Q86SE9 256 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 CLVS1Q8IUQ0 354 aaPredicted RBP16.73■□□□□ 0.27
LINC00554-201ENST00000564841 ABRAQ8N0Z2 381 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 RANBP9Q96S59 729 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 OSBPL6Q9BZF3 934 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 PLGRKTQ9HBL7 147 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 TRNAU1APQ9NX07 287 aaKnown RBP16.73■□□□□ 0.27
LINC00554-201ENST00000564841 SLC9A2Q9UBY0 812 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 IP6K2Q9UHH9 426 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 ITGA11Q9UKX5 1188 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 F5H423 210 aaPredicted RBP16.73■□□□□ 0.27
LINC00554-201ENST00000564841 L1CAMP32004 1257 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 MAPK10P53779 464 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 MYO1HQ8N1T3 1032 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 DQX1Q8TE96 717 aaKnown RBP16.73■□□□□ 0.27
LINC00554-201ENST00000564841 PARVAQ9NVD7 372 aa16.73■□□□□ 0.27
LINC00554-201ENST00000564841 COL11A1P12107 1806 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms