RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 SUN2Q9UH99 717 aa12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 CLEC4EQ9ULY5 219 aa12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 TNRC6BQ9UPQ9 1833 aaKnown RBP12.69□□□□□ -0.38
GTF3C1-204ENST00000564664 ACSL4O60488 711 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 GABBR2O75899 941 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 HLA-FP30511 346 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 GPD2P43304 727 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 MAPK8P45983 427 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 TPMTP51580 245 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 TBX4P57082 545 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 ZBTB16Q05516 673 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 ZNF252P-AS1Q0IIN9 211 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 CAMK2GQ13555 558 aaPredicted RBP12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 ST3GAL2Q16842 350 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 PIK3R6Q5UE93 754 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 TMEM215Q68D42 235 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 SERPINA13PQ6UXR4 307 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 RRAGAQ7L523 313 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 PIP4P1Q86T03 277 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 RGL4Q8IZJ4 473 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 DEFB119Q8N690 84 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 OR2T3Q8NH03 318 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 HSPA12BQ96MM6 686 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 SERPINB11Q96P15 392 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 MED15Q96RN5 788 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 MKRN2Q9H000 416 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 TMEM245Q9H330 911 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 RWDD2AQ9UIY3 292 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 CTNND2Q9UQB3 1225 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 TLR6Q9Y2C9 796 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 CACNA1EQ15878 2313 aa12.68□□□□□ -0.38
GTF3C1-204ENST00000564664 A0A1B0GTW7 788 aa12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 TYW5A2RUC4 315 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 METTL12A8MUP2 240 aa12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 GIPC1O14908 333 aa12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 TSPAN3O60637 253 aa12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 EPHX1P07099 455 aa12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 DLDP09622 509 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 PABPC1P11940 636 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 POLR2EP19388 210 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 BRD2P25440 801 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 RGS7P49802 495 aa12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 COPAP53621 1224 aa12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 SFSWAPQ12872 951 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 MTA1Q13330 715 aa12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 PLEKHG6Q3KR16 790 aa12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 CHST9Q7L1S5 443 aa12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 TMEM110Q86TL2 294 aa12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 ADIPOR2Q86V24 386 aa12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 CCDC117Q8IWD4 279 aaPredicted RBP12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 SCUBE3Q8IX30 993 aa12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 KDM1BQ8NB78 822 aa12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 FIBINQ8TAL6 211 aa12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 KAT5Q92993 513 aa12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 TTC17Q96AE7 1141 aa12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 KREMEN1Q96MU8 473 aa12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 ZSWIM1Q9BR11 485 aa12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 GTPBP2Q9BX10 602 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 INTS2Q9H0H0 1204 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 UBE2TQ9NPD8 197 aaPredicted RBP12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 KIAA1468Q9P260 1216 aa12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 GGA2Q9UJY4 613 aa12.67□□□□□ -0.38
GTF3C1-204ENST00000564664 MAP1BP46821 2468 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 GTPBP10A4D1E9 387 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 H0Y626 953 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 BIN1O00499 593 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 MSI1O43347 362 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 TRIM16O95361 564 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 FYNP06241 537 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 KRT5P13647 590 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 PRKCHP24723 683 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 UBE2HP62256 183 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 FNDC3BQ53EP0 1204 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 IL27RAQ6UWB1 636 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 ARHGEF19Q8IW93 802 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 MINDY1Q8N5J2 469 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 HJURPQ8NCD3 748 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 DEFB124Q8NES8 71 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 ZNF606Q8WXB4 792 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 SORCS1Q8WY21 1168 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 SLC39A13Q96H72 371 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 GPR174Q9BXC1 333 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 SLC4A5Q9BY07 1137 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 SLC6A17Q9H1V8 727 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 THAP9Q9H5L6 903 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 ABCB8Q9NUT2 735 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 SLC12A6Q9UHW9 1150 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 SCML1Q9UN30 329 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 WASF3Q9UPY6 502 aa12.66□□□□□ -0.38
GTF3C1-204ENST00000564664 ATXN2Q99700 1313 aaKnown RBP12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 CEP295Q9C0D2 2601 aa12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 KMT2BQ9UMN6 2715 aaPredicted RBP12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 MEI4A8MW99 385 aa12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 KCNJ18B7U540 433 aa12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 CAPN9O14815 690 aa12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 TBL1XO60907 577 aa12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 GADD45BO75293 160 aaPredicted RBP12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 ASLP04424 464 aa12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 PROS1P07225 676 aa12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 GLI1P08151 1106 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms