RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 CPNE8Q86YQ8 564 aa17.58■□□□□ 0.4
CMTM3-208ENST00000564247 UNC45BQ8IWX7 931 aa17.58■□□□□ 0.4
CMTM3-208ENST00000564247 ARL14EPQ8N8R7 260 aaPredicted RBP17.58■□□□□ 0.4
CMTM3-208ENST00000564247 KIF18AQ8NI77 898 aa17.58■□□□□ 0.4
CMTM3-208ENST00000564247 CD101Q93033 1021 aa17.58■□□□□ 0.4
CMTM3-208ENST00000564247 HES6Q96HZ4 224 aa17.58■□□□□ 0.4
CMTM3-208ENST00000564247 CYP2S1Q96SQ9 504 aa17.58■□□□□ 0.4
CMTM3-208ENST00000564247 PLA2G2FQ9BZM2 168 aa17.58■□□□□ 0.4
CMTM3-208ENST00000564247 RNF38Q9H0F5 515 aa17.58■□□□□ 0.4
CMTM3-208ENST00000564247 SLITRK6Q9H5Y7 841 aa17.58■□□□□ 0.4
CMTM3-208ENST00000564247 CA14Q9ULX7 337 aa17.58■□□□□ 0.4
CMTM3-208ENST00000564247 PACSIN2Q9UNF0 486 aaPredicted RBP17.58■□□□□ 0.4
CMTM3-208ENST00000564247 NUP210Q8TEM1 1887 aaPredicted RBP17.58■□□□□ 0.4
CMTM3-208ENST00000564247 MSI1O43347 362 aaKnown RBP17.57■□□□□ 0.4
CMTM3-208ENST00000564247 HMBSP08397 361 aa17.57■□□□□ 0.4
CMTM3-208ENST00000564247 ADRA1BP35368 520 aa17.57■□□□□ 0.4
CMTM3-208ENST00000564247 AVPR1AP37288 418 aa17.57■□□□□ 0.4
CMTM3-208ENST00000564247 DNA2P51530 1060 aa17.57■□□□□ 0.4
CMTM3-208ENST00000564247 ATXN1P54253 815 aaKnown RBP17.57■□□□□ 0.4
CMTM3-208ENST00000564247 PFKPQ01813 784 aa17.57■□□□□ 0.4
CMTM3-208ENST00000564247 RING1Q06587 406 aa17.57■□□□□ 0.4
CMTM3-208ENST00000564247 EIF4EBP2Q13542 120 aaPredicted RBP17.57■□□□□ 0.4
CMTM3-208ENST00000564247 ZC3H12AQ5D1E8 599 aaKnown RBP17.57■□□□□ 0.4
CMTM3-208ENST00000564247 EFHC2Q5JST6 749 aa17.57■□□□□ 0.4
CMTM3-208ENST00000564247 PSTKQ8IV42 348 aaKnown RBP17.57■□□□□ 0.4
CMTM3-208ENST00000564247 TMEM105Q8N8V8 129 aa17.57■□□□□ 0.4
CMTM3-208ENST00000564247 ATP6V0D2Q8N8Y2 350 aa17.57■□□□□ 0.4
CMTM3-208ENST00000564247 FLCNQ8NFG4 579 aa17.57■□□□□ 0.4
CMTM3-208ENST00000564247 ZSCAN18Q8TBC5 510 aaPredicted RBP17.57■□□□□ 0.4
CMTM3-208ENST00000564247 TEKT4Q8WW24 435 aa17.57■□□□□ 0.4
CMTM3-208ENST00000564247 NTAN1Q96AB6 310 aa17.57■□□□□ 0.4
CMTM3-208ENST00000564247 PLD4Q96BZ4 506 aa17.57■□□□□ 0.4
CMTM3-208ENST00000564247 TLR10Q9BXR5 811 aa17.57■□□□□ 0.4
CMTM3-208ENST00000564247 SLC46A2Q9BY10 475 aa17.57■□□□□ 0.4
CMTM3-208ENST00000564247 ADAM33Q9BZ11 813 aa17.57■□□□□ 0.4
CMTM3-208ENST00000564247 TKTL2Q9H0I9 626 aa17.57■□□□□ 0.4
CMTM3-208ENST00000564247 ARHGEF3Q9NR81 526 aa17.57■□□□□ 0.4
CMTM3-208ENST00000564247 CALCOCO1Q9P1Z2 691 aa17.57■□□□□ 0.4
CMTM3-208ENST00000564247 OBSL1O75147 1896 aa17.56■□□□□ 0.4
CMTM3-208ENST00000564247 ZRANB2O95218 330 aaKnown RBP eCLIP17.56■□□□□ 0.4
CMTM3-208ENST00000564247 OLFM2O95897 454 aa17.56■□□□□ 0.4
CMTM3-208ENST00000564247 ATP1A1P05023 1023 aaKnown RBP17.56■□□□□ 0.4
CMTM3-208ENST00000564247 RARAP10276 462 aa17.56■□□□□ 0.4
CMTM3-208ENST00000564247 AOC1P19801 751 aa17.56■□□□□ 0.4
CMTM3-208ENST00000564247 HARS2P49590 506 aaKnown RBP17.56■□□□□ 0.4
CMTM3-208ENST00000564247 PEX5P50542 639 aa17.56■□□□□ 0.4
CMTM3-208ENST00000564247 SLC7A9P82251 487 aa17.56■□□□□ 0.4
CMTM3-208ENST00000564247 SLC25A11Q02978 314 aaKnown RBP17.56■□□□□ 0.4
CMTM3-208ENST00000564247 RAB6CQ53S08 254 aa17.56■□□□□ 0.4
CMTM3-208ENST00000564247 NUGGCQ68CJ6 796 aa17.56■□□□□ 0.4
CMTM3-208ENST00000564247 MAP7D3Q8IWC1 876 aa17.56■□□□□ 0.4
CMTM3-208ENST00000564247 KATNAL2Q8IYT4 538 aa17.56■□□□□ 0.4
CMTM3-208ENST00000564247 RCOR2Q8IZ40 523 aa17.56■□□□□ 0.4
CMTM3-208ENST00000564247 KCTD6Q8NC69 237 aa17.56■□□□□ 0.4
CMTM3-208ENST00000564247 HSPH1Q92598 858 aa17.56■□□□□ 0.4
CMTM3-208ENST00000564247 E2F7Q96AV8 911 aa17.56■□□□□ 0.4
CMTM3-208ENST00000564247 SLC39A13Q96H72 371 aa17.56■□□□□ 0.4
CMTM3-208ENST00000564247 PBKQ96KB5 322 aa17.56■□□□□ 0.4
CMTM3-208ENST00000564247 KLF16Q9BXK1 252 aaPredicted RBP17.56■□□□□ 0.4
CMTM3-208ENST00000564247 DCLK3Q9C098 648 aa17.56■□□□□ 0.4
CMTM3-208ENST00000564247 RAB6CQ9H0N0 254 aa17.56■□□□□ 0.4
CMTM3-208ENST00000564247 KCNK3O14649 394 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 DDX3YO15523 660 aaKnown RBP17.55■□□□□ 0.4
CMTM3-208ENST00000564247 TCF4P15884 667 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 PRLRP16471 622 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 TCP1P17987 556 aaKnown RBP17.55■□□□□ 0.4
CMTM3-208ENST00000564247 IL1R2P27930 398 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 WEE1P30291 646 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 PLA2G5P39877 138 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 KRT81Q14533 505 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 KCNT1Q5JUK3 1230 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 STXBP5Q5T5C0 1151 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 ACBD5Q5T8D3 534 aaPredicted RBP17.55■□□□□ 0.4
CMTM3-208ENST00000564247 VITQ6UXI7 678 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 DDX42Q86XP3 938 aaKnown RBP eCLIP17.55■□□□□ 0.4
CMTM3-208ENST00000564247 CMTM8Q8IZV2 173 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 CCDC185Q8N715 623 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 EXD1Q8NHP7 514 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 DEPDC1BQ8WUY9 529 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 KRT35Q92764 455 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 RBM41Q96IZ5 413 aaKnown RBP17.55■□□□□ 0.4
CMTM3-208ENST00000564247 FCRL2Q96LA5 508 aaPredicted RBP17.55■□□□□ 0.4
CMTM3-208ENST00000564247 HAPLN3Q96S86 360 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 GKN1Q9NS71 199 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 ARHGEF38Q9NXL2 777 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 FZD10Q9ULW2 581 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 AP4E1Q9UPM8 1137 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 CPQQ9Y646 472 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 SAR1BQ9Y6B6 198 aa17.55■□□□□ 0.4
CMTM3-208ENST00000564247 KCNU1A8MYU2 1149 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 KRT1P04264 644 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 PSMC3P17980 439 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 VIPR2P41587 438 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 STARD6P59095 220 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 PRKCQQ04759 706 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 PDK2Q15119 407 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 SMTNL2Q2TAL5 461 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 ATP13A4Q4VNC1 1196 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 SLC44A4Q53GD3 710 aa17.54■□□□□ 0.4
CMTM3-208ENST00000564247 PAPD7Q5XG87 772 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms