RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 NUCKS1Q9H1E3 243 aaKnown RBP31.91■■■□□ 2.7
CMTM4-204ENST00000563952 PARD6AQ9NPB6 346 aa31.91■■■□□ 2.7
CMTM4-204ENST00000563952 DDIT4Q9NX09 232 aa31.91■■■□□ 2.7
CMTM4-204ENST00000563952 ELOVL2Q9NXB9 296 aa31.91■■■□□ 2.7
CMTM4-204ENST00000563952 XPO7Q9UIA9 1087 aaKnown RBP31.91■■■□□ 2.7
CMTM4-204ENST00000563952 SMTNL1A8MU46 457 aa31.9■■■□□ 2.7
CMTM4-204ENST00000563952 WASH3PC4AMC7 463 aa31.9■■■□□ 2.7
CMTM4-204ENST00000563952 DAB1O75553 588 aa31.9■■■□□ 2.7
CMTM4-204ENST00000563952 LSM8O95777 96 aaKnown RBP31.9■■■□□ 2.7
CMTM4-204ENST00000563952 PLK5Q496M5 336 aa31.9■■■□□ 2.7
CMTM4-204ENST00000563952 KIAA1211LQ6NV74 962 aa31.9■■■□□ 2.7
CMTM4-204ENST00000563952 SLC26A9Q7LBE3 791 aa31.9■■■□□ 2.7
CMTM4-204ENST00000563952 ERICH1Q86X53 443 aa31.9■■■□□ 2.7
CMTM4-204ENST00000563952 ZDHHC17Q8IUH5 632 aa31.9■■■□□ 2.7
CMTM4-204ENST00000563952 HJURPQ8NCD3 748 aaPredicted RBP31.9■■■□□ 2.7
CMTM4-204ENST00000563952 RLN3Q8WXF3 142 aa31.9■■■□□ 2.7
CMTM4-204ENST00000563952 SORCS1Q8WY21 1168 aa31.9■■■□□ 2.7
CMTM4-204ENST00000563952 RNF34Q969K3 372 aa31.9■■■□□ 2.7
CMTM4-204ENST00000563952 ZC3H10Q96K80 434 aaKnown RBP31.9■■■□□ 2.7
CMTM4-204ENST00000563952 PRICKLE1Q96MT3 831 aaPredicted RBP31.9■■■□□ 2.7
CMTM4-204ENST00000563952 ABCB8Q9NUT2 735 aa31.9■■■□□ 2.7
CMTM4-204ENST00000563952 NOCTQ9UK39 431 aaKnown RBP31.9■■■□□ 2.7
CMTM4-204ENST00000563952 STON1Q9Y6Q2 735 aa31.9■■■□□ 2.7
CMTM4-204ENST00000563952 TYW5A2RUC4 315 aaKnown RBP31.89■■■□□ 2.7
CMTM4-204ENST00000563952 HLA-FP30511 346 aa31.89■■■□□ 2.7
CMTM4-204ENST00000563952 STAT1P42224 750 aa31.89■■■□□ 2.7
CMTM4-204ENST00000563952 EIF4HQ15056 248 aaKnown RBP31.89■■■□□ 2.7
CMTM4-204ENST00000563952 ELF2Q15723 593 aa31.89■■■□□ 2.7
CMTM4-204ENST00000563952 KLHL40Q2TBA0 621 aa31.89■■■□□ 2.7
CMTM4-204ENST00000563952 NAA35Q5VZE5 725 aa31.89■■■□□ 2.7
CMTM4-204ENST00000563952 CPA5Q8WXQ8 436 aa31.89■■■□□ 2.7
CMTM4-204ENST00000563952 C18orf8Q96DM3 657 aa31.89■■■□□ 2.7
CMTM4-204ENST00000563952 MYEOVQ96EZ4 313 aa31.89■■■□□ 2.7
CMTM4-204ENST00000563952 ERGIC2Q96RQ1 377 aa31.89■■■□□ 2.7
CMTM4-204ENST00000563952 IRX2Q9BZI1 471 aaPredicted RBP31.89■■■□□ 2.7
CMTM4-204ENST00000563952 DUSP15Q9H1R2 295 aaPredicted RBP31.89■■■□□ 2.7
CMTM4-204ENST00000563952 THAP10Q9P2Z0 257 aaPredicted RBP31.89■■■□□ 2.7
CMTM4-204ENST00000563952 ZBTB24O43167 697 aaPredicted RBP31.88■■■□□ 2.69
CMTM4-204ENST00000563952 GABRG2P18507 467 aa31.88■■■□□ 2.69
CMTM4-204ENST00000563952 ZNF165P49910 485 aa31.88■■■□□ 2.69
CMTM4-204ENST00000563952 RNASE9P60153 205 aaKnown RBP31.88■■■□□ 2.69
CMTM4-204ENST00000563952 RPS24P62847 133 aaKnown RBP31.88■■■□□ 2.69
CMTM4-204ENST00000563952 ARID5AQ03989 594 aa31.88■■■□□ 2.69
CMTM4-204ENST00000563952 MS4A13Q5J8X5 152 aa31.88■■■□□ 2.69
CMTM4-204ENST00000563952 MPP7Q5T2T1 576 aa31.88■■■□□ 2.69
CMTM4-204ENST00000563952 TMEM215Q68D42 235 aa31.88■■■□□ 2.69
CMTM4-204ENST00000563952 ZNF677Q86XU0 584 aa31.88■■■□□ 2.69
CMTM4-204ENST00000563952 MSANTD4Q8NCY6 345 aa31.88■■■□□ 2.69
CMTM4-204ENST00000563952 OLIG1Q8TAK6 271 aa31.88■■■□□ 2.69
CMTM4-204ENST00000563952 WFDC5Q8TCV5 224 aa31.88■■■□□ 2.69
CMTM4-204ENST00000563952 LOXL4Q96JB6 756 aa31.88■■■□□ 2.69
CMTM4-204ENST00000563952 BTN2A3PQ96KV6 586 aa31.88■■■□□ 2.69
CMTM4-204ENST00000563952 ARRDC1-AS1Q9H2J1 176 aa31.88■■■□□ 2.69
CMTM4-204ENST00000563952 SLTMQ9NWH9 1034 aaKnown RBP eCLIP31.88■■■□□ 2.69
CMTM4-204ENST00000563952 GGA2Q9UJY4 613 aa31.88■■■□□ 2.69
CMTM4-204ENST00000563952 RALGAPA1Q6GYQ0 2036 aa31.87■■■□□ 2.69
CMTM4-204ENST00000563952 SYCE3A1L190 88 aa31.87■■■□□ 2.69
CMTM4-204ENST00000563952 RHOBTB1O94844 696 aa31.87■■■□□ 2.69
CMTM4-204ENST00000563952 BCKDHBP21953 392 aa31.87■■■□□ 2.69
CMTM4-204ENST00000563952 TGM1P22735 817 aa31.87■■■□□ 2.69
CMTM4-204ENST00000563952 IL12RB1P42701 662 aa31.87■■■□□ 2.69
CMTM4-204ENST00000563952 GABRB2P47870 512 aa31.87■■■□□ 2.69
CMTM4-204ENST00000563952 CDR2Q01850 454 aa31.87■■■□□ 2.69
CMTM4-204ENST00000563952 NME3Q13232 169 aa31.87■■■□□ 2.69
CMTM4-204ENST00000563952 C2CD6Q53TS8 623 aa31.87■■■□□ 2.69
CMTM4-204ENST00000563952 RAP1GAP2Q684P5 730 aa31.87■■■□□ 2.69
CMTM4-204ENST00000563952 CHST9Q7L1S5 443 aa31.87■■■□□ 2.69
CMTM4-204ENST00000563952 CHSY1Q86X52 802 aa31.87■■■□□ 2.69
CMTM4-204ENST00000563952 MFN1Q8IWA4 741 aa31.87■■■□□ 2.69
CMTM4-204ENST00000563952 LGI2Q8N0V4 545 aa31.87■■■□□ 2.69
CMTM4-204ENST00000563952 CFAP52Q8N1V2 620 aa31.87■■■□□ 2.69
CMTM4-204ENST00000563952 ATP6V0D2Q8N8Y2 350 aa31.87■■■□□ 2.69
CMTM4-204ENST00000563952 ZNF397Q8NF99 534 aaPredicted RBP31.87■■■□□ 2.69
CMTM4-204ENST00000563952 SPACA7Q96KW9 195 aa31.87■■■□□ 2.69
CMTM4-204ENST00000563952 SLC12A6Q9UHW9 1150 aa31.87■■■□□ 2.69
CMTM4-204ENST00000563952 NPC1O15118 1278 aa31.86■■■□□ 2.69
CMTM4-204ENST00000563952 TIMM44O43615 452 aa31.86■■■□□ 2.69
CMTM4-204ENST00000563952 EPN2O95208 641 aa31.86■■■□□ 2.69
CMTM4-204ENST00000563952 SLC2A3P11169 496 aa31.86■■■□□ 2.69
CMTM4-204ENST00000563952 PABPC1P11940 636 aaKnown RBP31.86■■■□□ 2.69
CMTM4-204ENST00000563952 ABCB4P21439 1286 aa31.86■■■□□ 2.69
CMTM4-204ENST00000563952 NOS2P35228 1153 aa31.86■■■□□ 2.69
CMTM4-204ENST00000563952 NOMO3P69849 1222 aa31.86■■■□□ 2.69
CMTM4-204ENST00000563952 EIF4EBP2Q13542 120 aaPredicted RBP31.86■■■□□ 2.69
CMTM4-204ENST00000563952 ZNF234Q14588 700 aa31.86■■■□□ 2.69
CMTM4-204ENST00000563952 FAM102AQ5T9C2 384 aaPredicted RBP31.86■■■□□ 2.69
CMTM4-204ENST00000563952 C11orf74Q86VG3 221 aa31.86■■■□□ 2.69
CMTM4-204ENST00000563952 XYLT1Q86Y38 959 aa31.86■■■□□ 2.69
CMTM4-204ENST00000563952 WFIKKN2Q8TEU8 576 aa31.86■■■□□ 2.69
CMTM4-204ENST00000563952 FUCA2Q9BTY2 467 aa31.86■■■□□ 2.69
CMTM4-204ENST00000563952 SEMA4GQ9NTN9 838 aa31.86■■■□□ 2.69
CMTM4-204ENST00000563952 CALCOCO1Q9P1Z2 691 aa31.86■■■□□ 2.69
CMTM4-204ENST00000563952 SDK1Q7Z5N4 2213 aa31.85■■■□□ 2.69
CMTM4-204ENST00000563952 GOLGA8SH3BPF8 625 aa31.85■■■□□ 2.69
CMTM4-204ENST00000563952 LRP3O75074 770 aa31.85■■■□□ 2.69
CMTM4-204ENST00000563952 TACR2P21452 398 aa31.85■■■□□ 2.69
CMTM4-204ENST00000563952 CCR1P32246 355 aa31.85■■■□□ 2.69
CMTM4-204ENST00000563952 CD70P32970 193 aa31.85■■■□□ 2.69
CMTM4-204ENST00000563952 P2RY2P41231 377 aa31.85■■■□□ 2.69
CMTM4-204ENST00000563952 STARD3Q14849 445 aa31.85■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms