RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 NKD2Q969F2 451 aaPredicted RBP22.7■■□□□ 1.22
LINC01960-201ENST00000563759 TRIM31Q9BZY9 425 aa22.7■■□□□ 1.22
LINC01960-201ENST00000563759 SLC28A3Q9HAS3 691 aa22.7■■□□□ 1.22
LINC01960-201ENST00000563759 COCHO43405 550 aa22.69■■□□□ 1.22
LINC01960-201ENST00000563759 DPYSQ14117 519 aa22.69■■□□□ 1.22
LINC01960-201ENST00000563759 PABPC1LQ4VXU2 614 aaKnown RBP22.69■■□□□ 1.22
LINC01960-201ENST00000563759 NCBP2-AS2Q69YL0 99 aa22.69■■□□□ 1.22
LINC01960-201ENST00000563759 KLHDC10Q6PID8 442 aa22.69■■□□□ 1.22
LINC01960-201ENST00000563759 ATP6V0D2Q8N8Y2 350 aa22.69■■□□□ 1.22
LINC01960-201ENST00000563759 PRDM16Q9HAZ2 1276 aa22.69■■□□□ 1.22
LINC01960-201ENST00000563759 SLC12A6Q9UHW9 1150 aa22.69■■□□□ 1.22
LINC01960-201ENST00000563759 HBS1LQ9Y450 684 aaKnown RBP22.69■■□□□ 1.22
LINC01960-201ENST00000563759 SHROOM3Q8TF72 1996 aa22.69■■□□□ 1.22
LINC01960-201ENST00000563759 CCDC151A5D8V7 595 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 TNRC18O15417 2968 aaPredicted RBP22.68■■□□□ 1.22
LINC01960-201ENST00000563759 CCL16O15467 120 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 CLASP2O75122 1294 aaKnown RBP22.68■■□□□ 1.22
LINC01960-201ENST00000563759 LRIG2O94898 1065 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 EPHB2P29323 1055 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 RING1Q06587 406 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 BRD3Q15059 726 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 OASLQ15646 514 aaKnown RBP22.68■■□□□ 1.22
LINC01960-201ENST00000563759 GDPD5Q8WTR4 605 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 SLC22A17Q8WUG5 538 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 TRPC7Q9HCX4 862 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 GDF3Q9NR23 364 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 ETNK2Q9NVF9 386 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 XPO7Q9UIA9 1087 aaKnown RBP22.68■■□□□ 1.22
LINC01960-201ENST00000563759 HELZP42694 1942 aaKnown RBP22.68■■□□□ 1.22
LINC01960-201ENST00000563759 C2orf78A6NCI8 922 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 OAS1P00973 400 aaKnown RBP22.68■■□□□ 1.22
LINC01960-201ENST00000563759 IGLV3-27P01718 113 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 ITGAVP06756 1048 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 SRGAP2BP0DMP2 458 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 RBP3P10745 1247 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 H2AFXP16104 143 aaPredicted RBP22.68■■□□□ 1.22
LINC01960-201ENST00000563759 GABRR2P28476 465 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 HCAR3P49019 387 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 NUGGCQ68CJ6 796 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 SYDE1Q6ZW31 735 aaPredicted RBP22.68■■□□□ 1.22
LINC01960-201ENST00000563759 TMEM150AQ86TG1 271 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 ZC3H18Q86VM9 953 aaKnown RBP22.68■■□□□ 1.22
LINC01960-201ENST00000563759 IFT81Q8WYA0 676 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 BTN2A3PQ96KV6 586 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 GCNAQ96QF7 691 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 ERP44Q9BS26 406 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 TMEM121Q9BTD3 319 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 DPH5Q9H2P9 285 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 ASAH2Q9NR71 780 aa22.68■■□□□ 1.22
LINC01960-201ENST00000563759 SPDYE4A6NLX3 237 aa22.67■■□□□ 1.22
LINC01960-201ENST00000563759 SGK1O00141 431 aa22.67■■□□□ 1.22
LINC01960-201ENST00000563759 PER2O15055 1255 aa22.67■■□□□ 1.22
LINC01960-201ENST00000563759 ERLIN1O75477 346 aa22.67■■□□□ 1.22
LINC01960-201ENST00000563759 MAP3K6O95382 1288 aa22.67■■□□□ 1.22
LINC01960-201ENST00000563759 F11P03951 625 aa22.67■■□□□ 1.22
LINC01960-201ENST00000563759 EPCAMP16422 314 aa22.67■■□□□ 1.22
LINC01960-201ENST00000563759 GBE1Q04446 702 aa22.67■■□□□ 1.22
LINC01960-201ENST00000563759 RWDD4Q6NW29 188 aaKnown RBP22.67■■□□□ 1.22
LINC01960-201ENST00000563759 TMCO3Q6UWJ1 677 aa22.67■■□□□ 1.22
LINC01960-201ENST00000563759 RTL10Q7L3V2 364 aa22.67■■□□□ 1.22
LINC01960-201ENST00000563759 RBM23Q86U06 439 aaKnown RBP22.67■■□□□ 1.22
LINC01960-201ENST00000563759 CASKIN2Q8WXE0 1202 aa22.67■■□□□ 1.22
LINC01960-201ENST00000563759 CORO1BQ9BR76 489 aa22.67■■□□□ 1.22
LINC01960-201ENST00000563759 IL21Q9HBE4 155 aa22.67■■□□□ 1.22
LINC01960-201ENST00000563759 ASIC3Q9UHC3 531 aa22.67■■□□□ 1.22
LINC01960-201ENST00000563759 DRG1Q9Y295 367 aaKnown RBP22.67■■□□□ 1.22
LINC01960-201ENST00000563759 MFHAS1Q9Y4C4 1052 aa22.67■■□□□ 1.22
LINC01960-201ENST00000563759 HS3ST4Q9Y661 456 aa22.67■■□□□ 1.22
LINC01960-201ENST00000563759 C1RP00736 705 aa22.66■■□□□ 1.22
LINC01960-201ENST00000563759 ERCC2P18074 760 aa22.66■■□□□ 1.22
LINC01960-201ENST00000563759 TNFRSF8P28908 595 aa22.66■■□□□ 1.22
LINC01960-201ENST00000563759 NR2C2P49116 596 aa22.66■■□□□ 1.22
LINC01960-201ENST00000563759 TMC8Q8IU68 726 aa22.66■■□□□ 1.22
LINC01960-201ENST00000563759 HS6ST3Q8IZP7 471 aa22.66■■□□□ 1.22
LINC01960-201ENST00000563759 H7C0C1 242 aa22.66■■□□□ 1.22
LINC01960-201ENST00000563759 MFSD11O43934 449 aa22.66■■□□□ 1.22
LINC01960-201ENST00000563759 RFPL2O75678 378 aa22.66■■□□□ 1.22
LINC01960-201ENST00000563759 ATP5OP48047 213 aa22.66■■□□□ 1.22
LINC01960-201ENST00000563759 COG7P83436 770 aa22.66■■□□□ 1.22
LINC01960-201ENST00000563759 PTK6Q13882 451 aa22.66■■□□□ 1.22
LINC01960-201ENST00000563759 PIK3R6Q5UE93 754 aa22.66■■□□□ 1.22
LINC01960-201ENST00000563759 UNC45BQ8IWX7 931 aa22.66■■□□□ 1.22
LINC01960-201ENST00000563759 GSPT2Q8IYD1 628 aaKnown RBP22.66■■□□□ 1.22
LINC01960-201ENST00000563759 TDHQ8IZJ6 230 aa22.66■■□□□ 1.22
LINC01960-201ENST00000563759 ALLCQ8N6M5 410 aa22.66■■□□□ 1.22
LINC01960-201ENST00000563759 MRPS31Q92665 395 aaKnown RBP22.66■■□□□ 1.22
LINC01960-201ENST00000563759 TBC1D31Q96DN5 1066 aa22.66■■□□□ 1.22
LINC01960-201ENST00000563759 DPP7Q9UHL4 492 aa22.66■■□□□ 1.22
LINC01960-201ENST00000563759 DCLK1O15075 740 aa22.65■■□□□ 1.22
LINC01960-201ENST00000563759 CDC25CP30307 473 aa22.65■■□□□ 1.22
LINC01960-201ENST00000563759 HTR7P34969 479 aa22.65■■□□□ 1.22
LINC01960-201ENST00000563759 CLCN6P51797 869 aa22.65■■□□□ 1.22
LINC01960-201ENST00000563759 MTA1Q13330 715 aa22.65■■□□□ 1.22
LINC01960-201ENST00000563759 CUL1Q13616 776 aa22.65■■□□□ 1.22
LINC01960-201ENST00000563759 HLTFQ14527 1009 aaKnown RBP eCLIP22.65■■□□□ 1.22
LINC01960-201ENST00000563759 TRIP13Q15645 432 aaPredicted RBP22.65■■□□□ 1.22
LINC01960-201ENST00000563759 MAP9Q49MG5 647 aa22.65■■□□□ 1.22
LINC01960-201ENST00000563759 DARS2Q6PI48 645 aaKnown RBP22.65■■□□□ 1.22
LINC01960-201ENST00000563759 ELMSAN1Q6PJG2 1045 aa22.65■■□□□ 1.22
LINC01960-201ENST00000563759 GAREM2Q75VX8 874 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms