RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 SLC16A3O15427 465 aaKnown RBP17.52■□□□□ 0.4
HDGFL3-203ENST00000563404 ACADMP11310 421 aa17.52■□□□□ 0.4
HDGFL3-203ENST00000563404 CD19P15391 556 aa17.52■□□□□ 0.4
HDGFL3-203ENST00000563404 ACSL1P33121 698 aa17.52■□□□□ 0.4
HDGFL3-203ENST00000563404 RDXP35241 583 aaKnown RBP17.52■□□□□ 0.4
HDGFL3-203ENST00000563404 HARS2P49590 506 aaKnown RBP17.52■□□□□ 0.4
HDGFL3-203ENST00000563404 DAOAP59103 153 aa17.52■□□□□ 0.4
HDGFL3-203ENST00000563404 RING1Q06587 406 aa17.52■□□□□ 0.4
HDGFL3-203ENST00000563404 LRMPQ12912 555 aa17.52■□□□□ 0.4
HDGFL3-203ENST00000563404 NUMA1Q14980 2115 aa17.52■□□□□ 0.4
HDGFL3-203ENST00000563404 CHST9Q7L1S5 443 aa17.52■□□□□ 0.4
HDGFL3-203ENST00000563404 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.52■□□□□ 0.4
HDGFL3-203ENST00000563404 RNF139Q8WU17 664 aa17.52■□□□□ 0.4
HDGFL3-203ENST00000563404 KCTD13Q8WZ19 329 aa17.52■□□□□ 0.4
HDGFL3-203ENST00000563404 TFAP2BQ92481 460 aa17.52■□□□□ 0.4
HDGFL3-203ENST00000563404 TMA16Q96EY4 203 aaKnown RBP17.52■□□□□ 0.4
HDGFL3-203ENST00000563404 ZSWIM1Q9BR11 485 aa17.52■□□□□ 0.4
HDGFL3-203ENST00000563404 ABCB8Q9NUT2 735 aa17.52■□□□□ 0.4
HDGFL3-203ENST00000563404 ITPR1Q14643 2758 aa17.52■□□□□ 0.4
HDGFL3-203ENST00000563404 GOLGA6L7A0A1B0GV03 622 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 A0A1B0GVT2 93 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 TRIM49BA6NDI0 452 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 CALCAP01258 141 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 VDRP11473 427 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 LCP1P13796 627 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 ARID5AQ03989 594 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 E2F5Q15329 346 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 HLA-BQ31612 363 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 FNDC3BQ53EP0 1204 aaKnown RBP17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 COBLL1Q53SF7 1204 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 ADGRF1Q5T601 910 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 DBX2Q6ZNG2 339 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 GLRX5Q86SX6 157 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 FMR1NBQ8N0W7 255 aaPredicted RBP17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 SCML4Q8N228 414 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 BAHD1Q8TBE0 780 aaPredicted RBP17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 WFIKKN2Q8TEU8 576 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 ERCC4Q92889 916 aaPredicted RBP17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 SLC35C1Q96A29 364 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 IPO9Q96P70 1041 aaKnown RBP17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 LHX5Q9H2C1 402 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 TM7SF3Q9NS93 570 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 ABCC13Q9NSE7 274 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 HESX1Q9UBX0 185 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 GGA2Q9UJY4 613 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 PLXNB3Q9ULL4 1909 aa17.51■□□□□ 0.39
HDGFL3-203ENST00000563404 RNF225M0QZC1 329 aaPredicted RBP17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 PIK3R2O00459 728 aa17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 LATS1O95835 1130 aa17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 IGLV3-27P01718 113 aa17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 ZNF883P0CG24 379 aa17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 PABPC1P11940 636 aaKnown RBP17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 SLC6A4P31645 630 aa17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 CD70P32970 193 aa17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 MATKP42679 507 aa17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 CSNK1EP49674 416 aaKnown RBP17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 RGS7P49802 495 aa17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 SCAPQ12770 1279 aa17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 FAM133BQ5BKY9 247 aaKnown RBP17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 ZNF658Q5TYW1 1059 aaPredicted RBP17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 MBLAC2Q68D91 279 aa17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 PMF1Q6P1K2 205 aa17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 MSANTD2Q6P1R3 559 aa17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 RFWD3Q6PCD5 774 aa17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 CCNI2Q6ZMN8 369 aaPredicted RBP17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 PROSER1Q86XN7 944 aa17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 SIX6OS1Q8N1H7 587 aa17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 SETD7Q8WTS6 366 aaKnown RBP17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 CLEC4CQ8WTT0 213 aa17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 MYEOVQ96EZ4 313 aa17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 LMLNQ96KR4 655 aa17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 PRSS16Q9NQE7 514 aa17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 CNGB3Q9NQW8 809 aa17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 TOR4AQ9NXH8 423 aa17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 ANKRD11Q6UB99 2663 aaPredicted RBP17.5■□□□□ 0.39
HDGFL3-203ENST00000563404 CER1O95813 267 aa17.49■□□□□ 0.39
HDGFL3-203ENST00000563404 SETSIPP0DME0 302 aa17.49■□□□□ 0.39
HDGFL3-203ENST00000563404 ZNF445P59923 1031 aa17.49■□□□□ 0.39
HDGFL3-203ENST00000563404 RPS14P62263 151 aaKnown RBP17.49■□□□□ 0.39
HDGFL3-203ENST00000563404 FKBP3Q00688 224 aaKnown RBP17.49■□□□□ 0.39
HDGFL3-203ENST00000563404 KIF19Q2TAC6 998 aa17.49■□□□□ 0.39
HDGFL3-203ENST00000563404 PIK3R6Q5UE93 754 aa17.49■□□□□ 0.39
HDGFL3-203ENST00000563404 LRSAM1Q6UWE0 723 aa17.49■□□□□ 0.39
HDGFL3-203ENST00000563404 LCLAT1Q6UWP7 414 aa17.49■□□□□ 0.39
HDGFL3-203ENST00000563404 SLC35F5Q8WV83 523 aa17.49■□□□□ 0.39
HDGFL3-203ENST00000563404 SNX19Q92543 992 aa17.49■□□□□ 0.39
HDGFL3-203ENST00000563404 KAT5Q92993 513 aa17.49■□□□□ 0.39
HDGFL3-203ENST00000563404 PCED1AQ9H1Q7 454 aa17.49■□□□□ 0.39
HDGFL3-203ENST00000563404 MTG2Q9H4K7 406 aa17.49■□□□□ 0.39
HDGFL3-203ENST00000563404 PLA2G4CQ9UP65 541 aa17.49■□□□□ 0.39
HDGFL3-203ENST00000563404 LHX6Q9UPM6 363 aa17.49■□□□□ 0.39
HDGFL3-203ENST00000563404 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.49■□□□□ 0.39
HDGFL3-203ENST00000563404 CELSR3Q9NYQ7 3312 aa17.49■□□□□ 0.39
HDGFL3-203ENST00000563404 TBL1XO60907 577 aa17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 DLDP09622 509 aaKnown RBP17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 ANP32AP39687 249 aaKnown RBP17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 YWHAEP62258 255 aaKnown RBP17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 KCNT1Q5JUK3 1230 aa17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 NADSYN1Q6IA69 706 aa17.48■□□□□ 0.39
HDGFL3-203ENST00000563404 TMEM270Q6UE05 265 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms