RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 EEF1GP26641 437 aaKnown RBP17.5■□□□□ 0.39
CLK3-210ENST00000563112 ENPP2Q13822 863 aa17.5■□□□□ 0.39
CLK3-210ENST00000563112 FUT11Q495W5 492 aa17.5■□□□□ 0.39
CLK3-210ENST00000563112 RFWD3Q6PCD5 774 aa17.5■□□□□ 0.39
CLK3-210ENST00000563112 SERPINA13PQ6UXR4 307 aa17.5■□□□□ 0.39
CLK3-210ENST00000563112 CHST9Q7L1S5 443 aa17.5■□□□□ 0.39
CLK3-210ENST00000563112 SYT12Q8IV01 421 aa17.5■□□□□ 0.39
CLK3-210ENST00000563112 AHI1Q8N157 1196 aa17.5■□□□□ 0.39
CLK3-210ENST00000563112 HJURPQ8NCD3 748 aaPredicted RBP17.5■□□□□ 0.39
CLK3-210ENST00000563112 ADAM32Q8TC27 787 aa17.5■□□□□ 0.39
CLK3-210ENST00000563112 PPP1R13BQ96KQ4 1090 aa17.5■□□□□ 0.39
CLK3-210ENST00000563112 FCRL2Q96LA5 508 aaPredicted RBP17.5■□□□□ 0.39
CLK3-210ENST00000563112 MRGPRX1Q96LB2 322 aa17.5■□□□□ 0.39
CLK3-210ENST00000563112 EDEM2Q9BV94 578 aa17.5■□□□□ 0.39
CLK3-210ENST00000563112 LHX5Q9H2C1 402 aa17.5■□□□□ 0.39
CLK3-210ENST00000563112 PDCL3Q9H2J4 239 aa17.5■□□□□ 0.39
CLK3-210ENST00000563112 PRDM16Q9HAZ2 1276 aa17.5■□□□□ 0.39
CLK3-210ENST00000563112 RXFP3Q9NSD7 469 aa17.5■□□□□ 0.39
CLK3-210ENST00000563112 ABCB8Q9NUT2 735 aa17.5■□□□□ 0.39
CLK3-210ENST00000563112 IGHV1OR15-9A0A0B4J2B8 117 aa17.49■□□□□ 0.39
CLK3-210ENST00000563112 ATP5BP06576 529 aaKnown RBP17.49■□□□□ 0.39
CLK3-210ENST00000563112 EPHX1P07099 455 aa17.49■□□□□ 0.39
CLK3-210ENST00000563112 GLI1P08151 1106 aa17.49■□□□□ 0.39
CLK3-210ENST00000563112 PABPC1P11940 636 aaKnown RBP17.49■□□□□ 0.39
CLK3-210ENST00000563112 HLA-FP30511 346 aa17.49■□□□□ 0.39
CLK3-210ENST00000563112 PTGER3P43115 390 aa17.49■□□□□ 0.39
CLK3-210ENST00000563112 FAM133BQ5BKY9 247 aaKnown RBP17.49■□□□□ 0.39
CLK3-210ENST00000563112 EFHC1Q5JVL4 640 aa17.49■□□□□ 0.39
CLK3-210ENST00000563112 MIIPQ5JXC2 388 aa17.49■□□□□ 0.39
CLK3-210ENST00000563112 SYPL2Q5VXT5 272 aa17.49■□□□□ 0.39
CLK3-210ENST00000563112 METTL3Q86U44 580 aaKnown RBP17.49■□□□□ 0.39
CLK3-210ENST00000563112 TAC4Q86UU9 113 aa17.49■□□□□ 0.39
CLK3-210ENST00000563112 PASD1Q8IV76 773 aa17.49■□□□□ 0.39
CLK3-210ENST00000563112 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.49■□□□□ 0.39
CLK3-210ENST00000563112 SORCS1Q8WY21 1168 aa17.49■□□□□ 0.39
CLK3-210ENST00000563112 SLC39A13Q96H72 371 aa17.49■□□□□ 0.39
CLK3-210ENST00000563112 NUSAP1Q9BXS6 441 aaKnown RBP17.49■□□□□ 0.39
CLK3-210ENST00000563112 SYNCQ9H7C4 482 aa17.49■□□□□ 0.39
CLK3-210ENST00000563112 SAMSN1Q9NSI8 373 aaKnown RBP17.49■□□□□ 0.39
CLK3-210ENST00000563112 STIM2Q9P246 746 aa17.49■□□□□ 0.39
CLK3-210ENST00000563112 SLC12A6Q9UHW9 1150 aa17.49■□□□□ 0.39
CLK3-210ENST00000563112 GGA2Q9UJY4 613 aa17.49■□□□□ 0.39
CLK3-210ENST00000563112 NFE2L3Q9Y4A8 694 aa17.49■□□□□ 0.39
CLK3-210ENST00000563112 TRUB2O95900 331 aaKnown RBP17.48■□□□□ 0.39
CLK3-210ENST00000563112 MOCS2O96007 188 aaPredicted RBP17.48■□□□□ 0.39
CLK3-210ENST00000563112 TPM2P07951 284 aa17.48■□□□□ 0.39
CLK3-210ENST00000563112 POLR2EP19388 210 aaKnown RBP17.48■□□□□ 0.39
CLK3-210ENST00000563112 SLC6A4P31645 630 aa17.48■□□□□ 0.39
CLK3-210ENST00000563112 CLCN1P35523 988 aa17.48■□□□□ 0.39
CLK3-210ENST00000563112 CDK17Q00537 523 aa17.48■□□□□ 0.39
CLK3-210ENST00000563112 ZNF33AQ06730 810 aa17.48■□□□□ 0.39
CLK3-210ENST00000563112 RAPGEF1Q13905 1077 aa17.48■□□□□ 0.39
CLK3-210ENST00000563112 FNDC3BQ53EP0 1204 aaKnown RBP17.48■□□□□ 0.39
CLK3-210ENST00000563112 DCAF6Q58WW2 860 aa17.48■□□□□ 0.39
CLK3-210ENST00000563112 TCP11X2Q5H9J9 407 aa17.48■□□□□ 0.39
CLK3-210ENST00000563112 PPM1JQ5JR12 505 aa17.48■□□□□ 0.39
CLK3-210ENST00000563112 TMEM215Q68D42 235 aa17.48■□□□□ 0.39
CLK3-210ENST00000563112 NADSYN1Q6IA69 706 aa17.48■□□□□ 0.39
CLK3-210ENST00000563112 MFN1Q8IWA4 741 aa17.48■□□□□ 0.39
CLK3-210ENST00000563112 FAM71AQ8IYT1 594 aa17.48■□□□□ 0.39
CLK3-210ENST00000563112 WDTC1Q8N5D0 677 aa17.48■□□□□ 0.39
CLK3-210ENST00000563112 ATP6V0D2Q8N8Y2 350 aa17.48■□□□□ 0.39
CLK3-210ENST00000563112 ENOX1Q8TC92 643 aaKnown RBP17.48■□□□□ 0.39
CLK3-210ENST00000563112 PRCCQ92733 491 aaPredicted RBP17.48■□□□□ 0.39
CLK3-210ENST00000563112 SIPA1Q96FS4 1042 aa17.48■□□□□ 0.39
CLK3-210ENST00000563112 CPXM1Q96SM3 734 aa17.48■□□□□ 0.39
CLK3-210ENST00000563112 SLC6A17Q9H1V8 727 aa17.48■□□□□ 0.39
CLK3-210ENST00000563112 FAM204AQ9H8W3 233 aa17.48■□□□□ 0.39
CLK3-210ENST00000563112 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.48■□□□□ 0.39
CLK3-210ENST00000563112 ASNSD1Q9NWL6 643 aa17.48■□□□□ 0.39
CLK3-210ENST00000563112 EVLQ9UI08 416 aaPredicted RBP17.48■□□□□ 0.39
CLK3-210ENST00000563112 DNAH14Q0VDD8 3507 aa17.48■□□□□ 0.39
CLK3-210ENST00000563112 CEP192Q8TEP8 1941 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 LNP1A1A4G5 178 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 PATE3B3GLJ2 98 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 HSF2BPO75031 334 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 SLC2A3P11169 496 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 ACADMP11310 421 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 KCNA4P22459 653 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 ITPKAP23677 461 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 HOXD12P35452 270 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 SGSHP51688 502 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 LMAN2Q12907 356 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 DRAP1Q14919 205 aaPredicted RBP17.47■□□□□ 0.39
CLK3-210ENST00000563112 ZC3H12AQ5D1E8 599 aaKnown RBP17.47■□□□□ 0.39
CLK3-210ENST00000563112 TRIM61Q5EBN2 209 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 MS4A13Q5J8X5 152 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 DAB2IPQ5VWQ8 1189 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 MBLAC2Q68D91 279 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 OR6B2Q6IFH4 312 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 C11orf57Q6ZUT1 292 aaPredicted RBP17.47■□□□□ 0.39
CLK3-210ENST00000563112 RABEPKQ7Z6M1 372 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 KIAA0907Q7Z7F0 614 aaPredicted RBP17.47■□□□□ 0.39
CLK3-210ENST00000563112 SLC47A2Q86VL8 602 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 TMPRSS6Q8IU80 811 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 DEFB106AQ8N104 65 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 CARNMT1Q8N4J0 409 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 DEFB119Q8N690 84 aa17.47■□□□□ 0.39
CLK3-210ENST00000563112 C1orf131Q8NDD1 294 aaKnown RBP17.47■□□□□ 0.39
CLK3-210ENST00000563112 FIBINQ8TAL6 211 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms