RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 PPFIA1Q13136 1202 aa6.4□□□□□ -1.38
CHD9-205ENST00000562785 CYP1B1Q16678 543 aa6.4□□□□□ -1.38
CHD9-205ENST00000562785 ST3GAL2Q16842 350 aa6.4□□□□□ -1.38
CHD9-205ENST00000562785 KLHL17Q6TDP4 642 aa6.4□□□□□ -1.38
CHD9-205ENST00000562785 RFX8Q6ZV50 586 aa6.4□□□□□ -1.38
CHD9-205ENST00000562785 NRSN1Q8IZ57 195 aa6.4□□□□□ -1.38
CHD9-205ENST00000562785 SLC44A3Q8N4M1 653 aa6.4□□□□□ -1.38
CHD9-205ENST00000562785 C11orf44Q8N8P7 122 aa6.4□□□□□ -1.38
CHD9-205ENST00000562785 TFAP2BQ92481 460 aa6.4□□□□□ -1.38
CHD9-205ENST00000562785 TRIM63Q969Q1 353 aa6.4□□□□□ -1.38
CHD9-205ENST00000562785 GCC1Q96CN9 775 aa6.4□□□□□ -1.38
CHD9-205ENST00000562785 WDYHV1Q96HA8 205 aa6.4□□□□□ -1.38
CHD9-205ENST00000562785 RTKNQ9BST9 563 aa6.4□□□□□ -1.38
CHD9-205ENST00000562785 ZNF747Q9BV97 191 aa6.4□□□□□ -1.38
CHD9-205ENST00000562785 PRDM8Q9NQV8 689 aa6.4□□□□□ -1.38
CHD9-205ENST00000562785 NKX1-2Q9UD57 310 aaPredicted RBP6.4□□□□□ -1.38
CHD9-205ENST00000562785 DLG5Q8TDM6 1919 aa6.4□□□□□ -1.39
CHD9-205ENST00000562785 MAP3K5Q99683 1374 aa6.4□□□□□ -1.39
CHD9-205ENST00000562785 NRAPQ86VF7 1730 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 RGPD5Q99666 1765 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 PNMA6EA0A0J9YXQ4 647 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 GRID2IPA4D2P6 1211 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 KIAA0355O15063 1070 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 TAF5LO75529 589 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 URI1O94763 535 aaPredicted RBP6.39□□□□□ -1.39
CHD9-205ENST00000562785 GKP32189 559 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 TPTEP56180 551 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 ARL4CP56559 192 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 RIPK4P57078 832 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 KRTAP10-2P60368 255 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 EIF4A1P60842 406 aaKnown RBP6.39□□□□□ -1.39
CHD9-205ENST00000562785 MPP3Q13368 585 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 GRM4Q14833 912 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 TRIM60Q495X7 471 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 LCE4AQ5TA78 99 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 IGFL4Q6B9Z1 124 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 DPY19L3Q6ZPD9 716 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 USP51Q70EK9 711 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 SLC44A2Q8IWA5 706 aaPredicted RBP6.39□□□□□ -1.39
CHD9-205ENST00000562785 RP9Q8TA86 221 aaKnown RBP6.39□□□□□ -1.39
CHD9-205ENST00000562785 XAGE5Q8WWM1 108 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 CTHRC1Q96CG8 243 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 DDX23Q9BUQ8 820 aaKnown RBP6.39□□□□□ -1.39
CHD9-205ENST00000562785 KRTAP9-9Q9BYP9 154 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 KRTAP9-4Q9BYQ2 154 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 PABPC3Q9H361 631 aaKnown RBP6.39□□□□□ -1.39
CHD9-205ENST00000562785 MLXIPQ9HAP2 919 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 SRP68Q9UHB9 627 aaKnown RBP6.39□□□□□ -1.39
CHD9-205ENST00000562785 JCADQ9P266 1359 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 COL4A3Q01955 1670 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 ADAMTS7Q9UKP4 1686 aa6.39□□□□□ -1.39
CHD9-205ENST00000562785 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.39□□□□□ -1.39
CHD9-205ENST00000562785 KRTAP9-7A8MTY7 169 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 IRAK2O43187 625 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 SPRY2O43597 315 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 HTATSF1O43719 755 aaKnown RBP6.38□□□□□ -1.39
CHD9-205ENST00000562785 PMPCBO75439 489 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 ZNF202O95125 648 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 TMEM225BP0DP42 221 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 NR2F6P10588 404 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 GYS1P13807 737 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 CST5P28325 142 aaPredicted RBP6.38□□□□□ -1.39
CHD9-205ENST00000562785 CTGFP29279 349 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 PBX1P40424 430 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 AP2B1P63010 937 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 CSHL1Q14406 222 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 PLAC9Q5JTB6 97 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 KAZNQ674X7 775 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 RINT1Q6NUQ1 792 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 ZNF551Q7Z340 670 aaPredicted RBP6.38□□□□□ -1.39
CHD9-205ENST00000562785 TTC30AQ86WT1 665 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 CLASRPQ8N2M8 674 aaKnown RBP6.38□□□□□ -1.39
CHD9-205ENST00000562785 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.38□□□□□ -1.39
CHD9-205ENST00000562785 PRR25Q96S07 402 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 DPCDQ9BVM2 203 aaPredicted RBP6.38□□□□□ -1.39
CHD9-205ENST00000562785 ZNF341Q9BYN7 854 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 CYP4F11Q9HBI6 524 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 ARHGEF3Q9NR81 526 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 SAGE1Q9NXZ1 904 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 EPN1Q9Y6I3 576 aaPredicted RBP6.38□□□□□ -1.39
CHD9-205ENST00000562785 WDR17Q8IZU2 1322 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 CRB1P82279 1406 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 RGPD2P0DJD1 1756 aa6.38□□□□□ -1.39
CHD9-205ENST00000562785 MRC1P22897 1456 aa6.37□□□□□ -1.39
CHD9-205ENST00000562785 SPATA31A6Q5VVP1 1343 aa6.37□□□□□ -1.39
CHD9-205ENST00000562785 GXYLT2A0PJZ3 443 aa6.37□□□□□ -1.39
CHD9-205ENST00000562785 NPIPB8E9PQR5 432 aa6.37□□□□□ -1.39
CHD9-205ENST00000562785 FAM155BO75949 473 aa6.37□□□□□ -1.39
CHD9-205ENST00000562785 ESRRBO95718 433 aa6.37□□□□□ -1.39
CHD9-205ENST00000562785 DLDP09622 509 aaKnown RBP6.37□□□□□ -1.39
CHD9-205ENST00000562785 YY1P25490 414 aa6.37□□□□□ -1.39
CHD9-205ENST00000562785 MPLP40238 635 aa6.37□□□□□ -1.39
CHD9-205ENST00000562785 SEC24CP53992 1094 aa6.37□□□□□ -1.39
CHD9-205ENST00000562785 MRPS35P82673 323 aaKnown RBP6.37□□□□□ -1.39
CHD9-205ENST00000562785 TIGD6Q17RP2 521 aa6.37□□□□□ -1.39
CHD9-205ENST00000562785 AASDHQ4L235 1098 aaPredicted RBP6.37□□□□□ -1.39
CHD9-205ENST00000562785 TMEM196Q5HYL7 178 aa6.37□□□□□ -1.39
CHD9-205ENST00000562785 ATPAF1Q5TC12 328 aaPredicted RBP6.37□□□□□ -1.39
CHD9-205ENST00000562785 Q6ZWC4 215 aa6.37□□□□□ -1.39
CHD9-205ENST00000562785 WDR53Q7Z5U6 358 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms