RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 MED30Q96HR3 178 aa3.64□□□□□ -1.83
HDGFL3-202ENST00000562702 CINPQ9BW66 212 aaPredicted RBP3.64□□□□□ -1.83
HDGFL3-202ENST00000562702 PCDHAC1Q9H158 963 aa3.64□□□□□ -1.83
HDGFL3-202ENST00000562702 GAR1Q9NY12 217 aaKnown RBP3.64□□□□□ -1.83
HDGFL3-202ENST00000562702 MAN2B2Q9Y2E5 1009 aa3.64□□□□□ -1.83
HDGFL3-202ENST00000562702 NOTCH3Q9UM47 2321 aa3.64□□□□□ -1.83
HDGFL3-202ENST00000562702 FER1L4A9Z1Z3 1794 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 IFIT2P09913 472 aaKnown RBP3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 ARP10275 920 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 APEHP13798 732 aaKnown RBP3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 YY1P25490 414 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 EEF1GP26641 437 aaKnown RBP3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 GABRB3P28472 473 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 ENTPD1P49961 510 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 YPEL5P62699 121 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 CFHR3Q02985 330 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 HDAC1Q13547 482 aaPredicted RBP3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 ACOX1Q15067 660 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 SEC23BQ15437 767 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 SLC5A9Q2M3M2 681 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 MAP9Q49MG5 647 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 OTUD3Q5T2D3 398 aaPredicted RBP3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 KIAA0408Q6ZU52 694 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 SRLQ86TD4 932 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 TMPRSS12Q86WS5 348 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 C12orf76Q8N812 135 aaPredicted RBP3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 SUN3Q8TAQ9 357 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 DEPTORQ8TB45 409 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 NUDCD2Q8WVJ2 157 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 GRAMD1AQ96CP6 724 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 HIC2Q96JB3 615 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 ELAC2Q9BQ52 826 aaKnown RBP3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 TUBB6Q9BUF5 446 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 AS3MTQ9HBK9 375 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 TMEM45AQ9NWC5 275 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 ZMYND8Q9ULU4 1186 aaPredicted RBP3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 ICAM5Q9UMF0 924 aa3.63□□□□□ -1.83
HDGFL3-202ENST00000562702 FAM234BA2RU67 622 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 PODXLO00592 558 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 HNRNPDLO14979 420 aaKnown RBP3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 INPPL1O15357 1258 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 ZSCAN9O15535 394 aaPredicted RBP3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 NDST3O95803 873 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 VIPP01282 170 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 TNFRSF1BP20333 461 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 RRP1P56182 461 aaKnown RBP3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 DEUP1Q05D60 604 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 NSUN2Q08J23 767 aaKnown RBP eCLIP3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 CCDC15Q0P6D6 951 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 ATP1A4Q13733 1029 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 MAPKAPK3Q16644 382 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 ARL6IP4Q66PJ3 421 aaKnown RBP3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 TLDC1Q6P9B6 456 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 RFX8Q6ZV50 586 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 NOL8Q76FK4 1167 aaKnown RBP3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 SPATA2LQ8IUW3 424 aaPredicted RBP3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 FAM186BQ8IYM0 893 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 FAM71DQ8N9W8 422 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 SVIPQ8NHG7 77 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 ASB5Q8WWX0 329 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 GJA10Q969M2 543 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 EDC3Q96F86 508 aaKnown RBP3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 WDR24Q96S15 920 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 SF3B5Q9BWJ5 86 aaKnown RBP3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 ZNF700Q9H0M5 742 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 USP29Q9HBJ7 922 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 NLRC4Q9NPP4 1024 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 NECTIN3Q9NQS3 549 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 TM7SF3Q9NS93 570 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 RGL1Q9NZL6 768 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 CA14Q9ULX7 337 aa3.62□□□□□ -1.83
HDGFL3-202ENST00000562702 OR2W5A6NFC9 320 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 SPTLC2O15270 562 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 CA12O43570 354 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 TMIGD3P0DMS9 266 aaPredicted RBP3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 PLA2G2AP14555 144 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 DRD1P21728 446 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 HSPA7P48741 367 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 GPC5P78333 572 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 PPATQ06203 517 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 MTAPQ13126 283 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 MFSD13AQ14CX5 517 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 MPEG1Q2M385 716 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 AASDHQ4L235 1098 aaPredicted RBP3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 RAP1GAP2Q684P5 730 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 GRHL2Q6ISB3 625 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 TRAPPC11Q7Z392 1133 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 TTC30AQ86WT1 665 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 SKAP1Q86WV1 359 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 GLIS1Q8NBF1 620 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 SGCZQ96LD1 299 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 GDF15Q99988 308 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 NUDT22Q9BRQ3 303 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 MYLK2Q9H1R3 596 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 ARFGAP3Q9NP61 516 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 WNT16Q9UBV4 365 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 ASAP1Q9ULH1 1129 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 FZD4Q9ULV1 537 aa3.61□□□□□ -1.83
HDGFL3-202ENST00000562702 PCDHGB2Q9Y5G2 931 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms