RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 NPY6RQ99463 290 aa17.03■□□□□ 0.32
PKD1-226ENST00000562425 ANP32EQ9BTT0 268 aa17.03■□□□□ 0.32
PKD1-226ENST00000562425 FAM126AQ9BYI3 521 aaPredicted RBP17.03■□□□□ 0.32
PKD1-226ENST00000562425 PRMT8Q9NR22 394 aaPredicted RBP17.03■□□□□ 0.32
PKD1-226ENST00000562425 TMEM59LQ9UK28 342 aa17.03■□□□□ 0.32
PKD1-226ENST00000562425 FBXO10Q9UK96 956 aa17.03■□□□□ 0.32
PKD1-226ENST00000562425 SYNJ2BP-COX16A0A087WUM0 186 aa17.02■□□□□ 0.32
PKD1-226ENST00000562425 ANKRD62A6NC57 917 aa17.02■□□□□ 0.32
PKD1-226ENST00000562425 KCNU1A8MYU2 1149 aa17.02■□□□□ 0.32
PKD1-226ENST00000562425 PAPSS2O95340 614 aaPredicted RBP17.02■□□□□ 0.32
PKD1-226ENST00000562425 TPM1P09493 284 aa17.02■□□□□ 0.32
PKD1-226ENST00000562425 KRT3P12035 628 aa17.02■□□□□ 0.32
PKD1-226ENST00000562425 SULT1E1P49888 294 aa17.02■□□□□ 0.32
PKD1-226ENST00000562425 NRLP54845 237 aa17.02■□□□□ 0.32
PKD1-226ENST00000562425 GSCP56915 257 aaPredicted RBP17.02■□□□□ 0.32
PKD1-226ENST00000562425 PITX1P78337 314 aaPredicted RBP17.02■□□□□ 0.32
PKD1-226ENST00000562425 PUM1Q14671 1186 aaKnown RBP eCLIP17.02■□□□□ 0.324e-6■□□□□ 8.5
PKD1-226ENST00000562425 DGLUCYQ7Z3D6 616 aa17.02■□□□□ 0.32
PKD1-226ENST00000562425 CCDC117Q8IWD4 279 aaPredicted RBP17.02■□□□□ 0.32
PKD1-226ENST00000562425 KIAA2013Q8IYS2 634 aa17.02■□□□□ 0.32
PKD1-226ENST00000562425 PHTF2Q8N3S3 785 aa17.02■□□□□ 0.32
PKD1-226ENST00000562425 RPLP0P6Q8NHW5 317 aa17.02■□□□□ 0.32
PKD1-226ENST00000562425 USP33Q8TEY7 942 aa17.02■□□□□ 0.32
PKD1-226ENST00000562425 NT5C3BQ969T7 300 aa17.02■□□□□ 0.32
PKD1-226ENST00000562425 PGAP3Q96FM1 320 aaPredicted RBP17.02■□□□□ 0.32
PKD1-226ENST00000562425 HINFPQ9BQA5 517 aa17.02■□□□□ 0.32
PKD1-226ENST00000562425 SYT11Q9BT88 431 aa17.02■□□□□ 0.32
PKD1-226ENST00000562425 SELENOOQ9BVL4 669 aa17.02■□□□□ 0.32
PKD1-226ENST00000562425 METTL5Q9NRN9 209 aaKnown RBP17.02■□□□□ 0.32
PKD1-226ENST00000562425 COX16Q9P0S2 106 aa17.02■□□□□ 0.32
PKD1-226ENST00000562425 SLC8A2Q9UPR5 921 aa17.02■□□□□ 0.32
PKD1-226ENST00000562425 SLC27A6Q9Y2P4 619 aa17.02■□□□□ 0.32
PKD1-226ENST00000562425 TPRP12270 2363 aaKnown RBP17.02■□□□□ 0.31
PKD1-226ENST00000562425 GOLGA6L7A0A1B0GV03 622 aa17.01■□□□□ 0.31
PKD1-226ENST00000562425 GFRA2O00451 464 aa17.01■□□□□ 0.31
PKD1-226ENST00000562425 CISD3P0C7P0 127 aa17.01■□□□□ 0.31
PKD1-226ENST00000562425 GZMAP12544 262 aa17.01■□□□□ 0.31
PKD1-226ENST00000562425 FLT3P36888 993 aa17.01■□□□□ 0.31
PKD1-226ENST00000562425 SEC13P55735 322 aa17.01■□□□□ 0.31
PKD1-226ENST00000562425 SATB1Q01826 763 aa17.01■□□□□ 0.31
PKD1-226ENST00000562425 DEUP1Q05D60 604 aa17.01■□□□□ 0.31
PKD1-226ENST00000562425 PTP4A2Q12974 167 aa17.01■□□□□ 0.31
PKD1-226ENST00000562425 C2orf27AQ580R0 203 aa17.01■□□□□ 0.31
PKD1-226ENST00000562425 TDRD12Q587J7 1177 aaKnown RBP17.01■□□□□ 0.31
PKD1-226ENST00000562425 FAM133BQ5BKY9 247 aaKnown RBP17.01■□□□□ 0.31
PKD1-226ENST00000562425 BRMS1LQ5PSV4 323 aa17.01■□□□□ 0.31
PKD1-226ENST00000562425 C10orf76Q5T2E6 689 aa17.01■□□□□ 0.31
PKD1-226ENST00000562425 PIK3R6Q5UE93 754 aa17.01■□□□□ 0.31
PKD1-226ENST00000562425 MON1BQ7L1V2 547 aa17.01■□□□□ 0.31
PKD1-226ENST00000562425 SYT13Q7L8C5 426 aa17.01■□□□□ 0.31
PKD1-226ENST00000562425 ZNF571Q7Z3V5 609 aaPredicted RBP17.01■□□□□ 0.31
PKD1-226ENST00000562425 TRMT11Q7Z4G4 463 aaKnown RBP17.01■□□□□ 0.31
PKD1-226ENST00000562425 MAML2Q8IZL2 1156 aaPredicted RBP17.01■□□□□ 0.31
PKD1-226ENST00000562425 HJURPQ8NCD3 748 aaPredicted RBP17.01■□□□□ 0.31
PKD1-226ENST00000562425 C3orf20Q8ND61 904 aa17.01■□□□□ 0.31
PKD1-226ENST00000562425 WDCPQ9H6R7 721 aa17.01■□□□□ 0.31
PKD1-226ENST00000562425 MYOFQ9NZM1 2061 aa17■□□□□ 0.31
PKD1-226ENST00000562425 SIGLEC16A6NMB1 481 aa17■□□□□ 0.31
PKD1-226ENST00000562425 GYPCP04921 128 aa17■□□□□ 0.31
PKD1-226ENST00000562425 SERPING1P05155 500 aa17■□□□□ 0.31
PKD1-226ENST00000562425 SKILP12757 684 aa17■□□□□ 0.31
PKD1-226ENST00000562425 PDGFRAP16234 1089 aa17■□□□□ 0.31
PKD1-226ENST00000562425 SDC4P31431 198 aa17■□□□□ 0.31
PKD1-226ENST00000562425 SLC6A4P31645 630 aa17■□□□□ 0.31
PKD1-226ENST00000562425 CASP14P31944 242 aa17■□□□□ 0.31
PKD1-226ENST00000562425 CXCR3P49682 368 aa17■□□□□ 0.31
PKD1-226ENST00000562425 MESP2Q0VG99 397 aa17■□□□□ 0.31
PKD1-226ENST00000562425 TSR1Q2NL82 804 aaKnown RBP17■□□□□ 0.31
PKD1-226ENST00000562425 MS4A13Q5J8X5 152 aa17■□□□□ 0.31
PKD1-226ENST00000562425 ACBD5Q5T8D3 534 aaPredicted RBP17■□□□□ 0.31
PKD1-226ENST00000562425 E4F1Q66K89 784 aaPredicted RBP17■□□□□ 0.31
PKD1-226ENST00000562425 NADSYN1Q6IA69 706 aa17■□□□□ 0.31
PKD1-226ENST00000562425 SDE2Q6IQ49 451 aa17■□□□□ 0.31
PKD1-226ENST00000562425 RFWD3Q6PCD5 774 aa17■□□□□ 0.31
PKD1-226ENST00000562425 PHLDB2Q86SQ0 1253 aa17■□□□□ 0.31
PKD1-226ENST00000562425 CHSY1Q86X52 802 aa17■□□□□ 0.31
PKD1-226ENST00000562425 VSTM4Q8IW00 320 aa17■□□□□ 0.31
PKD1-226ENST00000562425 MCOLN2Q8IZK6 566 aa17■□□□□ 0.31
PKD1-226ENST00000562425 UCMAQ8WVF2 138 aa17■□□□□ 0.31
PKD1-226ENST00000562425 TBCBQ99426 244 aa17■□□□□ 0.31
PKD1-226ENST00000562425 TRIM5Q9C035 493 aa17■□□□□ 0.31
PKD1-226ENST00000562425 STARD13Q9Y3M8 1113 aa17■□□□□ 0.31
PKD1-226ENST00000562425 PCDHGA2Q9Y5H1 932 aa17■□□□□ 0.31
PKD1-226ENST00000562425 CACNA1BQ00975 2339 aa16.99■□□□□ 0.31
PKD1-226ENST00000562425 F5H5T6 163 aa16.99■□□□□ 0.31
PKD1-226ENST00000562425 TRIM24O15164 1050 aa16.99■□□□□ 0.31
PKD1-226ENST00000562425 TIMM44O43615 452 aa16.99■□□□□ 0.31
PKD1-226ENST00000562425 TBL1XO60907 577 aa16.99■□□□□ 0.31
PKD1-226ENST00000562425 RTN2O75298 545 aa16.99■□□□□ 0.31
PKD1-226ENST00000562425 DESP17661 470 aa16.99■□□□□ 0.31
PKD1-226ENST00000562425 TACR2P21452 398 aa16.99■□□□□ 0.31
PKD1-226ENST00000562425 HOXD9P28356 352 aaPredicted RBP16.99■□□□□ 0.31
PKD1-226ENST00000562425 HOXA6P31267 233 aa16.99■□□□□ 0.31
PKD1-226ENST00000562425 TIE1P35590 1138 aa16.99■□□□□ 0.31
PKD1-226ENST00000562425 KIR2DL1P43626 348 aaPredicted RBP16.99■□□□□ 0.31
PKD1-226ENST00000562425 EOGTQ5NDL2 527 aa16.99■□□□□ 0.31
PKD1-226ENST00000562425 RAP1GAP2Q684P5 730 aa16.99■□□□□ 0.31
PKD1-226ENST00000562425 DNAJC24Q6P3W2 148 aa16.99■□□□□ 0.31
PKD1-226ENST00000562425 SARM1Q6SZW1 724 aa16.99■□□□□ 0.31
PKD1-226ENST00000562425 ANKS1BQ7Z6G8 1248 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms