RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 ABCE1P61221 599 aaKnown RBP14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 FOLH1Q04609 750 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 SLC10A2Q12908 348 aaPredicted RBP14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 ANKRD20A4Q4UJ75 823 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 SPATA24Q86W54 205 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 NCAPG2Q86XI2 1143 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 C12orf29Q8N999 325 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 TFB1MQ8WVM0 346 aaKnown RBP14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 NMD3Q96D46 503 aaKnown RBP14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 HPDLQ96IR7 371 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 HAPLN3Q96S86 360 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 RNPEPQ9H4A4 650 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 CYP3A43Q9HB55 503 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 PTPRHQ9HD43 1115 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 MAN1C1Q9NR34 630 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 CLIC5Q9NZA1 410 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 TMEM216Q9P0N5 145 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 ARHGAP26Q9UNA1 814 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 FZD1Q9UP38 647 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 DTNAQ9Y4J8 743 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 E9PBE3 544 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 KLHL41O60662 606 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 GMPRP36959 345 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 DEUP1Q05D60 604 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 LSAMPQ13449 338 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 GOLGA7BQ2TAP0 167 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 ATG14Q6ZNE5 492 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 SCUBE3Q8IX30 993 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 TBCBQ99426 244 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 GBA2Q9HCG7 927 aaPredicted RBP14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 COPG2Q9UBF2 871 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 PACSIN3Q9UKS6 424 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 ADAMTS5Q9UNA0 930 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 PSAT1Q9Y617 370 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 FER1L6Q2WGJ9 1857 aa14.37□□□□□ -0.11
VPS9D1-202ENST00000561976 CAPN8A6NHC0 703 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 OR6B1O95007 311 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 ITGA2BP08514 1039 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 COX4I1P13073 169 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 USP4Q13107 963 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 MAP7Q14244 749 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 GRM2Q14416 872 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 STILQ15468 1287 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 FSCBQ5H9T9 825 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 ISLR2Q6UXK2 745 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 DNERQ8NFT8 737 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 PIP4K2CQ8TBX8 421 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 TRAPPC12Q8WVT3 735 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 FAM167AQ96KS9 214 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 WRNIP1Q96S55 665 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 KCNK16Q96T55 309 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 BARX2Q9UMQ3 279 aaPredicted RBP14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 INPP5FQ9Y2H2 1132 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 TBC1D30Q9Y2I9 924 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 CREB3O43889 395 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 STAG3L1P0CL83 205 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 VAV1P15498 845 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 PTPRAP18433 802 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 MX2P20592 715 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 MGAT1P26572 445 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 ARRB2P32121 409 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 BTKQ06187 659 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 SEMA5AQ13591 1074 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 FBXL19Q6PCT2 694 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 LCLAT1Q6UWP7 414 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 AGR3Q8TD06 166 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 MAGEB5Q9BZ81 275 aa14.36□□□□□ -0.11
VPS9D1-202ENST00000561976 C15orf38-AP3S2A0A0A6YYH1 394 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 GPR25O00155 361 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 CSDE1O75534 798 aaKnown RBP14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 HSPA4LO95757 839 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 CPA3P15088 417 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 ALDH1A3P47895 512 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 SH3BGRP55822 239 aaPredicted RBP14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 NIPAL4Q0D2K0 466 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 LY6KQ17RY6 165 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 PMF1Q6P1K2 205 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 ARPINQ7Z6K5 226 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 DRAXINQ8NBI3 349 aaPredicted RBP14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 COG4Q9H9E3 785 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 ZNF358Q9NW07 568 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 SMIM31A0A1B0GVY4 71 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 CCDC160A6NGH7 325 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 MDM4O15151 490 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 PEX10O60683 326 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 ALDH1A2O94788 518 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 ZFXP17010 805 aaPredicted RBP14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 TFE3P19532 575 aaPredicted RBP14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 ATICP31939 592 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 RANBP1P43487 201 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 HDAC4P56524 1084 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 UGT2A3Q6UWM9 527 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 OLFML1Q6UWY5 402 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 CATSPERGQ6ZRH7 1159 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 CYS1Q717R9 158 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 ATXN7L3BQ96GX2 97 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 NT5C1AQ9BXI3 368 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 FZD8Q9H461 694 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 OCEL1Q9H607 264 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms