RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 PDK2Q15119 407 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 SKIV2LQ15477 1246 aaKnown RBP13.11□□□□□ -0.31
CMTM4-203ENST00000561680 ZNF77Q15935 545 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 ACBD5Q5T8D3 534 aaPredicted RBP13.11□□□□□ -0.31
CMTM4-203ENST00000561680 PIK3R6Q5UE93 754 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 PYROXD2Q8N2H3 581 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 RIN3Q8TB24 985 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 SH3RF2Q8TEC5 729 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 RAPGEF5Q92565 580 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 TSC1Q92574 1164 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 RBM41Q96IZ5 413 aaKnown RBP13.11□□□□□ -0.31
CMTM4-203ENST00000561680 MYADMQ96S97 322 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 KCTD15Q96SI1 283 aaPredicted RBP13.11□□□□□ -0.31
CMTM4-203ENST00000561680 OSBPL9Q96SU4 736 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 MAGEB5Q9BZ81 275 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 DCLK3Q9C098 648 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 DHX35Q9H5Z1 703 aaKnown RBP13.11□□□□□ -0.31
CMTM4-203ENST00000561680 TRPV4Q9HBA0 871 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 PCDH18Q9HCL0 1135 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 CFAP97Q9P2B7 532 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 SLC12A6Q9UHW9 1150 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 STOML2Q9UJZ1 356 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 HS3ST4Q9Y661 456 aa13.11□□□□□ -0.31
CMTM4-203ENST00000561680 ANKRD36A6QL64 1941 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 E2F8A0AVK6 867 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 ZNF487B1APH4 448 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 PI4K2BG5E9Z4 385 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 CES2O00748 559 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 MBTPS2O43462 519 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 ACSL4O60488 711 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 ZRANB2O95218 330 aaKnown RBP eCLIP13.1□□□□□ -0.31
CMTM4-203ENST00000561680 CD48P09326 243 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 PRLRP16471 622 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 TCP1P17987 556 aaKnown RBP13.1□□□□□ -0.31
CMTM4-203ENST00000561680 FCARP24071 287 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 KDELR1P24390 212 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 PTPN7P35236 360 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 SLC11A2P49281 568 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 ZNF135P52742 658 aaPredicted RBP13.1□□□□□ -0.31
CMTM4-203ENST00000561680 COPS2P61201 443 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 DPYSL3Q14195 570 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 KRT81Q14533 505 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 TAZQ16635 292 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 FAM133BQ5BKY9 247 aaKnown RBP13.1□□□□□ -0.31
CMTM4-203ENST00000561680 MS4A13Q5J8X5 152 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 FAM78AQ5JUQ0 283 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 ZFYVE27Q5T4F4 411 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 ARTNQ5T4W7 220 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 MANEALQ5VSG8 457 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 NADSYN1Q6IA69 706 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 MFSD7Q6UXD7 560 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 HTR3DQ70Z44 454 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 DENND1CQ8IV53 801 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 FAM217AQ8IXS0 508 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 RCOR2Q8IZ40 523 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 CELF5Q8N6W0 485 aaKnown RBP13.1□□□□□ -0.31
CMTM4-203ENST00000561680 KIAA1958Q8N8K9 716 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 KCTD6Q8NC69 237 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 KIF18AQ8NI77 898 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 PPM1EQ8WY54 764 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 SMARCD2Q92925 531 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 HLA-CQ95604 372 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 FAF2Q96CS3 445 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 PBKQ96KB5 322 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 C1orf74Q96LT6 269 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 PSMB7Q99436 277 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 PRMT1Q99873 361 aaKnown RBP13.1□□□□□ -0.31
CMTM4-203ENST00000561680 ZNF670Q9BS34 389 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 RCOR3Q9P2K3 495 aaPredicted RBP13.1□□□□□ -0.31
CMTM4-203ENST00000561680 OR12D3Q9UGF7 316 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 LSM7Q9UK45 103 aaKnown RBP13.1□□□□□ -0.31
CMTM4-203ENST00000561680 AGO1Q9UL18 857 aaKnown RBP13.1□□□□□ -0.31
CMTM4-203ENST00000561680 NEU3Q9UQ49 428 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 ZNF510Q9Y2H8 683 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 SH3BP1Q9Y3L3 701 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 SNX10Q9Y5X0 201 aa13.1□□□□□ -0.31
CMTM4-203ENST00000561680 ZFP37Q9Y6Q3 630 aaPredicted RBP13.1□□□□□ -0.31
CMTM4-203ENST00000561680 FAM72CH0Y354 149 aa13.09□□□□□ -0.31
CMTM4-203ENST00000561680 PYGMP11217 842 aa13.09□□□□□ -0.31
CMTM4-203ENST00000561680 HOXC13P31276 330 aa13.09□□□□□ -0.31
CMTM4-203ENST00000561680 SLC6A4P31645 630 aa13.09□□□□□ -0.31
CMTM4-203ENST00000561680 CXCR5P32302 372 aa13.09□□□□□ -0.31
CMTM4-203ENST00000561680 GBP2P32456 591 aaPredicted RBP13.09□□□□□ -0.31
CMTM4-203ENST00000561680 HTR7P34969 479 aa13.09□□□□□ -0.31
CMTM4-203ENST00000561680 GGCXP38435 758 aa13.09□□□□□ -0.31
CMTM4-203ENST00000561680 CDKN2BP42772 138 aa13.09□□□□□ -0.31
CMTM4-203ENST00000561680 MLLT6P55198 1093 aaPredicted RBP13.09□□□□□ -0.31
CMTM4-203ENST00000561680 ZNF211Q13398 564 aaPredicted RBP13.09□□□□□ -0.31
CMTM4-203ENST00000561680 PPP2R5EQ16537 467 aa13.09□□□□□ -0.31
CMTM4-203ENST00000561680 ODF2Q5BJF6 829 aa13.09□□□□□ -0.31
CMTM4-203ENST00000561680 TFDP3Q5H9I0 405 aa13.09□□□□□ -0.31
CMTM4-203ENST00000561680 PPP6R3Q5H9R7 873 aaPredicted RBP13.09□□□□□ -0.31
CMTM4-203ENST00000561680 SEL1L2Q5TEA6 688 aa13.09□□□□□ -0.31
CMTM4-203ENST00000561680 FAM72AQ5TYM5 149 aa13.09□□□□□ -0.31
CMTM4-203ENST00000561680 FAM72DQ6L9T8 149 aa13.09□□□□□ -0.31
CMTM4-203ENST00000561680 SPOCD1Q6ZMY3 1216 aa13.09□□□□□ -0.31
CMTM4-203ENST00000561680 ANKS1BQ7Z6G8 1248 aa13.09□□□□□ -0.31
CMTM4-203ENST00000561680 CHSY1Q86X52 802 aa13.09□□□□□ -0.31
CMTM4-203ENST00000561680 FAM72BQ86X60 149 aa13.09□□□□□ -0.31
CMTM4-203ENST00000561680 CCDC50Q8IVM0 306 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms