RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 SOX5P35711 763 aa16.07■□□□□ 0.16
CCDC113-203ENST00000561517 WASP42768 502 aa16.07■□□□□ 0.16
CCDC113-203ENST00000561517 CDK17Q00537 523 aa16.07■□□□□ 0.16
CCDC113-203ENST00000561517 E2F5Q15329 346 aa16.07■□□□□ 0.16
CCDC113-203ENST00000561517 ZC3H12AQ5D1E8 599 aaKnown RBP16.07■□□□□ 0.16
CCDC113-203ENST00000561517 TAF3Q5VWG9 929 aa16.07■□□□□ 0.16
CCDC113-203ENST00000561517 TMEM215Q68D42 235 aa16.07■□□□□ 0.16
CCDC113-203ENST00000561517 KIAA0907Q7Z7F0 614 aaPredicted RBP16.07■□□□□ 0.16
CCDC113-203ENST00000561517 C11orf74Q86VG3 221 aa16.07■□□□□ 0.16
CCDC113-203ENST00000561517 ZNF677Q86XU0 584 aa16.07■□□□□ 0.16
CCDC113-203ENST00000561517 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.07■□□□□ 0.16
CCDC113-203ENST00000561517 HMGB4Q8WW32 186 aa16.07■□□□□ 0.16
CCDC113-203ENST00000561517 FUCA2Q9BTY2 467 aa16.07■□□□□ 0.16
CCDC113-203ENST00000561517 PDCL3Q9H2J4 239 aa16.07■□□□□ 0.16
CCDC113-203ENST00000561517 NLRC4Q9NPP4 1024 aa16.07■□□□□ 0.16
CCDC113-203ENST00000561517 ELOVL2Q9NXB9 296 aa16.07■□□□□ 0.16
CCDC113-203ENST00000561517 NOCTQ9UK39 431 aaKnown RBP16.07■□□□□ 0.16
CCDC113-203ENST00000561517 MUC22E2RYF6 1773 aaPredicted RBP16.07■□□□□ 0.16
CCDC113-203ENST00000561517 TNRC6BQ9UPQ9 1833 aaKnown RBP16.07■□□□□ 0.16
CCDC113-203ENST00000561517 TBL1XO60907 577 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 DAB1O75553 588 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 GRAP2O75791 330 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 GFPT2O94808 682 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 EPN2O95208 641 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 APOEP02649 317 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 MMEP08473 750 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 ATP1A3P13637 1013 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 GABRG2P18507 467 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 SCNN1AP37088 669 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 P2RY2P41231 377 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 UBXN1Q04323 297 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 SPEM2Q0P670 501 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 KLHL40Q2TBA0 621 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 MS4A13Q5J8X5 152 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 KIAA1211LQ6NV74 962 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 DHX40Q8IX18 779 aaKnown RBP16.06■□□□□ 0.16
CCDC113-203ENST00000561517 HJURPQ8NCD3 748 aaPredicted RBP16.06■□□□□ 0.16
CCDC113-203ENST00000561517 WFIKKN2Q8TEU8 576 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 BTN2A3PQ96KV6 586 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 PRICKLE1Q96MT3 831 aaPredicted RBP16.06■□□□□ 0.16
CCDC113-203ENST00000561517 NUCKS1Q9H1E3 243 aaKnown RBP16.06■□□□□ 0.16
CCDC113-203ENST00000561517 SYNCQ9H7C4 482 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.06■□□□□ 0.16
CCDC113-203ENST00000561517 CACNA2D2Q9NY47 1150 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 XPO7Q9UIA9 1087 aaKnown RBP16.06■□□□□ 0.16
CCDC113-203ENST00000561517 STON1Q9Y6Q2 735 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 DMXL1Q9Y485 3027 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 CNOT1A5YKK6 2376 aaKnown RBP16.06■□□□□ 0.16
CCDC113-203ENST00000561517 DOCK4Q8N1I0 1966 aa16.06■□□□□ 0.16
CCDC113-203ENST00000561517 SMTNL1A8MU46 457 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 KCNU1A8MYU2 1149 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 WASH3PC4AMC7 463 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 RHOBTB1O94844 696 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 MOCS2O96007 188 aaPredicted RBP16.05■□□□□ 0.16
CCDC113-203ENST00000561517 SLC2A3P11169 496 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 GBP1P32455 592 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 NOS2P35228 1153 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 STAT1P42224 750 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 NOMO3P69849 1222 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 ELF2Q15723 593 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 CSRP2Q16527 193 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 MAP7D1Q3KQU3 841 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 PMS2CLQ68D20 193 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 ERICH1Q86X53 443 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 ATP6V0D2Q8N8Y2 350 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 ZNF557Q8N988 423 aaPredicted RBP16.05■□□□□ 0.16
CCDC113-203ENST00000561517 NEK11Q8NG66 645 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 WFDC5Q8TCV5 224 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 SLC20A1Q8WUM9 679 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 C18orf8Q96DM3 657 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 MYEOVQ96EZ4 313 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 LMLNQ96KR4 655 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 SPAG5Q96R06 1193 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 FAM204AQ9H8W3 233 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 SEMA4GQ9NTN9 838 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 ABCB8Q9NUT2 735 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 DDIT4Q9NX09 232 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 RRN3Q9NYV6 651 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 BCCIPQ9P287 314 aaKnown RBP eCLIP16.05■□□□□ 0.16
CCDC113-203ENST00000561517 GGA2Q9UJY4 613 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 USP18Q9UMW8 372 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 INVSQ9Y283 1065 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 PCDHGA5Q9Y5G8 931 aa16.05■□□□□ 0.16
CCDC113-203ENST00000561517 CYP1A1P04798 512 aaPredicted RBP16.04■□□□□ 0.16
CCDC113-203ENST00000561517 PABPC1P11940 636 aaKnown RBP16.04■□□□□ 0.16
CCDC113-203ENST00000561517 CHRNB2P17787 502 aa16.04■□□□□ 0.16
CCDC113-203ENST00000561517 TACR2P21452 398 aa16.04■□□□□ 0.16
CCDC113-203ENST00000561517 BCKDHBP21953 392 aa16.04■□□□□ 0.16
CCDC113-203ENST00000561517 MATKP42679 507 aa16.04■□□□□ 0.16
CCDC113-203ENST00000561517 IL12RB1P42701 662 aa16.04■□□□□ 0.16
CCDC113-203ENST00000561517 ZNF165P49910 485 aa16.04■□□□□ 0.16
CCDC113-203ENST00000561517 RPS24P62847 133 aaKnown RBP16.04■□□□□ 0.16
CCDC113-203ENST00000561517 FMO1Q01740 532 aa16.04■□□□□ 0.16
CCDC113-203ENST00000561517 CDR2Q01850 454 aa16.04■□□□□ 0.16
CCDC113-203ENST00000561517 BYSLQ13895 437 aaKnown RBP16.04■□□□□ 0.16
CCDC113-203ENST00000561517 ZNF234Q14588 700 aa16.04■□□□□ 0.16
CCDC113-203ENST00000561517 CHST9Q7L1S5 443 aa16.04■□□□□ 0.16
CCDC113-203ENST00000561517 ADIPOR2Q86V24 386 aa16.04■□□□□ 0.16
CCDC113-203ENST00000561517 XYLT1Q86Y38 959 aa16.04■□□□□ 0.16
CCDC113-203ENST00000561517 PGBD3Q8N328 593 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms