RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 NFE2L3Q9Y4A8 694 aa16.61■□□□□ 0.25
LMX1B-204ENST00000561065 CDX4O14627 284 aaPredicted RBP16.6■□□□□ 0.25
LMX1B-204ENST00000561065 MAP3K13O43283 966 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 SART1O43290 800 aaKnown RBP16.6■□□□□ 0.25
LMX1B-204ENST00000561065 NCAM1P13591 858 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 USP8P40818 1118 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 ACADSBP45954 432 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 COPAP53621 1224 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 TBX4P57082 545 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 IRX4P78413 519 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 RPL6Q02878 288 aaKnown RBP16.6■□□□□ 0.25
LMX1B-204ENST00000561065 PTK2Q05397 1052 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 RING1Q06587 406 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 PDCLQ13371 301 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 NUMA1Q14980 2115 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 EIF4HQ15056 248 aaKnown RBP16.6■□□□□ 0.25
LMX1B-204ENST00000561065 HSP90AA4PQ58FG1 418 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 TCP11X2Q5H9J9 407 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 MIIPQ5JXC2 388 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 FKBP15Q5T1M5 1219 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 PIK3R6Q5UE93 754 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 SYPL2Q5VXT5 272 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 SDE2Q6IQ49 451 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 KIAA1324Q6UXG2 1013 aaKnown RBP16.6■□□□□ 0.25
LMX1B-204ENST00000561065 KIAA0907Q7Z7F0 614 aaPredicted RBP16.6■□□□□ 0.25
LMX1B-204ENST00000561065 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.6■□□□□ 0.25
LMX1B-204ENST00000561065 FAM149B1Q96BN6 582 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 SLC39A13Q96H72 371 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 FSCN3Q9NQT6 498 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 ABCB8Q9NUT2 735 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 EVLQ9UI08 416 aaPredicted RBP16.6■□□□□ 0.25
LMX1B-204ENST00000561065 XPO7Q9UIA9 1087 aaKnown RBP16.6■□□□□ 0.25
LMX1B-204ENST00000561065 PILRBQ9UKJ0 227 aa16.6■□□□□ 0.25
LMX1B-204ENST00000561065 C4orf47A7E2U8 309 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 KHNYNO15037 678 aaKnown RBP16.59■□□□□ 0.25
LMX1B-204ENST00000561065 ACSL4O60488 711 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 IGLV3-25P01717 112 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 HLA-EP13747 358 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 KCNA4P22459 653 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 CD70P32970 193 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 ZNF445P59923 1031 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 BYSLQ13895 437 aaKnown RBP16.59■□□□□ 0.25
LMX1B-204ENST00000561065 TRIM61Q5EBN2 209 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 SPDYCQ5MJ68 293 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 NUGGCQ68CJ6 796 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 TMEM110Q86TL2 294 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 ADIPOR2Q86V24 386 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 CACUL1Q86Y37 369 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 SYT12Q8IV01 421 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 PASD1Q8IV76 773 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 WDTC1Q8N5D0 677 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 ZNF366Q8N895 744 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 STK32AQ8WU08 396 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 CYB5D2Q8WUJ1 264 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 LMLNQ96KR4 655 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 NOX5Q96PH1 765 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 NUCKS1Q9H1E3 243 aaKnown RBP16.59■□□□□ 0.25
LMX1B-204ENST00000561065 USP36Q9P275 1121 aaKnown RBP16.59■□□□□ 0.25
LMX1B-204ENST00000561065 GGA2Q9UJY4 613 aa16.59■□□□□ 0.25
LMX1B-204ENST00000561065 CACNA1EQ15878 2313 aa16.58■□□□□ 0.24
LMX1B-204ENST00000561065 NPC1O15118 1278 aa16.58■□□□□ 0.24
LMX1B-204ENST00000561065 IRAK2O43187 625 aa16.58■□□□□ 0.24
LMX1B-204ENST00000561065 AP5Z1O43299 807 aa16.58■□□□□ 0.24
LMX1B-204ENST00000561065 TBL1XO60907 577 aa16.58■□□□□ 0.24
LMX1B-204ENST00000561065 ZNF217O75362 1048 aa16.58■□□□□ 0.24
LMX1B-204ENST00000561065 PABPC1P11940 636 aaKnown RBP16.58■□□□□ 0.24
LMX1B-204ENST00000561065 NNTQ13423 1086 aa16.58■□□□□ 0.24
LMX1B-204ENST00000561065 STARD3Q14849 445 aa16.58■□□□□ 0.24
LMX1B-204ENST00000561065 TAF5Q15542 800 aa16.58■□□□□ 0.24
LMX1B-204ENST00000561065 PTPRNQ16849 979 aa16.58■□□□□ 0.24
LMX1B-204ENST00000561065 SLC36A4Q6YBV0 504 aa16.58■□□□□ 0.24
LMX1B-204ENST00000561065 CHST9Q7L1S5 443 aa16.58■□□□□ 0.24
LMX1B-204ENST00000561065 UCMAQ8WVF2 138 aa16.58■□□□□ 0.24
LMX1B-204ENST00000561065 TMA16Q96EY4 203 aaKnown RBP16.58■□□□□ 0.24
LMX1B-204ENST00000561065 HSPA12BQ96MM6 686 aa16.58■□□□□ 0.24
LMX1B-204ENST00000561065 SERPINB11Q96P15 392 aa16.58■□□□□ 0.24
LMX1B-204ENST00000561065 CPXM1Q96SM3 734 aa16.58■□□□□ 0.24
LMX1B-204ENST00000561065 LSM14BQ9BX40 385 aaKnown RBP16.58■□□□□ 0.24
LMX1B-204ENST00000561065 TLR6Q9Y2C9 796 aa16.58■□□□□ 0.24
LMX1B-204ENST00000561065 DAAM1Q9Y4D1 1078 aa16.58■□□□□ 0.24
LMX1B-204ENST00000561065 CEP83Q9Y592 693 aa16.58■□□□□ 0.24
LMX1B-204ENST00000561065 SMTNL1A8MU46 457 aa16.57■□□□□ 0.24
LMX1B-204ENST00000561065 KRT9P35527 623 aa16.57■□□□□ 0.24
LMX1B-204ENST00000561065 RPS24P62847 133 aaKnown RBP16.57■□□□□ 0.24
LMX1B-204ENST00000561065 MYL5Q02045 173 aa16.57■□□□□ 0.24
LMX1B-204ENST00000561065 ZNF33AQ06730 810 aa16.57■□□□□ 0.24
LMX1B-204ENST00000561065 EIF4EBP2Q13542 120 aaPredicted RBP16.57■□□□□ 0.24
LMX1B-204ENST00000561065 E2F5Q15329 346 aa16.57■□□□□ 0.24
LMX1B-204ENST00000561065 SERPINA13PQ6UXR4 307 aa16.57■□□□□ 0.24
LMX1B-204ENST00000561065 BEND5Q7L4P6 421 aa16.57■□□□□ 0.24
LMX1B-204ENST00000561065 UNC45BQ8IWX7 931 aa16.57■□□□□ 0.24
LMX1B-204ENST00000561065 WFIKKN2Q8TEU8 576 aa16.57■□□□□ 0.24
LMX1B-204ENST00000561065 TMEM245Q9H330 911 aa16.57■□□□□ 0.24
LMX1B-204ENST00000561065 PRDM16Q9HAZ2 1276 aa16.57■□□□□ 0.24
LMX1B-204ENST00000561065 SAMSN1Q9NSI8 373 aaKnown RBP16.57■□□□□ 0.24
LMX1B-204ENST00000561065 TPRP12270 2363 aaKnown RBP16.57■□□□□ 0.24
LMX1B-204ENST00000561065 CHD8Q9HCK8 2581 aa16.56■□□□□ 0.24
LMX1B-204ENST00000561065 ACACBO00763 2458 aa16.56■□□□□ 0.24
LMX1B-204ENST00000561065 MOCS2O96007 188 aaPredicted RBP16.56■□□□□ 0.24
LMX1B-204ENST00000561065 EPHX1P07099 455 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms