RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 FAM170AA1A519 330 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 EIF3CLB5ME19 914 aaKnown RBP9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 I6L893 689 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 NCAM2O15394 837 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 ATMINO43313 823 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 PDGFBP01127 241 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 CYBBP04839 570 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 TMEM253P0C7T8 217 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 CHRNB1P11230 501 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 TYRP14679 529 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 ABCB4P21439 1286 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 DRD1P21728 446 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 SLC6A4P31645 630 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 ADRA1BP35368 520 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 MAGEA9P43362 315 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 RPS9P46781 194 aaKnown RBP9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 SOX9P48436 509 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 MRE11P49959 708 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 GALK1P51570 392 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 AIF1P55008 147 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 HDAC4P56524 1084 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 GSDMDP57764 484 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 OGDHQ02218 1023 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 NRG1Q02297 640 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 ZNF252P-AS1Q0IIN9 211 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 NME3Q13232 169 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 CCINQ13939 588 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 C15orf59Q2T9L4 293 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 PREPLQ4J6C6 727 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 MS4A13Q5J8X5 152 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 DGKKQ5KSL6 1271 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 ARTNQ5T4W7 220 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 ASTLQ6HA08 431 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 MAMSTRQ6ZN01 415 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 PHTF2Q8N3S3 785 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 SYNPOQ8N3V7 929 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 CD101Q93033 1021 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 NTAN1Q96AB6 310 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 TMA16Q96EY4 203 aaKnown RBP9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 P2RY11Q96G91 374 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 XPO6Q96QU8 1125 aaKnown RBP9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 EIF3CQ99613 913 aaKnown RBP9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 P2RY13Q9BPV8 354 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 BBS2Q9BXC9 721 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 ANLNQ9NQW6 1124 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 DLGAP2Q9P1A6 1054 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 UVRAGQ9P2Y5 699 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 XPO7Q9UIA9 1087 aaKnown RBP9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 SLC27A6Q9Y2P4 619 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 SIT1Q9Y3P8 196 aa9.98□□□□□ -0.81
RABGGTA-221ENST00000561055 MUC22E2RYF6 1773 aaPredicted RBP9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 GOLGA6L7A0A1B0GV03 622 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 FAM170BA6NMN3 283 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 GOLGA6L6A8MZA4 724 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 CCP110O43303 1012 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 TULP3O75386 442 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 PAGE1O75459 146 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 MTA2O94776 668 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 CISD3P0C7P0 127 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 DESP17661 470 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 TACR2P21452 398 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 CD72P21854 359 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 TARSP26639 723 aaKnown RBP9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 HOXD9P28356 352 aaPredicted RBP9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 CYLC1P35663 651 aaPredicted RBP9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 SLC6A11P48066 632 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 NUBP1P53384 320 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 ATP11AP98196 1134 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 SCAPQ12770 1279 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 PIGHQ14442 188 aaPredicted RBP9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 PON2Q15165 354 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 ANO4Q32M45 955 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 FBXO43Q4G163 708 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 TMEM31Q5JXX7 168 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 SH3PXD2AQ5TCZ1 1133 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 TTC39BQ5VTQ0 682 aaPredicted RBP9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 FSTL4Q6MZW2 842 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 TPGS1Q6ZTW0 290 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 KIAA0907Q7Z7F0 614 aaPredicted RBP9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 CCDC105Q8IYK2 499 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 ZNF683Q8IZ20 524 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 NIPA2Q8N8Q9 360 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 ZNF557Q8N988 423 aaPredicted RBP9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 TTC8Q8TAM2 541 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 FAM172AQ8WUF8 416 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 CTNNBL1Q8WYA6 563 aaPredicted RBP9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 RNF34Q969K3 372 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 ARHGEF26Q96DR7 871 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 PNKPQ96T60 521 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 IER2Q9BTL4 223 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 TRIM7Q9C029 511 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 TKTL2Q9H0I9 626 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 OSBPL2Q9H1P3 480 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 MFSD1Q9H3U5 465 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 RETREG1Q9H6L5 497 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 FBRSL1Q9HCM7 1045 aaKnown RBP9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 SPTLC3Q9NUV7 552 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 DEC1Q9P2X7 70 aa9.97□□□□□ -0.81
RABGGTA-221ENST00000561055 LCMT1Q9UIC8 334 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms