RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 C7orf25Q9BPX7 421 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 BHMT2Q9H2M3 363 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 C11orf21Q9P2W6 132 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 SLC23A1Q9UHI7 598 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 MAN1B1Q9UKM7 699 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 PCDHA6Q9UN73 950 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 NR2E3Q9Y5X4 410 aa4.81□□□□□ -1.64
TMOD3-207ENST00000560549 MAST2Q6P0Q8 1798 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 BAZ2AQ9UIF9 1905 aaKnown RBP4.8□□□□□ -1.64
TMOD3-207ENST00000560549 MYH13Q9UKX3 1938 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 YDJCA8MPS7 323 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 KLRF2D3W0D1 207 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 TNRC18O15417 2968 aaPredicted RBP4.8□□□□□ -1.64
TMOD3-207ENST00000560549 POLR2DO15514 142 aaKnown RBP4.8□□□□□ -1.64
TMOD3-207ENST00000560549 SGTAO43765 313 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 EDIL3O43854 480 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 ENDOD1O94919 500 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 AGR2O95994 175 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 HSD3B1P14060 373 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 TNFAIP3P21580 790 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 PROZP22891 400 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 ALDH1B1P30837 517 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 SHMT1P34896 483 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 RXRGP48443 463 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 CHN2P52757 468 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 CDC42EP1Q00587 391 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 FSTL1Q12841 308 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 TBX2Q13207 712 aaPredicted RBP4.8□□□□□ -1.64
TMOD3-207ENST00000560549 NOGQ13253 232 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 MTM1Q13496 603 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 BEAN1Q3B7T3 259 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 CFAP161Q6P656 301 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 NPNTQ6UXI9 565 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 KRT77Q7Z794 578 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 BLIDQ8IZY5 108 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 PQLC1Q8N2U9 271 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 ACRBPQ8NEB7 543 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 PROKR1Q8TCW9 393 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 LRRC15Q8TF66 581 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 RGMAQ96B86 450 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 NAP1L5Q96NT1 182 aaPredicted RBP4.8□□□□□ -1.64
TMOD3-207ENST00000560549 BPIFA3Q9BQP9 254 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 SLC46A2Q9BY10 475 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 TRIM5Q9C035 493 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 DNAJC18Q9H819 358 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 ATP6V0A4Q9HBG4 840 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 L1RE1Q9UN81 338 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 RABGAP1Q9Y3P9 1069 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 DMRT1Q9Y5R6 373 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 COL4A3Q01955 1670 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 SBF1O95248 1867 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 CCDC88AQ3V6T2 1871 aa4.8□□□□□ -1.64
TMOD3-207ENST00000560549 MYH15Q9Y2K3 1946 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 LRRC37AA6NMS7 1700 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 FER1L6Q2WGJ9 1857 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 A0A1B0GVC2 190 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 DDTLA6NHG4 134 aaPredicted RBP4.79□□□□□ -1.64
TMOD3-207ENST00000560549 DRGXA6NNA5 263 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 MARCH11A6NNE9 402 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 NT5C1B-RDH14C9J2C7 533 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 FAM227AF5H4B4 570 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 hCG_1984214I3L0E3 225 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 ECE2O60344 883 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 PRSS23O95084 383 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 CAVIN2O95810 425 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 FTLP02792 175 aaPredicted RBP4.79□□□□□ -1.64
TMOD3-207ENST00000560549 ELANEP08246 267 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 TOP1P11387 765 aaKnown RBP4.79□□□□□ -1.64
TMOD3-207ENST00000560549 ATP1A3P13637 1013 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 MSNP26038 577 aaKnown RBP4.79□□□□□ -1.64
TMOD3-207ENST00000560549 KIF5BP33176 963 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 HK3P52790 923 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 NKX6-1P78426 367 aaPredicted RBP4.79□□□□□ -1.64
TMOD3-207ENST00000560549 TLE1Q04724 770 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 CCDC96Q2M329 555 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 PDXDC1Q6P996 788 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 HEATR3Q7Z4Q2 680 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.79□□□□□ -1.64
TMOD3-207ENST00000560549 MYLK4Q86YV6 388 aaPredicted RBP4.79□□□□□ -1.64
TMOD3-207ENST00000560549 CEP57L1Q8IYX8 460 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 CNNM3Q8NE01 707 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 DEPTORQ8TB45 409 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 KIAA1524Q8TCG1 905 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 CCHCR1Q8TD31 782 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 STAMQ92783 540 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 DHX58Q96C10 678 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 PAGE5Q96GU1 130 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 CCDC138Q96M89 665 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 PIGSQ96S52 555 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 TTPALQ9BTX7 342 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 WDR12Q9GZL7 423 aaKnown RBP4.79□□□□□ -1.64
TMOD3-207ENST00000560549 OSBPL5Q9H0X9 879 aaPredicted RBP4.79□□□□□ -1.64
TMOD3-207ENST00000560549 VAT1LQ9HCJ6 419 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 AKIP1Q9NQ31 210 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 SH3GLB2Q9NR46 395 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 TDP1Q9NUW8 608 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 BARHL2Q9NY43 387 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 MTMR4Q9NYA4 1195 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 IFNKQ9P0W0 207 aa4.79□□□□□ -1.64
TMOD3-207ENST00000560549 CLIP2Q9UDT6 1046 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms