RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 ZMYM5Q9UJ78 669 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 NUDT5Q9UKK9 219 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 RAB21Q9UL25 225 aa8.91□□□□□ -0.98
TRAF3-209ENST00000560463 UTP11Q9Y3A2 253 aaKnown RBP8.91□□□□□ -0.98
TRAF3-209ENST00000560463 PRRC2BQ5JSZ5 2229 aaKnown RBP8.9□□□□□ -0.98
TRAF3-209ENST00000560463 SLC12A8A0AV02 714 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 CCDC151A5D8V7 595 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 CFAP69A5D8W1 941 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 BHMG1C9JSJ3 638 aaPredicted RBP8.9□□□□□ -0.98
TRAF3-209ENST00000560463 NDC80O14777 642 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 MCF2LO15068 1137 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 NCAM2O15394 837 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 TTI1O43156 1089 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 DAPK3O43293 454 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 MSI1O43347 362 aaKnown RBP8.9□□□□□ -0.98
TRAF3-209ENST00000560463 CREB3O43889 395 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 XYLBO75191 536 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 PAGE1O75459 146 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 ERLIN1O75477 346 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 HEXIM1O94992 359 aaKnown RBP8.9□□□□□ -0.98
TRAF3-209ENST00000560463 PAPLNO95428 1278 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 ECEL1O95672 775 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 DDX6P26196 483 aaKnown RBP eCLIP8.9□□□□□ -0.98
TRAF3-209ENST00000560463 HOXC13P31276 330 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 STIP1P31948 543 aaKnown RBP8.9□□□□□ -0.98
TRAF3-209ENST00000560463 SERPINB6P35237 376 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 IRS1P35568 1242 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 PTGIRP43119 386 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 RGS19P49795 217 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 EPHA5P54756 1037 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 VCPP55072 806 aaKnown RBP8.9□□□□□ -0.98
TRAF3-209ENST00000560463 MLLT6P55198 1093 aaPredicted RBP8.9□□□□□ -0.98
TRAF3-209ENST00000560463 DYNLT1P63172 113 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 SMAD3P84022 425 aaKnown RBP8.9□□□□□ -0.98
TRAF3-209ENST00000560463 DPYSQ14117 519 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 NAA30Q147X3 362 aaPredicted RBP8.9□□□□□ -0.98
TRAF3-209ENST00000560463 BRD3Q15059 726 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 PAFAH1B3Q15102 231 aaKnown RBP8.9□□□□□ -0.98
TRAF3-209ENST00000560463 NOMO1Q15155 1222 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 LLGL1Q15334 1064 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 OASLQ15646 514 aaKnown RBP8.9□□□□□ -0.98
TRAF3-209ENST00000560463 TTC27Q6P3X3 843 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 RFX8Q6ZV50 586 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 SPRED2Q7Z698 418 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 TMC8Q8IU68 726 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 LZTR1Q8N653 840 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 PQLC3Q8N755 202 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 PLD5Q8N7P1 536 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 SLC35B2Q8TB61 432 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 ACTL9Q8TC94 416 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 CCHCR1Q8TD31 782 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 SEC14L1Q92503 715 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 MRPS31Q92665 395 aaKnown RBP8.9□□□□□ -0.98
TRAF3-209ENST00000560463 HAUS1Q96CS2 278 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 ERP44Q9BS26 406 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 LRRC3Q9BY71 257 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 FAM129AQ9BZQ8 928 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 CATSPERBQ9H7T0 1116 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 IL21Q9HBE4 155 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 ZNF334Q9HCZ1 680 aaPredicted RBP8.9□□□□□ -0.98
TRAF3-209ENST00000560463 GDF3Q9NR23 364 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 ASAH2Q9NR71 780 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 ARHGEF4Q9NR80 690 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 FAM114A2Q9NRY5 505 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 PPARGC1AQ9UBK2 798 aaKnown RBP8.9□□□□□ -0.98
TRAF3-209ENST00000560463 DMGDHQ9UI17 866 aaKnown RBP8.9□□□□□ -0.98
TRAF3-209ENST00000560463 ZNF148Q9UQR1 794 aa8.9□□□□□ -0.98
TRAF3-209ENST00000560463 R3HDM2Q9Y2K5 976 aaKnown RBP8.9□□□□□ -0.98
TRAF3-209ENST00000560463 HACD1B0YJ81 288 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 I6L893 689 aaPredicted RBP8.89□□□□□ -0.99
TRAF3-209ENST00000560463 DCLK1O15075 740 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 COCHO43405 550 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 LRIG2O94898 1065 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 LATS1O95835 1130 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 OLFM2O95897 454 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 TBX18O95935 607 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 RBP3P10745 1247 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 EPCAMP16422 314 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 AMPD1P23109 780 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 GABRR2P28476 465 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 HARS2P49590 506 aaKnown RBP8.89□□□□□ -0.99
TRAF3-209ENST00000560463 EIF3EP60228 445 aaKnown RBP8.89□□□□□ -0.99
TRAF3-209ENST00000560463 GUCY2DQ02846 1103 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 SNX1Q13596 522 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 CUL1Q13616 776 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 PTK6Q13882 451 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 PPP1R7Q15435 360 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 DUSP6Q16828 381 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 MAP9Q49MG5 647 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 MANEALQ5VSG8 457 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 NCBP2-AS2Q69YL0 99 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 TMCO3Q6UWJ1 677 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 LRRC31Q6UY01 552 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 C4orf22Q6V702 233 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 TMEM150AQ86TG1 271 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 MIB1Q86YT6 1006 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 JAMLQ86YT9 394 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 ALLCQ8N6M5 410 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 CCDC89Q8N998 374 aa8.89□□□□□ -0.99
TRAF3-209ENST00000560463 HNRNPLLQ8WVV9 542 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms