RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 DDX50Q9BQ39 737 aaKnown RBP13.08□□□□□ -0.32
LRRC28-214ENST00000559433 STK33Q9BYT3 514 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 CIPCQ9C0C6 399 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 DUSP15Q9H1R2 295 aaPredicted RBP13.08□□□□□ -0.32
LRRC28-214ENST00000559433 GANQ9H2C0 597 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 FAM204AQ9H8W3 233 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 FAM207AQ9NSI2 230 aaPredicted RBP13.08□□□□□ -0.32
LRRC28-214ENST00000559433 ASNSD1Q9NWL6 643 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 LIMA1Q9UHB6 759 aaKnown RBP13.08□□□□□ -0.32
LRRC28-214ENST00000559433 RAD54BQ9Y620 910 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.08□□□□□ -0.32
LRRC28-214ENST00000559433 CKAP5Q14008 2032 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 TNRC6BQ9UPQ9 1833 aaKnown RBP13.07□□□□□ -0.32
LRRC28-214ENST00000559433 A0A1W2PQF6 199 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 TYW5A2RUC4 315 aaKnown RBP13.07□□□□□ -0.32
LRRC28-214ENST00000559433 NPC1O15118 1278 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 IRAK2O43187 625 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 TIMM44O43615 452 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 TBL1XO60907 577 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 GRAP2O75791 330 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 GLI1P08151 1106 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 ZNF806P0C7X5 589 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 GABRG2P18507 467 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 CDK11BP21127 795 aaKnown RBP13.07□□□□□ -0.32
LRRC28-214ENST00000559433 BCKDHBP21953 392 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 DHPSP49366 369 aaPredicted RBP13.07□□□□□ -0.32
LRRC28-214ENST00000559433 POLR2FP61218 127 aaKnown RBP13.07□□□□□ -0.32
LRRC28-214ENST00000559433 CDK17Q00537 523 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 STARD3Q14849 445 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 EIF4HQ15056 248 aaKnown RBP13.07□□□□□ -0.32
LRRC28-214ENST00000559433 CCDC6Q16204 474 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 PTPN20Q4JDL3 420 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 ZC3H12AQ5D1E8 599 aaKnown RBP13.07□□□□□ -0.32
LRRC28-214ENST00000559433 EFHC1Q5JVL4 640 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 PIK3R6Q5UE93 754 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 NADSYN1Q6IA69 706 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 KIAA1211LQ6NV74 962 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 CAVIN1Q6NZI2 390 aaKnown RBP13.07□□□□□ -0.32
LRRC28-214ENST00000559433 OLFML1Q6UWY5 402 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 NOP9Q86U38 636 aaKnown RBP13.07□□□□□ -0.32
LRRC28-214ENST00000559433 DEFB106AQ8N104 65 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 AOPEPQ8N6M6 819 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 HJURPQ8NCD3 748 aaPredicted RBP13.07□□□□□ -0.32
LRRC28-214ENST00000559433 TMEM35BQ8NCS4 154 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 OLIG1Q8TAK6 271 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 NETO1Q8TDF5 533 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 RLN3Q8WXF3 142 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 SLC39A13Q96H72 371 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 PCMTD1Q96MG8 357 aaPredicted RBP13.07□□□□□ -0.32
LRRC28-214ENST00000559433 PRICKLE1Q96MT3 831 aaPredicted RBP13.07□□□□□ -0.32
LRRC28-214ENST00000559433 SLC2A13Q96QE2 648 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 RTKNQ9BST9 563 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 IRX2Q9BZI1 471 aaPredicted RBP13.07□□□□□ -0.32
LRRC28-214ENST00000559433 NAT10Q9H0A0 1025 aaKnown RBP13.07□□□□□ -0.32
LRRC28-214ENST00000559433 VPS45Q9NRW7 570 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 ABCB8Q9NUT2 735 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 ELOVL2Q9NXB9 296 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 STON1Q9Y6Q2 735 aa13.07□□□□□ -0.32
LRRC28-214ENST00000559433 SYNJ2BP-COX16A0A087WUM0 186 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 FAM170AA1A519 330 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 LGALS16A8MUM7 142 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 WASH3PC4AMC7 463 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 EPHB6O15197 1021 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 SYNCRIPO60506 623 aaKnown RBP13.06□□□□□ -0.32
LRRC28-214ENST00000559433 DAB1O75553 588 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 LSM8O95777 96 aaKnown RBP13.06□□□□□ -0.32
LRRC28-214ENST00000559433 CAVIN2O95810 425 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 IGLV3-25P01717 112 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 ZNF18P17022 549 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 NDUFV2P19404 249 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 HLA-FP30511 346 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 CDH5P33151 784 aaPredicted RBP13.06□□□□□ -0.32
LRRC28-214ENST00000559433 MPLP40238 635 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 P2RY2P41231 377 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 ATXN1P54253 815 aaKnown RBP13.06□□□□□ -0.32
LRRC28-214ENST00000559433 PITX1P78337 314 aaPredicted RBP13.06□□□□□ -0.32
LRRC28-214ENST00000559433 SLC6A3Q01959 620 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 SYCP1Q15431 976 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 ANO6Q4KMQ2 910 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 MPP7Q5T2T1 576 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 PMS2CLQ68D20 193 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 TMEM215Q68D42 235 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 IL31Q6EBC2 164 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 WFIKKN2Q8TEU8 576 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 SORCS1Q8WY21 1168 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 RNF34Q969K3 372 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 NUCKS1Q9H1E3 243 aaKnown RBP13.06□□□□□ -0.32
LRRC28-214ENST00000559433 NLRC4Q9NPP4 1024 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 DDIT4Q9NX09 232 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 DLL3Q9NYJ7 618 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 COX16Q9P0S2 106 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 CALCOCO1Q9P1Z2 691 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 STIM2Q9P246 746 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 THAP10Q9P2Z0 257 aaPredicted RBP13.06□□□□□ -0.32
LRRC28-214ENST00000559433 SLC12A6Q9UHW9 1150 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 XPO7Q9UIA9 1087 aaKnown RBP13.06□□□□□ -0.32
LRRC28-214ENST00000559433 GGA2Q9UJY4 613 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 PLA2G4CQ9UP65 541 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 SIK3Q9Y2K2 1263 aa13.06□□□□□ -0.32
LRRC28-214ENST00000559433 DCHS1Q96JQ0 3298 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms