RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 SH3PXD2AQ5TCZ1 1133 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 MFSD7Q6UXD7 560 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 CYP4V2Q6ZWL3 525 aaPredicted RBP17.16■□□□□ 0.34
TPM1-219ENST00000559397 CMTM8Q8IZV2 173 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 ADAM32Q8TC27 787 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 SEC14L1Q92503 715 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 RNF25Q96BH1 459 aaPredicted RBP17.16■□□□□ 0.34
TPM1-219ENST00000559397 ZFRQ96KR1 1074 aaKnown RBP17.16■□□□□ 0.34
TPM1-219ENST00000559397 RUNDC3BQ96NL0 473 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 MARCH2Q9P0N8 246 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 RASAL2Q9UJF2 1139 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 EFR3BQ9Y2G0 817 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 NUP210Q8TEM1 1887 aaPredicted RBP17.15■□□□□ 0.34
TPM1-219ENST00000559397 FAM187AA6NFU0 413 aa17.15■□□□□ 0.34
TPM1-219ENST00000559397 M0QYT0 321 aa17.15■□□□□ 0.34
TPM1-219ENST00000559397 SEC31AO94979 1220 aaKnown RBP17.15■□□□□ 0.34
TPM1-219ENST00000559397 MYBL2P10244 700 aa17.15■□□□□ 0.34
TPM1-219ENST00000559397 WEE1P30291 646 aa17.15■□□□□ 0.34
TPM1-219ENST00000559397 CDKN2BP42772 138 aa17.15■□□□□ 0.34
TPM1-219ENST00000559397 FNTAP49354 379 aa17.15■□□□□ 0.34
TPM1-219ENST00000559397 ZXDBP98169 803 aa17.15■□□□□ 0.34
TPM1-219ENST00000559397 ATP11AP98196 1134 aa17.15■□□□□ 0.34
TPM1-219ENST00000559397 GUCY2DQ02846 1103 aa17.15■□□□□ 0.34
TPM1-219ENST00000559397 RAB6CQ53S08 254 aa17.15■□□□□ 0.34
TPM1-219ENST00000559397 TTC27Q6P3X3 843 aa17.15■□□□□ 0.34
TPM1-219ENST00000559397 SPOCD1Q6ZMY3 1216 aa17.15■□□□□ 0.34
TPM1-219ENST00000559397 CCDC50Q8IVM0 306 aa17.15■□□□□ 0.34
TPM1-219ENST00000559397 EIF1ADQ8N9N8 165 aaKnown RBP17.15■□□□□ 0.34
TPM1-219ENST00000559397 MYADMQ96S97 322 aa17.15■□□□□ 0.34
TPM1-219ENST00000559397 KLF16Q9BXK1 252 aaPredicted RBP17.15■□□□□ 0.34
TPM1-219ENST00000559397 RAB6CQ9H0N0 254 aa17.15■□□□□ 0.34
TPM1-219ENST00000559397 EPB41L5Q9HCM4 733 aa17.15■□□□□ 0.34
TPM1-219ENST00000559397 PRDM6Q9NQX0 595 aa17.15■□□□□ 0.34
TPM1-219ENST00000559397 KLHL11Q9NVR0 708 aa17.15■□□□□ 0.34
TPM1-219ENST00000559397 GDE1Q9NZC3 331 aa17.15■□□□□ 0.34
TPM1-219ENST00000559397 CDH7Q9ULB5 785 aa17.15■□□□□ 0.34
TPM1-219ENST00000559397 USP18Q9UMW8 372 aa17.15■□□□□ 0.34
TPM1-219ENST00000559397 HELZP42694 1942 aaKnown RBP17.15■□□□□ 0.34
TPM1-219ENST00000559397 PI4K2BG5E9Z4 385 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 TTI1O43156 1089 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 IRAK2O43187 625 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 MSI1O43347 362 aaKnown RBP17.14■□□□□ 0.33
TPM1-219ENST00000559397 ATP8B1O43520 1251 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 CKMP06732 381 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 MBL2P11226 248 aaPredicted RBP17.14■□□□□ 0.33
TPM1-219ENST00000559397 COILP38432 576 aaPredicted RBP17.14■□□□□ 0.33
TPM1-219ENST00000559397 ATXN1P54253 815 aaKnown RBP17.14■□□□□ 0.33
TPM1-219ENST00000559397 HDAC4P56524 1084 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 NNTQ13423 1086 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 CDO1Q16878 200 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 MAP9Q49MG5 647 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 STRADAQ7RTN6 431 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 MIB1Q86YT6 1006 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 FAM172AQ8WUF8 416 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 SERPINB11Q96P15 392 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 PEBP4Q96S96 227 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 HINFPQ9BQA5 517 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 NACA2Q9H009 215 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 FAM204AQ9H8W3 233 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 ZWILCHQ9H900 591 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 HOMER3Q9NSC5 361 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 DDIT4Q9NX09 232 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.14■□□□□ 0.33
TPM1-219ENST00000559397 ARHGAP26Q9UNA1 814 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 CPQQ9Y646 472 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 UNC80Q8N2C7 3258 aa17.14■□□□□ 0.33
TPM1-219ENST00000559397 hCG_1818297A0A087WSY0 165 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 ZSCAN5CA6NGD5 496 aaPredicted RBP17.13■□□□□ 0.33
TPM1-219ENST00000559397 DR1Q01658 176 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 LLGL1Q15334 1064 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 TFDP3Q5H9I0 405 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 ZSCAN18Q8TBC5 510 aaPredicted RBP17.13■□□□□ 0.33
TPM1-219ENST00000559397 ADAMTS19Q8TE59 1207 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 AENQ8WTP8 325 aaKnown RBP17.13■□□□□ 0.33
TPM1-219ENST00000559397 CASKIN2Q8WXE0 1202 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 SLCO2A1Q92959 643 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 SLC39A13Q96H72 371 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 HEMGNQ9BXL5 484 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 DCLK3Q9C098 648 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 SMG9Q9H0W8 520 aaKnown RBP17.13■□□□□ 0.33
TPM1-219ENST00000559397 GKN1Q9NS71 199 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 PIGVQ9NUD9 493 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 PCSK1NQ9UHG2 260 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 HBS1LQ9Y450 684 aaKnown RBP17.13■□□□□ 0.33
TPM1-219ENST00000559397 SYNJ2BP-COX16A0A087WUM0 186 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 SLC12A8A0AV02 714 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 LRRD1A4D1F6 860 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 PRAMEF12O95522 483 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 F9P00740 461 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 IGLV3-27P01718 113 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 KDELR1P24390 212 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 GBP1P32455 592 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 RDXP35241 583 aaKnown RBP17.13■□□□□ 0.33
TPM1-219ENST00000559397 AVPR1AP37288 418 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 CARSP49589 748 aaKnown RBP17.13■□□□□ 0.33
TPM1-219ENST00000559397 ARSEP51690 589 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 TFF2Q03403 129 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 DEUP1Q05D60 604 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 NME3Q13232 169 aa17.13■□□□□ 0.33
TPM1-219ENST00000559397 TRIP4Q15650 581 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms