RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 DCAF6Q58WW2 860 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 EFHC1Q5JVL4 640 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 MPP7Q5T2T1 576 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 PIK3R6Q5UE93 754 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 TAF3Q5VWG9 929 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 PMS2CLQ68D20 193 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 TMEM215Q68D42 235 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 KIAA1211LQ6NV74 962 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 SLC26A9Q7LBE3 791 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.37□□□□□ -0.59
SPG11-216ENST00000559347 HJURPQ8NCD3 748 aaPredicted RBP11.37□□□□□ -0.59
SPG11-216ENST00000559347 TMEM35BQ8NCS4 154 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 ANKRD20A12PQ8NF67 263 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 TMA16Q96EY4 203 aaKnown RBP11.37□□□□□ -0.59
SPG11-216ENST00000559347 MYEOVQ96EZ4 313 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 LOXL4Q96JB6 756 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 BPIFA3Q9BQP9 254 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 NUCKS1Q9H1E3 243 aaKnown RBP11.37□□□□□ -0.59
SPG11-216ENST00000559347 SEMA4GQ9NTN9 838 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 BCCIPQ9P287 314 aaKnown RBP eCLIP11.37□□□□□ -0.59
SPG11-216ENST00000559347 THAP10Q9P2Z0 257 aaPredicted RBP11.37□□□□□ -0.59
SPG11-216ENST00000559347 NOCTQ9UK39 431 aaKnown RBP11.37□□□□□ -0.59
SPG11-216ENST00000559347 INVSQ9Y283 1065 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 DAAM1Q9Y4D1 1078 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 RAD54BQ9Y620 910 aa11.37□□□□□ -0.59
SPG11-216ENST00000559347 SDK1Q7Z5N4 2213 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 GOLGA6L7A0A1B0GV03 622 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 NPC1O15118 1278 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 TBL1XO60907 577 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 GRAP2O75791 330 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 GFPT2O94808 682 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 LSM8O95777 96 aaKnown RBP11.36□□□□□ -0.59
SPG11-216ENST00000559347 APOEP02649 317 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 MMEP08473 750 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 ATP1A3P13637 1013 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 NDUFV2P19404 249 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 GBP1P32455 592 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 IL12RB1P42701 662 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 POLR2FP61218 127 aaKnown RBP11.36□□□□□ -0.59
SPG11-216ENST00000559347 NOMO3P69849 1222 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 SLC6A3Q01959 620 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 LMNB2Q03252 620 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 SYCP1Q15431 976 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 OTUD1Q5VV17 481 aaPredicted RBP11.36□□□□□ -0.59
SPG11-216ENST00000559347 OR6B2Q6IFH4 312 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 PRR23CQ6ZRP0 262 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 KIAA0907Q7Z7F0 614 aaPredicted RBP11.36□□□□□ -0.59
SPG11-216ENST00000559347 C11orf74Q86VG3 221 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 ZDHHC17Q8IUH5 632 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 DEFB106AQ8N104 65 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 ZNF397Q8NF99 534 aaPredicted RBP11.36□□□□□ -0.59
SPG11-216ENST00000559347 WFIKKN2Q8TEU8 576 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 UCMAQ8WVF2 138 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 RLN3Q8WXF3 142 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 RMDN1Q96DB5 314 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 SPACA7Q96KW9 195 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 ERGIC2Q96RQ1 377 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 CIPCQ9C0C6 399 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 PDCL3Q9H2J4 239 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 SYNCQ9H7C4 482 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 FAM204AQ9H8W3 233 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 NLRC4Q9NPP4 1024 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 ABCB8Q9NUT2 735 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 CALCOCO1Q9P1Z2 691 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 XPO7Q9UIA9 1087 aaKnown RBP11.36□□□□□ -0.59
SPG11-216ENST00000559347 GGA2Q9UJY4 613 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.36□□□□□ -0.59
SPG11-216ENST00000559347 STON1Q9Y6Q2 735 aa11.36□□□□□ -0.59
SPG11-216ENST00000559347 TP53BP1Q12888 1972 aaPredicted RBP11.36□□□□□ -0.59
SPG11-216ENST00000559347 FAM170AA1A519 330 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 TYW5A2RUC4 315 aaKnown RBP11.35□□□□□ -0.59
SPG11-216ENST00000559347 WASH3PC4AMC7 463 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 PABPC1P11940 636 aaKnown RBP11.35□□□□□ -0.59
SPG11-216ENST00000559347 SOX5P35711 763 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 SCNN1AP37088 669 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 MPLP40238 635 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 GABRB2P47870 512 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 ID4P47928 161 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 SNX16P57768 344 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 RPS24P62847 133 aaKnown RBP11.35□□□□□ -0.59
SPG11-216ENST00000559347 CDK17Q00537 523 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 ZNF234Q14588 700 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 CSRP2Q16527 193 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 MAP7D1Q3KQU3 841 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 FUT11Q495W5 492 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 ZC3H12AQ5D1E8 599 aaKnown RBP11.35□□□□□ -0.59
SPG11-216ENST00000559347 MS4A13Q5J8X5 152 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 PLA2G2CQ5R387 149 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 RAP1GAP2Q684P5 730 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 SDE2Q6IQ49 451 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 CHST9Q7L1S5 443 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 CHSY1Q86X52 802 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 ZNF677Q86XU0 584 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 XYLT1Q86Y38 959 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 MFN1Q8IWA4 741 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 DHX40Q8IX18 779 aaKnown RBP11.35□□□□□ -0.59
SPG11-216ENST00000559347 AHI1Q8N157 1196 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 PGBD3Q8N328 593 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 FRMD1Q8N878 549 aa11.35□□□□□ -0.59
SPG11-216ENST00000559347 SLC20A1Q8WUM9 679 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms