RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 MAML2Q8IZL2 1156 aaPredicted RBP11.87□□□□□ -0.51
SNX1-204ENST00000559061 NAT16Q8N8M0 369 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 MSANTD4Q8NCY6 345 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 ZNF653Q96CK0 615 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 MSANTD3Q96H12 275 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.87□□□□□ -0.51
SNX1-204ENST00000559061 C1QTNF1Q9BXJ1 281 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 DCLK3Q9C098 648 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 NHEJ1Q9H9Q4 299 aaPredicted RBP11.87□□□□□ -0.51
SNX1-204ENST00000559061 POLR3BQ9NW08 1133 aaPredicted RBP11.87□□□□□ -0.51
SNX1-204ENST00000559061 CNOT8Q9UFF9 292 aaKnown RBP11.87□□□□□ -0.51
SNX1-204ENST00000559061 ZNF510Q9Y2H8 683 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 HS3ST4Q9Y661 456 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 CHD5Q8TDI0 1954 aa11.87□□□□□ -0.51
SNX1-204ENST00000559061 A0A0A0MRY4 1105 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 TSPAN3O60637 253 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 PAGE1O75459 146 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 ADH1CP00326 375 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 CYP1A2P05177 515 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 TCF4P15884 667 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 PDGFRAP16234 1089 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 ABCB4P21439 1286 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 GPD1P21695 349 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 AVPR2P30518 371 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 RDXP35241 583 aaKnown RBP11.86□□□□□ -0.51
SNX1-204ENST00000559061 HARS2P49590 506 aaKnown RBP11.86□□□□□ -0.51
SNX1-204ENST00000559061 ZNF143P52747 638 aaPredicted RBP11.86□□□□□ -0.51
SNX1-204ENST00000559061 GALCP54803 685 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 RPS24P62847 133 aaKnown RBP11.86□□□□□ -0.51
SNX1-204ENST00000559061 GAD2Q05329 585 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 KDSRQ06136 332 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 CDO1Q16878 200 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 RAP1GAP2Q684P5 730 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 TMEM215Q68D42 235 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 CIR1Q86X95 450 aaPredicted RBP11.86□□□□□ -0.51
SNX1-204ENST00000559061 FAM131BQ86XD5 332 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 CCDC185Q8N715 623 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 CD101Q93033 1021 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 IGSF8Q969P0 613 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 BTBD6Q96KE9 485 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 BTN2A3PQ96KV6 586 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 PEBP4Q96S96 227 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 P2RY13Q9BPV8 354 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 SELENOOQ9BVL4 669 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 BBS2Q9BXC9 721 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 OSBPL6Q9BZF3 934 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 RRN3Q9NYV6 651 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 ZNF212Q9UDV6 495 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 STAP1Q9ULZ2 295 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 TFR2Q9UP52 801 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 REXO2Q9Y3B8 237 aaKnown RBP11.86□□□□□ -0.51
SNX1-204ENST00000559061 CACNA1IQ9P0X4 2223 aa11.86□□□□□ -0.51
SNX1-204ENST00000559061 NYNRINQ9P2P1 1898 aaKnown RBP11.85□□□□□ -0.51
SNX1-204ENST00000559061 SOWAHDA6NJG2 315 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 PRRT4C9JH25 899 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 MAN2B1O00754 1011 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 LCA5LO95447 670 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 TACR2P21452 398 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 CCR1P32246 355 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 EIF2DP41214 584 aaKnown RBP11.85□□□□□ -0.51
SNX1-204ENST00000559061 DEUP1Q05D60 604 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 ANO4Q32M45 955 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 C5orf22Q49AR2 442 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 CCDC122Q5T0U0 273 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 MANEALQ5VSG8 457 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 FBXL22Q6P050 247 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 RAD9BQ6WBX8 426 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 STRADAQ7RTN6 431 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 UNC45BQ8IWX7 931 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 CFAP52Q8N1V2 620 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 SPC24Q8NBT2 197 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 OR52K2Q8NGK3 314 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 FAM172AQ8WUF8 416 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 SHDQ96IW2 340 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 PANX2Q96RD6 677 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 TKTL2Q9H0I9 626 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 CHRDQ9H2X0 955 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 MFSD1Q9H3U5 465 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 ZDHHC4Q9NPG8 344 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 PARVAQ9NVD7 372 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.85□□□□□ -0.51
SNX1-204ENST00000559061 MYO1AQ9UBC5 1043 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 RAPGEFL1Q9UHV5 662 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 SIT1Q9Y3P8 196 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 MYO18AQ92614 2054 aaKnown RBP11.85□□□□□ -0.51
SNX1-204ENST00000559061 EML5Q05BV3 1969 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 USP34Q70CQ2 3546 aa11.85□□□□□ -0.51
SNX1-204ENST00000559061 RCCD1A6NED2 376 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 FAM72CH0Y354 149 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 KAT7O95251 611 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 APOEP02649 317 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 MYBL1P10243 752 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 TDGF1P13385 188 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 HNRNPLP14866 589 aaKnown RBP eCLIP11.84□□□□□ -0.51
SNX1-204ENST00000559061 HLA-FP30511 346 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 SDC4P31431 198 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 CHKAP35790 457 aa11.84□□□□□ -0.51
SNX1-204ENST00000559061 KIR2DL1P43626 348 aaPredicted RBP11.84□□□□□ -0.51
SNX1-204ENST00000559061 RPS9P46781 194 aaKnown RBP11.84□□□□□ -0.51
SNX1-204ENST00000559061 SLC11A2P49281 568 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms