RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 WDR72Q3MJ13 1102 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 ANKRD39Q53RE8 183 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 CCDC122Q5T0U0 273 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 SFMBT2Q5VUG0 894 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 SPOPLQ6IQ16 392 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 PTCRAQ6ISU1 281 aaPredicted RBP4.25□□□□□ -1.73
ZEB1-212ENST00000558655 SLC8B1Q6J4K2 584 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 GJB7Q6PEY0 223 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 PACS1Q6VY07 963 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 DNAJB7Q7Z6W7 309 aaPredicted RBP4.25□□□□□ -1.73
ZEB1-212ENST00000558655 KIAA1328Q86T90 577 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 METTL23Q86XA0 190 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 CCDC170Q8IYT3 715 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 RBBP8NLQ8NC74 664 aaPredicted RBP4.25□□□□□ -1.73
ZEB1-212ENST00000558655 PPP1R14CQ8TAE6 165 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 COG1Q8WTW3 980 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 CCT6BQ92526 530 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 ARHGEF2Q92974 986 aaKnown RBP4.25□□□□□ -1.73
ZEB1-212ENST00000558655 KAT5Q92993 513 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 TMEM176AQ96HP8 235 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 FUBP3Q96I24 572 aaKnown RBP eCLIP4.25□□□□□ -1.73
ZEB1-212ENST00000558655 RSRC1Q96IZ7 334 aaKnown RBP4.25□□□□□ -1.73
ZEB1-212ENST00000558655 RADILQ96JH8 1075 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 TBATAQ96M53 351 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 MMS19Q96T76 1030 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 MRPL45Q9BRJ2 306 aaKnown RBP4.25□□□□□ -1.73
ZEB1-212ENST00000558655 YIPF2Q9BWQ6 316 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 PBX4Q9BYU1 374 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 ZNF518BQ9C0D4 1074 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 TRHDEQ9UKU6 1024 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 PACSIN2Q9UNF0 486 aaPredicted RBP4.25□□□□□ -1.73
ZEB1-212ENST00000558655 PCDHB12Q9Y5F1 795 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 NOTCH4Q99466 2003 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 C2orf16Q68DN1 1984 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 EFCAB8A8MWE9 144 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 CFAP99D6REC4 459 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 H3BNC9 293 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 RFPL1O75677 317 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 B3GAT3O94766 335 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 MOCS3O95396 460 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 GUCA1CO95843 209 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 CYP1A1P04798 512 aaPredicted RBP4.25□□□□□ -1.73
ZEB1-212ENST00000558655 KRT19P08727 400 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 DESP17661 470 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 SKIV2L2P42285 1042 aaKnown RBP4.25□□□□□ -1.73
ZEB1-212ENST00000558655 OR1G1P47890 313 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 ALDH7A1P49419 539 aaKnown RBP4.25□□□□□ -1.73
ZEB1-212ENST00000558655 PAPOLAP51003 745 aaKnown RBP4.25□□□□□ -1.73
ZEB1-212ENST00000558655 KIF11P52732 1056 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 CSE1LP55060 971 aaKnown RBP4.25□□□□□ -1.73
ZEB1-212ENST00000558655 CDR2Q01850 454 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 SEMA3AQ14563 771 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 RASA2Q15283 850 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 CNGA2Q16280 664 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 LONRF2Q1L5Z9 754 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 USP41Q3LFD5 358 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 INTS6LQ5JSJ4 861 aaKnown RBP4.25□□□□□ -1.73
ZEB1-212ENST00000558655 PERM1Q5SV97 790 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 AP1ARQ63HQ0 302 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 TPGS2Q68CL5 300 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 LCLAT1Q6UWP7 414 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 DSTYKQ6XUX3 929 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 CCDC81Q6ZN84 652 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 CACNA2D4Q7Z3S7 1137 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 TMTC1Q8IUR5 882 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 THEM5Q8N1Q8 247 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 TMEM130Q8N3G9 435 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 PPM1KQ8N3J5 372 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 IPMKQ8NFU5 416 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 LNX1Q8TBB1 728 aaPredicted RBP4.25□□□□□ -1.73
ZEB1-212ENST00000558655 SPPL3Q8TCT6 385 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 NINJ1Q92982 152 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 TNIP3Q96KP6 325 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 TGS1Q96RS0 853 aaKnown RBP4.25□□□□□ -1.73
ZEB1-212ENST00000558655 CHCHD6Q9BRQ6 235 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 TTPALQ9BTX7 342 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 SPON2Q9BUD6 331 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 NT5C1AQ9BXI3 368 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 GPR62Q9BZJ7 368 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 NHEJ1Q9H9Q4 299 aaPredicted RBP4.25□□□□□ -1.73
ZEB1-212ENST00000558655 FBRSQ9HAH7 460 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 CSNK1G1Q9HCP0 422 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 PNPLA8Q9NP80 782 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 SALL4Q9UJQ4 1053 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 YBX2Q9Y2T7 364 aaKnown RBP4.25□□□□□ -1.73
ZEB1-212ENST00000558655 SNX9Q9Y5X1 595 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 CAPN6Q9Y6Q1 641 aa4.25□□□□□ -1.73
ZEB1-212ENST00000558655 FAM208BQ5VWN6 2430 aa4.24□□□□□ -1.73
ZEB1-212ENST00000558655 BTNL10A8MVZ5 291 aa4.24□□□□□ -1.73
ZEB1-212ENST00000558655 TMCO5BA8MYB1 307 aa4.24□□□□□ -1.73
ZEB1-212ENST00000558655 O00370 1275 aa4.24□□□□□ -1.73
ZEB1-212ENST00000558655 MED7O43513 233 aa4.24□□□□□ -1.73
ZEB1-212ENST00000558655 RNF40O75150 1001 aa4.24□□□□□ -1.73
ZEB1-212ENST00000558655 E2F6O75461 281 aa4.24□□□□□ -1.73
ZEB1-212ENST00000558655 TADA2AO75478 443 aa4.24□□□□□ -1.73
ZEB1-212ENST00000558655 MTRF1O75570 445 aaKnown RBP4.24□□□□□ -1.73
ZEB1-212ENST00000558655 FGF18O76093 207 aa4.24□□□□□ -1.73
ZEB1-212ENST00000558655 PAHP00439 452 aa4.24□□□□□ -1.73
ZEB1-212ENST00000558655 CPP00450 1065 aa4.24□□□□□ -1.73
ZEB1-212ENST00000558655 MT-ND3P03897 115 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms