RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 HSPA12BQ96MM6 686 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 PRICKLE1Q96MT3 831 aaPredicted RBP12.39□□□□□ -0.43
HERC1-202ENST00000558324 TUBGCP2Q9BSJ2 902 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 MKRN2Q9H000 416 aaKnown RBP12.39□□□□□ -0.43
HERC1-202ENST00000558324 NUCKS1Q9H1E3 243 aaKnown RBP12.39□□□□□ -0.43
HERC1-202ENST00000558324 NDST4Q9H3R1 872 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 PRDM16Q9HAZ2 1276 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 SIX2Q9NPC8 291 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 FSCN3Q9NQT6 498 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 GGA2Q9UJY4 613 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 TLR6Q9Y2C9 796 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 THADAQ6YHU6 1953 aa12.39□□□□□ -0.43
HERC1-202ENST00000558324 ABCA7Q8IZY2 2146 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 SYNJ2BP-COX16A0A087WUM0 186 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 KCNJ18B7U540 433 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 NPC1O15118 1278 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 NDUFS2O75306 463 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 CD70P32970 193 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 RPS24P62847 133 aaKnown RBP12.38□□□□□ -0.43
HERC1-202ENST00000558324 YWHAZP63104 245 aaKnown RBP12.38□□□□□ -0.43
HERC1-202ENST00000558324 PITX1P78337 314 aaPredicted RBP12.38□□□□□ -0.43
HERC1-202ENST00000558324 ZNF33AQ06730 810 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 RAPGEF1Q13905 1077 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 KCNJ12Q14500 433 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 TAF5Q15542 800 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 MEA1Q16626 185 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 UAP1L1Q3KQV9 507 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 MIIPQ5JXC2 388 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 TMEM110Q86TL2 294 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 SLC47A2Q86VL8 602 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 TMPRSS6Q8IU80 811 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 MFN1Q8IWA4 741 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 CFAP52Q8N1V2 620 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 CARNMT1Q8N4J0 409 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 HJURPQ8NCD3 748 aaPredicted RBP12.38□□□□□ -0.43
HERC1-202ENST00000558324 C1orf131Q8NDD1 294 aaKnown RBP12.38□□□□□ -0.43
HERC1-202ENST00000558324 WFIKKN2Q8TEU8 576 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 DDX1Q92499 740 aaKnown RBP12.38□□□□□ -0.43
HERC1-202ENST00000558324 CPXM1Q96SM3 734 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 TRIM62Q9BVG3 475 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 NUSAP1Q9BXS6 441 aaKnown RBP12.38□□□□□ -0.43
HERC1-202ENST00000558324 FAM204AQ9H8W3 233 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 POPDC2Q9HBU9 364 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 TMEM9BQ9NQ34 198 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 PLCB1Q9NQ66 1216 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 LMBRD1Q9NUN5 540 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 COX16Q9P0S2 106 aa12.38□□□□□ -0.43
HERC1-202ENST00000558324 XPO7Q9UIA9 1087 aaKnown RBP12.38□□□□□ -0.43
HERC1-202ENST00000558324 TYW5A2RUC4 315 aaKnown RBP12.37□□□□□ -0.43
HERC1-202ENST00000558324 FOXN3O00409 490 aaPredicted RBP12.37□□□□□ -0.43
HERC1-202ENST00000558324 IRAK2O43187 625 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 TIMM44O43615 452 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 GRAP2O75791 330 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 TRUB2O95900 331 aaKnown RBP12.37□□□□□ -0.43
HERC1-202ENST00000558324 APOEP02649 317 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 ADRB1P08588 477 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 ERCC5P28715 1186 aaPredicted RBP12.37□□□□□ -0.43
HERC1-202ENST00000558324 CD6P30203 668 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 PTK2Q05397 1052 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 NNTQ13423 1086 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 CDH18Q13634 790 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 ENPP2Q13822 863 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 DCAF6Q58WW2 860 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 ZC3H12AQ5D1E8 599 aaKnown RBP12.37□□□□□ -0.43
HERC1-202ENST00000558324 SPDYCQ5MJ68 293 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 RAP1GAP2Q684P5 730 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 MBLAC2Q68D91 279 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 ADIPOR2Q86V24 386 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 CHSY1Q86X52 802 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 SLC41A1Q8IVJ1 513 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 RGL4Q8IZJ4 473 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 AHI1Q8N157 1196 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 WDTC1Q8N5D0 677 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.37□□□□□ -0.43
HERC1-202ENST00000558324 PRCCQ92733 491 aaPredicted RBP12.37□□□□□ -0.43
HERC1-202ENST00000558324 SIPA1Q96FS4 1042 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 TOE1Q96GM8 510 aaKnown RBP12.37□□□□□ -0.43
HERC1-202ENST00000558324 SLC39A13Q96H72 371 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 PPP1R13BQ96KQ4 1090 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 DDX50Q9BQ39 737 aaKnown RBP12.37□□□□□ -0.43
HERC1-202ENST00000558324 SYNCQ9H7C4 482 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 SAMSN1Q9NSI8 373 aaKnown RBP12.37□□□□□ -0.43
HERC1-202ENST00000558324 TAB2Q9NYJ8 693 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 EVLQ9UI08 416 aaPredicted RBP12.37□□□□□ -0.43
HERC1-202ENST00000558324 PILRBQ9UKJ0 227 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 PLA2G4CQ9UP65 541 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 FHOD1Q9Y613 1164 aa12.37□□□□□ -0.43
HERC1-202ENST00000558324 MYO18AQ92614 2054 aaKnown RBP12.36□□□□□ -0.43
HERC1-202ENST00000558324 MEI4A8MW99 385 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 CDX4O14627 284 aaPredicted RBP12.36□□□□□ -0.43
HERC1-202ENST00000558324 TM4SF5O14894 197 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 ERBB2P04626 1255 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 ACADMP11310 421 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 ENGP17813 658 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 POLR2EP19388 210 aaKnown RBP12.36□□□□□ -0.43
HERC1-202ENST00000558324 CLCN1P35523 988 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 KRT9P35527 623 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 NUMBP49757 651 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 COPAP53621 1224 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 LMAN2Q12907 356 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms