RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 FKBP3Q00688 224 aaKnown RBP16.63■□□□□ 0.25
SCFD1-224ENST00000557713 PTPRNQ16849 979 aa16.63■□□□□ 0.25
SCFD1-224ENST00000557713 HLA-BQ31612 363 aa16.63■□□□□ 0.25
SCFD1-224ENST00000557713 DCAF17Q5H9S7 520 aaPredicted RBP16.63■□□□□ 0.25
SCFD1-224ENST00000557713 ZNF658Q5TYW1 1059 aaPredicted RBP16.63■□□□□ 0.25
SCFD1-224ENST00000557713 CHST9Q7L1S5 443 aa16.63■□□□□ 0.25
SCFD1-224ENST00000557713 SLCO6A1Q86UG4 719 aa16.63■□□□□ 0.25
SCFD1-224ENST00000557713 FAM124AQ86V42 546 aa16.63■□□□□ 0.25
SCFD1-224ENST00000557713 CACUL1Q86Y37 369 aa16.63■□□□□ 0.25
SCFD1-224ENST00000557713 CYB5D2Q8WUJ1 264 aa16.63■□□□□ 0.25
SCFD1-224ENST00000557713 SLC35C1Q96A29 364 aa16.63■□□□□ 0.25
SCFD1-224ENST00000557713 LHX5Q9H2C1 402 aa16.63■□□□□ 0.25
SCFD1-224ENST00000557713 CNGB3Q9NQW8 809 aa16.63■□□□□ 0.25
SCFD1-224ENST00000557713 TM7SF3Q9NS93 570 aa16.63■□□□□ 0.25
SCFD1-224ENST00000557713 ABCB8Q9NUT2 735 aa16.63■□□□□ 0.25
SCFD1-224ENST00000557713 RMND1Q9NWS8 449 aa16.63■□□□□ 0.25
SCFD1-224ENST00000557713 KIAA1522Q9P206 1035 aaPredicted RBP16.63■□□□□ 0.25
SCFD1-224ENST00000557713 PLA2G4CQ9UP65 541 aa16.63■□□□□ 0.25
SCFD1-224ENST00000557713 ATP6V1DQ9Y5K8 247 aa16.63■□□□□ 0.25
SCFD1-224ENST00000557713 DMXL2Q8TDJ6 3036 aa16.63■□□□□ 0.25
SCFD1-224ENST00000557713 FAM208BQ5VWN6 2430 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 MSI1O43347 362 aaKnown RBP16.62■□□□□ 0.25
SCFD1-224ENST00000557713 CER1O95813 267 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 SETSIPP0DME0 302 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 ACSL1P33121 698 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 MATKP42679 507 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 SGSHP51688 502 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 PMS1P54277 932 aaKnown RBP16.62■□□□□ 0.25
SCFD1-224ENST00000557713 YWHAEP62258 255 aaKnown RBP16.62■□□□□ 0.25
SCFD1-224ENST00000557713 RING1Q06587 406 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 LRMPQ12912 555 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 FNDC3BQ53EP0 1204 aaKnown RBP16.62■□□□□ 0.25
SCFD1-224ENST00000557713 MSANTD2Q6P1R3 559 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 IL27RAQ6UWB1 636 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 LRSAM1Q6UWE0 723 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 LCLAT1Q6UWP7 414 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 CCNI2Q6ZMN8 369 aaPredicted RBP16.62■□□□□ 0.25
SCFD1-224ENST00000557713 PROSER1Q86XN7 944 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 FMR1NBQ8N0W7 255 aaPredicted RBP16.62■□□□□ 0.25
SCFD1-224ENST00000557713 SIX6OS1Q8N1H7 587 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 ZNF366Q8N895 744 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 BAHD1Q8TBE0 780 aaPredicted RBP16.62■□□□□ 0.25
SCFD1-224ENST00000557713 SLC35F5Q8WV83 523 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 CCDC34Q96HJ3 373 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 TSG101Q99816 390 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 IRX2Q9BZI1 471 aaPredicted RBP16.62■□□□□ 0.25
SCFD1-224ENST00000557713 C6orf106Q9H6K1 298 aaPredicted RBP16.62■□□□□ 0.25
SCFD1-224ENST00000557713 GDPD2Q9HCC8 539 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 OSGEPQ9NPF4 335 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 PRSS16Q9NQE7 514 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 GGA2Q9UJY4 613 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 APOBEC2Q9Y235 224 aaKnown RBP16.62■□□□□ 0.25
SCFD1-224ENST00000557713 FNDC3AQ9Y2H6 1198 aaKnown RBP16.62■□□□□ 0.25
SCFD1-224ENST00000557713 PCDHGB2Q9Y5G2 931 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 SLCO1B1Q9Y6L6 691 aa16.62■□□□□ 0.25
SCFD1-224ENST00000557713 IGLV3-27P01718 113 aa16.61■□□□□ 0.25
SCFD1-224ENST00000557713 PABPC1P11940 636 aaKnown RBP16.61■□□□□ 0.25
SCFD1-224ENST00000557713 LCP1P13796 627 aa16.61■□□□□ 0.25
SCFD1-224ENST00000557713 CSNK1EP49674 416 aaKnown RBP16.61■□□□□ 0.25
SCFD1-224ENST00000557713 RPS14P62263 151 aaKnown RBP16.61■□□□□ 0.25
SCFD1-224ENST00000557713 ZBTB16Q05516 673 aa16.61■□□□□ 0.25
SCFD1-224ENST00000557713 MPP7Q5T2T1 576 aa16.61■□□□□ 0.25
SCFD1-224ENST00000557713 PIK3R6Q5UE93 754 aa16.61■□□□□ 0.25
SCFD1-224ENST00000557713 MBLAC2Q68D91 279 aa16.61■□□□□ 0.25
SCFD1-224ENST00000557713 PMF1Q6P1K2 205 aa16.61■□□□□ 0.25
SCFD1-224ENST00000557713 AHI1Q8N157 1196 aa16.61■□□□□ 0.25
SCFD1-224ENST00000557713 SPATA20Q8TB22 786 aa16.61■□□□□ 0.25
SCFD1-224ENST00000557713 SETD7Q8WTS6 366 aaKnown RBP16.61■□□□□ 0.25
SCFD1-224ENST00000557713 TFAP2BQ92481 460 aa16.61■□□□□ 0.25
SCFD1-224ENST00000557713 GSDMAQ96QA5 445 aa16.61■□□□□ 0.25
SCFD1-224ENST00000557713 ZSWIM1Q9BR11 485 aa16.61■□□□□ 0.25
SCFD1-224ENST00000557713 FBRSQ9HAH7 460 aa16.61■□□□□ 0.25
SCFD1-224ENST00000557713 ARMCX3Q9UH62 379 aaPredicted RBP16.61■□□□□ 0.25
SCFD1-224ENST00000557713 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.61■□□□□ 0.25
SCFD1-224ENST00000557713 MUC22E2RYF6 1773 aaPredicted RBP16.61■□□□□ 0.25
SCFD1-224ENST00000557713 PKD1L2Q7Z442 2459 aa16.6■□□□□ 0.25
SCFD1-224ENST00000557713 GOLGA6L7A0A1B0GV03 622 aa16.6■□□□□ 0.25
SCFD1-224ENST00000557713 A0A1B0GVT2 93 aa16.6■□□□□ 0.25
SCFD1-224ENST00000557713 RNF225M0QZC1 329 aaPredicted RBP16.6■□□□□ 0.25
SCFD1-224ENST00000557713 PAEPP09466 180 aa16.6■□□□□ 0.25
SCFD1-224ENST00000557713 DLDP09622 509 aaKnown RBP16.6■□□□□ 0.25
SCFD1-224ENST00000557713 HOXB3P14651 431 aaPredicted RBP16.6■□□□□ 0.25
SCFD1-224ENST00000557713 TBXAS1P24557 533 aaPredicted RBP16.6■□□□□ 0.25
SCFD1-224ENST00000557713 CD70P32970 193 aa16.6■□□□□ 0.25
SCFD1-224ENST00000557713 AFF3P51826 1226 aaKnown RBP16.6■□□□□ 0.25
SCFD1-224ENST00000557713 SCAPQ12770 1279 aa16.6■□□□□ 0.25
SCFD1-224ENST00000557713 CNGA2Q16280 664 aa16.6■□□□□ 0.25
SCFD1-224ENST00000557713 FAM133BQ5BKY9 247 aaKnown RBP16.6■□□□□ 0.25
SCFD1-224ENST00000557713 WFDC5Q8TCV5 224 aa16.6■□□□□ 0.25
SCFD1-224ENST00000557713 IRGQQ8WZA9 623 aa16.6■□□□□ 0.25
SCFD1-224ENST00000557713 AZIN2Q96A70 460 aa16.6■□□□□ 0.25
SCFD1-224ENST00000557713 LMLNQ96KR4 655 aa16.6■□□□□ 0.25
SCFD1-224ENST00000557713 LHX6Q9UPM6 363 aa16.6■□□□□ 0.25
SCFD1-224ENST00000557713 TRIM49BA6NDI0 452 aa16.59■□□□□ 0.25
SCFD1-224ENST00000557713 PMM2O15305 246 aa16.59■□□□□ 0.25
SCFD1-224ENST00000557713 TBL1XO60907 577 aa16.59■□□□□ 0.25
SCFD1-224ENST00000557713 DKK1O94907 266 aa16.59■□□□□ 0.25
SCFD1-224ENST00000557713 ATP5BP06576 529 aaKnown RBP16.59■□□□□ 0.25
SCFD1-224ENST00000557713 SLC6A4P31645 630 aa16.59■□□□□ 0.25
SCFD1-224ENST00000557713 FMO5P49326 533 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms