RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 HDDC3Q8N4P3 179 aa14.75□□□□□ -0.05
SNX6-210ENST00000557341 ZNF557Q8N988 423 aaPredicted RBP14.75□□□□□ -0.05
SNX6-210ENST00000557341 TMA16Q96EY4 203 aaKnown RBP14.75□□□□□ -0.05
SNX6-210ENST00000557341 SIPA1Q96FS4 1042 aa14.75□□□□□ -0.05
SNX6-210ENST00000557341 ZNF419Q96HQ0 510 aaPredicted RBP14.75□□□□□ -0.05
SNX6-210ENST00000557341 KREMEN1Q96MU8 473 aa14.75□□□□□ -0.05
SNX6-210ENST00000557341 SERPINB11Q96P15 392 aa14.75□□□□□ -0.05
SNX6-210ENST00000557341 SRRTQ9BXP5 876 aaKnown RBP14.75□□□□□ -0.05
SNX6-210ENST00000557341 MIS12Q9H081 205 aa14.75□□□□□ -0.05
SNX6-210ENST00000557341 FSCN3Q9NQT6 498 aa14.75□□□□□ -0.05
SNX6-210ENST00000557341 ST7Q9NRC1 585 aa14.75□□□□□ -0.05
SNX6-210ENST00000557341 ABCB8Q9NUT2 735 aa14.75□□□□□ -0.05
SNX6-210ENST00000557341 GGA2Q9UJY4 613 aa14.75□□□□□ -0.05
SNX6-210ENST00000557341 CNTN6Q9UQ52 1028 aa14.75□□□□□ -0.05
SNX6-210ENST00000557341 ASPMQ8IZT6 3477 aa14.75□□□□□ -0.05
SNX6-210ENST00000557341 AKAP13Q12802 2813 aa14.75□□□□□ -0.05
SNX6-210ENST00000557341 TYW5A2RUC4 315 aaKnown RBP14.74□□□□□ -0.05
SNX6-210ENST00000557341 MEI4A8MW99 385 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 MED7O43513 233 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 SYPP08247 313 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 ACADMP11310 421 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 PABPC1P11940 636 aaKnown RBP14.74□□□□□ -0.05
SNX6-210ENST00000557341 GNSP15586 552 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 TPMTP51580 245 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 SGSHP51688 502 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 COPAP53621 1224 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 TBX4P57082 545 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 MEA1Q16626 185 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 ST3GAL2Q16842 350 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 PLEKHG6Q3KR16 790 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 FNDC3BQ53EP0 1204 aaKnown RBP14.74□□□□□ -0.05
SNX6-210ENST00000557341 WDR45BQ5MNZ6 344 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 MPP7Q5T2T1 576 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 CHST9Q7L1S5 443 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 MINDY1Q8N5J2 469 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.74□□□□□ -0.05
SNX6-210ENST00000557341 DEFB124Q8NES8 71 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 FAM149B1Q96BN6 582 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 TOE1Q96GM8 510 aaKnown RBP14.74□□□□□ -0.05
SNX6-210ENST00000557341 TRIM62Q9BVG3 475 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 SLC32A1Q9H598 525 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 ITM2CQ9NQX7 267 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 WSB2Q9NYS7 404 aaPredicted RBP14.74□□□□□ -0.05
SNX6-210ENST00000557341 PLA2G4CQ9UP65 541 aa14.74□□□□□ -0.05
SNX6-210ENST00000557341 KCNJ18B7U540 433 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 ARHGAP33O14559 1287 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 ACSL4O60488 711 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 OPHN1O60890 802 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 TBL1XO60907 577 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 IGLV3-19P01714 112 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 OXTRP30559 389 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 GPD2P43304 727 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 ACADSBP45954 432 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 RPL34P49207 117 aaKnown RBP14.73□□□□□ -0.05
SNX6-210ENST00000557341 FOXC1Q12948 553 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 SEMA3BQ13214 749 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 NNTQ13423 1086 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 CAMK2GQ13555 558 aaPredicted RBP14.73□□□□□ -0.05
SNX6-210ENST00000557341 FAM133BQ5BKY9 247 aaKnown RBP14.73□□□□□ -0.05
SNX6-210ENST00000557341 PIK3R6Q5UE93 754 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 RFWD3Q6PCD5 774 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 TRIM65Q6PJ69 517 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 ENOSF1Q7L5Y1 443 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 HJURPQ8NCD3 748 aaPredicted RBP14.73□□□□□ -0.05
SNX6-210ENST00000557341 CADM4Q8NFZ8 388 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 OR2T3Q8NH03 318 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 DQX1Q8TE96 717 aaKnown RBP14.73□□□□□ -0.05
SNX6-210ENST00000557341 CYB5D2Q8WUJ1 264 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 AZIN2Q96A70 460 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 FAM81BQ96LP2 452 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 PRICKLE1Q96MT3 831 aaPredicted RBP14.73□□□□□ -0.05
SNX6-210ENST00000557341 DDX50Q9BQ39 737 aaKnown RBP14.73□□□□□ -0.05
SNX6-210ENST00000557341 GPR174Q9BXC1 333 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 TMEM245Q9H330 911 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 FBRSQ9HAH7 460 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 UBE2TQ9NPD8 197 aaPredicted RBP14.73□□□□□ -0.05
SNX6-210ENST00000557341 KIAA1468Q9P260 1216 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 RWDD2AQ9UIY3 292 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 TLR6Q9Y2C9 796 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 NFE2L3Q9Y4A8 694 aa14.73□□□□□ -0.05
SNX6-210ENST00000557341 UPK3BL1B0FP48 263 aa14.72□□□□□ -0.05
SNX6-210ENST00000557341 UPK3BL2E5RIL1 263 aa14.72□□□□□ -0.05
SNX6-210ENST00000557341 THAP12O43422 761 aa14.72□□□□□ -0.05
SNX6-210ENST00000557341 LETM1O95202 739 aaPredicted RBP14.72□□□□□ -0.05
SNX6-210ENST00000557341 FYNP06241 537 aa14.72□□□□□ -0.05
SNX6-210ENST00000557341 ATP5BP06576 529 aaKnown RBP14.72□□□□□ -0.05
SNX6-210ENST00000557341 HLA-EP13747 358 aa14.72□□□□□ -0.05
SNX6-210ENST00000557341 GNA15P30679 374 aa14.72□□□□□ -0.05
SNX6-210ENST00000557341 SLC6A4P31645 630 aa14.72□□□□□ -0.05
SNX6-210ENST00000557341 UBE2HP62256 183 aa14.72□□□□□ -0.05
SNX6-210ENST00000557341 MBLAC2Q68D91 279 aa14.72□□□□□ -0.05
SNX6-210ENST00000557341 KIAA0907Q7Z7F0 614 aaPredicted RBP14.72□□□□□ -0.05
SNX6-210ENST00000557341 ADIPOR2Q86V24 386 aa14.72□□□□□ -0.05
SNX6-210ENST00000557341 MFN1Q8IWA4 741 aa14.72□□□□□ -0.05
SNX6-210ENST00000557341 SCUBE3Q8IX30 993 aa14.72□□□□□ -0.05
SNX6-210ENST00000557341 WFDC5Q8TCV5 224 aa14.72□□□□□ -0.05
SNX6-210ENST00000557341 STK32AQ8WU08 396 aa14.72□□□□□ -0.05
SNX6-210ENST00000557341 FCRL2Q96LA5 508 aaPredicted RBP14.72□□□□□ -0.05
SNX6-210ENST00000557341 NUP58Q9BVL2 599 aa14.72□□□□□ -0.05
SNX6-210ENST00000557341 SPEGQ15772 3267 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms