RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 GOLGA8CPA6NN73 597 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 RNF225M0QZC1 329 aaPredicted RBP7.64□□□□□ -1.19
SCFD1-222ENST00000556768 GFRA2O00451 464 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 DCLK1O15075 740 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 THAP12O43422 761 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 CAVIN2O95810 425 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 LATS1O95835 1130 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 ADH1BP00325 375 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 LTFP02788 710 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 KLKB1P03952 638 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 NCAM1P13591 858 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 GNA15P30679 374 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 KRT9P35527 623 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 MPLP40238 635 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 DPP6P42658 865 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 DAOAP59103 153 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 BPIFB4P59827 614 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 COPS2P61201 443 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 EIF4HQ15056 248 aaKnown RBP7.64□□□□□ -1.19
SCFD1-222ENST00000556768 TRIP4Q15650 581 aaPredicted RBP7.64□□□□□ -1.19
SCFD1-222ENST00000556768 MEA1Q16626 185 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 ARHGAP44Q17R89 818 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 SPDYCQ5MJ68 293 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 TRIM65Q6PJ69 517 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 SLC36A4Q6YBV0 504 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 ANKS1BQ7Z6G8 1248 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 RASSF3Q86WH2 238 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 CPXM2Q8N436 756 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 UBR7Q8N806 425 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 ZNF511Q8NB15 262 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 MDGA1Q8NFP4 955 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 TFAP2BQ92481 460 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 NDRG1Q92597 394 aaKnown RBP7.64□□□□□ -1.19
SCFD1-222ENST00000556768 WBP2Q969T9 261 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 PDCL3Q9H2J4 239 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 SFMBT1Q9UHJ3 866 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 SLC12A6Q9UHW9 1150 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 INVSQ9Y283 1065 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 SLC27A6Q9Y2P4 619 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.64□□□□□ -1.19
SCFD1-222ENST00000556768 MIA3Q5JRA6 1907 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 TICRRQ7Z2Z1 1910 aa7.64□□□□□ -1.19
SCFD1-222ENST00000556768 CEP250Q9BV73 2442 aa7.63□□□□□ -1.19
SCFD1-222ENST00000556768 PIK3R2O00459 728 aa7.63□□□□□ -1.19
SCFD1-222ENST00000556768 IRAK2O43187 625 aa7.63□□□□□ -1.19
SCFD1-222ENST00000556768 AP5Z1O43299 807 aa7.63□□□□□ -1.19
SCFD1-222ENST00000556768 EPN2O95208 641 aa7.63□□□□□ -1.19
SCFD1-222ENST00000556768 PENKP01210 267 aaPredicted RBP7.63□□□□□ -1.19
SCFD1-222ENST00000556768 TGM1P22735 817 aa7.63□□□□□ -1.19
SCFD1-222ENST00000556768 DHPSP49366 369 aaPredicted RBP7.63□□□□□ -1.19
SCFD1-222ENST00000556768 MESP2Q0VG99 397 aa7.63□□□□□ -1.19
SCFD1-222ENST00000556768 MAN2A1Q16706 1144 aa7.63□□□□□ -1.19
SCFD1-222ENST00000556768 PKDCCQ504Y2 493 aa7.63□□□□□ -1.19
SCFD1-222ENST00000556768 CYP2U1Q7Z449 544 aa7.63□□□□□ -1.19
SCFD1-222ENST00000556768 ARHGEF19Q8IW93 802 aa7.63□□□□□ -1.19
SCFD1-222ENST00000556768 ZNF606Q8WXB4 792 aa7.63□□□□□ -1.19
SCFD1-222ENST00000556768 KAT5Q92993 513 aa7.63□□□□□ -1.19
SCFD1-222ENST00000556768 SERPINB11Q96P15 392 aa7.63□□□□□ -1.19
SCFD1-222ENST00000556768 IRX2Q9BZI1 471 aaPredicted RBP7.63□□□□□ -1.19
SCFD1-222ENST00000556768 CIPCQ9C0C6 399 aa7.63□□□□□ -1.19
SCFD1-222ENST00000556768 DUSP15Q9H1R2 295 aaPredicted RBP7.63□□□□□ -1.19
SCFD1-222ENST00000556768 SYNCQ9H7C4 482 aa7.63□□□□□ -1.19
SCFD1-222ENST00000556768 PARD6AQ9NPB6 346 aa7.63□□□□□ -1.19
SCFD1-222ENST00000556768 ZDHHC4Q9NPG8 344 aa7.63□□□□□ -1.19
SCFD1-222ENST00000556768 CNTN6Q9UQ52 1028 aa7.63□□□□□ -1.19
SCFD1-222ENST00000556768 NUP210Q8TEM1 1887 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-222ENST00000556768 TMEM229AB2RXF0 380 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 PRRT4C9JH25 899 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 KHNYNO15037 678 aaKnown RBP7.62□□□□□ -1.19
SCFD1-222ENST00000556768 TRIM24O15164 1050 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 NDUFB5O43674 189 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 ADAM23O75077 832 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 NDUFS2O75306 463 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 ATP5BP06576 529 aaKnown RBP7.62□□□□□ -1.19
SCFD1-222ENST00000556768 ACADMP11310 421 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 HNRNPLP14866 589 aaKnown RBP eCLIP7.62□□□□□ -1.193e-7■■□□□ 12.7
SCFD1-222ENST00000556768 SLC9A1P19634 815 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 MPSTP25325 297 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 HOXC13P31276 330 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 P2RY2P41231 377 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 WASP42768 502 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 GPD2P43304 727 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 ATXN1P54253 815 aaKnown RBP7.62□□□□□ -1.19
SCFD1-222ENST00000556768 EMP3P54852 163 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 TBX4P57082 545 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 YWHAZP63104 245 aaKnown RBP7.62□□□□□ -1.19
SCFD1-222ENST00000556768 LSM11P83369 360 aaKnown RBP eCLIP7.62□□□□□ -1.193e-6■□□□□ 10
SCFD1-222ENST00000556768 RING1Q06587 406 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 VWA3BQ502W6 1294 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 MPP7Q5T2T1 576 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 FYB2Q5VWT5 728 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 EGFLAMQ63HQ2 1017 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 PMS2CLQ68D20 193 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 TOGARAM2Q6ZUX3 1019 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 SFTPA1Q8IWL2 248 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 ANKRD20A12PQ8NF67 263 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 IPO4Q8TEX9 1081 aaKnown RBP7.62□□□□□ -1.19
SCFD1-222ENST00000556768 AZIN2Q96A70 460 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 KREMEN1Q96MU8 473 aa7.62□□□□□ -1.19
SCFD1-222ENST00000556768 TUBGCP2Q9BSJ2 902 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms