RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 HOXD9P28356 352 aaPredicted RBP14.56□□□□□ -0.08
ACTN1-219ENST00000556432 PIK3CAP42336 1068 aa14.56□□□□□ -0.08
ACTN1-219ENST00000556432 AMPD3Q01432 767 aa14.56□□□□□ -0.08
ACTN1-219ENST00000556432 KCNH2Q12809 1159 aa14.56□□□□□ -0.08
ACTN1-219ENST00000556432 TBC1D25Q3MII6 688 aa14.56□□□□□ -0.08
ACTN1-219ENST00000556432 MPPE1Q53F39 396 aa14.56□□□□□ -0.08
ACTN1-219ENST00000556432 BROXQ5VW32 411 aa14.56□□□□□ -0.08
ACTN1-219ENST00000556432 SPOPLQ6IQ16 392 aa14.56□□□□□ -0.08
ACTN1-219ENST00000556432 PCSK4Q6UW60 755 aa14.56□□□□□ -0.08
ACTN1-219ENST00000556432 PLEKHO2Q8TD55 490 aa14.56□□□□□ -0.08
ACTN1-219ENST00000556432 SAP25Q8TEE9 199 aa14.56□□□□□ -0.08
ACTN1-219ENST00000556432 ORAI3Q9BRQ5 295 aa14.56□□□□□ -0.08
ACTN1-219ENST00000556432 FBXL12Q9NXK8 326 aa14.56□□□□□ -0.08
ACTN1-219ENST00000556432 TFIP11Q9UBB9 837 aaKnown RBP14.56□□□□□ -0.08
ACTN1-219ENST00000556432 CLCA2Q9UQC9 943 aa14.56□□□□□ -0.08
ACTN1-219ENST00000556432 COL6A6A6NMZ7 2263 aa14.55□□□□□ -0.08
ACTN1-219ENST00000556432 TP53BP1Q12888 1972 aaPredicted RBP14.55□□□□□ -0.08
ACTN1-219ENST00000556432 CD2BP2O95400 341 aaKnown RBP14.55□□□□□ -0.08
ACTN1-219ENST00000556432 C4BPAP04003 597 aaKnown RBP14.55□□□□□ -0.08
ACTN1-219ENST00000556432 ATP5BP06576 529 aaKnown RBP14.55□□□□□ -0.08
ACTN1-219ENST00000556432 HLA-FP30511 346 aa14.55□□□□□ -0.08
ACTN1-219ENST00000556432 ASPAP45381 313 aa14.55□□□□□ -0.08
ACTN1-219ENST00000556432 HARS2P49590 506 aaKnown RBP14.55□□□□□ -0.08
ACTN1-219ENST00000556432 ARHGAP40Q5TG30 622 aa14.55□□□□□ -0.08
ACTN1-219ENST00000556432 FAM173BQ6P4H8 233 aa14.55□□□□□ -0.08
ACTN1-219ENST00000556432 NCEH1Q6PIU2 408 aa14.55□□□□□ -0.08
ACTN1-219ENST00000556432 AHI1Q8N157 1196 aa14.55□□□□□ -0.08
ACTN1-219ENST00000556432 ARHGAP18Q8N392 663 aa14.55□□□□□ -0.08
ACTN1-219ENST00000556432 ZNF276Q8N554 614 aa14.55□□□□□ -0.08
ACTN1-219ENST00000556432 PARD3BQ8TEW8 1205 aa14.55□□□□□ -0.08
ACTN1-219ENST00000556432 PLD4Q96BZ4 506 aa14.55□□□□□ -0.08
ACTN1-219ENST00000556432 TWNKQ96RR1 684 aa14.55□□□□□ -0.08
ACTN1-219ENST00000556432 NT5C1AQ9BXI3 368 aa14.55□□□□□ -0.08
ACTN1-219ENST00000556432 IMPG2Q9BZV3 1241 aa14.55□□□□□ -0.08
ACTN1-219ENST00000556432 DNAI2Q9GZS0 605 aa14.55□□□□□ -0.08
ACTN1-219ENST00000556432 PABPC3Q9H361 631 aaKnown RBP14.55□□□□□ -0.08
ACTN1-219ENST00000556432 CGNQ9P2M7 1197 aaKnown RBP14.55□□□□□ -0.08
ACTN1-219ENST00000556432 SUN2Q9UH99 717 aa14.55□□□□□ -0.08
ACTN1-219ENST00000556432 GGA2Q9UJY4 613 aa14.55□□□□□ -0.08
ACTN1-219ENST00000556432 ATMQ13315 3056 aa14.55□□□□□ -0.08
ACTN1-219ENST00000556432 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.54□□□□□ -0.08
ACTN1-219ENST00000556432 LRRC72A6NJI9 287 aa14.54□□□□□ -0.08
ACTN1-219ENST00000556432 ARHGAP6O43182 974 aa14.54□□□□□ -0.08
ACTN1-219ENST00000556432 RNASEH1O60930 286 aaKnown RBP14.54□□□□□ -0.08
ACTN1-219ENST00000556432 WNT1P04628 370 aa14.54□□□□□ -0.08
ACTN1-219ENST00000556432 RPN1P04843 607 aaKnown RBP14.54□□□□□ -0.08
ACTN1-219ENST00000556432 DLDP09622 509 aaKnown RBP14.54□□□□□ -0.08
ACTN1-219ENST00000556432 PABPC1P11940 636 aaKnown RBP14.54□□□□□ -0.08
ACTN1-219ENST00000556432 CD58P19256 250 aa14.54□□□□□ -0.08
ACTN1-219ENST00000556432 POLR2EP19388 210 aaKnown RBP14.54□□□□□ -0.08
ACTN1-219ENST00000556432 CD38P28907 300 aa14.54□□□□□ -0.08
ACTN1-219ENST00000556432 EPHA8P29322 1005 aaPredicted RBP14.54□□□□□ -0.08
ACTN1-219ENST00000556432 TMPRSS3P57727 454 aa14.54□□□□□ -0.08
ACTN1-219ENST00000556432 RHDQ02161 417 aa14.54□□□□□ -0.08
ACTN1-219ENST00000556432 SFSWAPQ12872 951 aaKnown RBP14.54□□□□□ -0.08
ACTN1-219ENST00000556432 SHBQ15464 509 aa14.54□□□□□ -0.08
ACTN1-219ENST00000556432 SLC45A4Q5BKX6 768 aa14.54□□□□□ -0.08
ACTN1-219ENST00000556432 MBLAC2Q68D91 279 aa14.54□□□□□ -0.08
ACTN1-219ENST00000556432 KDM7AQ6ZMT4 941 aa14.54□□□□□ -0.08
ACTN1-219ENST00000556432 ERICH1Q86X53 443 aa14.54□□□□□ -0.08
ACTN1-219ENST00000556432 FMNL3Q8IVF7 1028 aa14.54□□□□□ -0.08
ACTN1-219ENST00000556432 FAM181AQ8N9Y4 354 aa14.54□□□□□ -0.08
ACTN1-219ENST00000556432 TAF4BQ92750 862 aa14.54□□□□□ -0.08
ACTN1-219ENST00000556432 DHX58Q96C10 678 aa14.54□□□□□ -0.08
ACTN1-219ENST00000556432 MTG2Q9H4K7 406 aa14.54□□□□□ -0.08
ACTN1-219ENST00000556432 KBTBD4Q9NVX7 518 aa14.54□□□□□ -0.08
ACTN1-219ENST00000556432 MYLKQ15746 1914 aa14.54□□□□□ -0.08
ACTN1-219ENST00000556432 PLXNA2O75051 1894 aa14.53□□□□□ -0.08
ACTN1-219ENST00000556432 A0A1W2PP55 124 aa14.53□□□□□ -0.08
ACTN1-219ENST00000556432 RNASEH2AO75792 299 aaKnown RBP14.53□□□□□ -0.08
ACTN1-219ENST00000556432 CKMT2P17540 419 aa14.53□□□□□ -0.08
ACTN1-219ENST00000556432 GALCP54803 685 aa14.53□□□□□ -0.08
ACTN1-219ENST00000556432 PCBP4P57723 403 aaKnown RBP14.53□□□□□ -0.08
ACTN1-219ENST00000556432 ST8SIA6P61647 398 aa14.53□□□□□ -0.08
ACTN1-219ENST00000556432 YWHAGP61981 247 aaKnown RBP eCLIP14.53□□□□□ -0.08
ACTN1-219ENST00000556432 KCNC4Q03721 635 aa14.53□□□□□ -0.08
ACTN1-219ENST00000556432 ILKQ13418 452 aa14.53□□□□□ -0.08
ACTN1-219ENST00000556432 KNOP1Q1ED39 458 aaKnown RBP14.53□□□□□ -0.08
ACTN1-219ENST00000556432 USP30Q70CQ3 517 aa14.53□□□□□ -0.08
ACTN1-219ENST00000556432 ADIPOR2Q86V24 386 aa14.53□□□□□ -0.08
ACTN1-219ENST00000556432 C12orf56Q8IXR9 622 aa14.53□□□□□ -0.08
ACTN1-219ENST00000556432 ZNF248Q8NDW4 579 aa14.53□□□□□ -0.08
ACTN1-219ENST00000556432 GOLGA5Q8TBA6 731 aa14.53□□□□□ -0.08
ACTN1-219ENST00000556432 TSC1Q92574 1164 aa14.53□□□□□ -0.08
ACTN1-219ENST00000556432 TMA16Q96EY4 203 aaKnown RBP14.53□□□□□ -0.08
ACTN1-219ENST00000556432 SERAC1Q96JX3 654 aa14.53□□□□□ -0.08
ACTN1-219ENST00000556432 OMDQ99983 421 aa14.53□□□□□ -0.08
ACTN1-219ENST00000556432 DUSP16Q9BY84 665 aa14.53□□□□□ -0.08
ACTN1-219ENST00000556432 CUEDC2Q9H467 287 aa14.53□□□□□ -0.08
ACTN1-219ENST00000556432 CPNE5Q9HCH3 593 aa14.53□□□□□ -0.08
ACTN1-219ENST00000556432 SLC39A2Q9NP94 309 aa14.53□□□□□ -0.08
ACTN1-219ENST00000556432 SERGEFQ9UGK8 458 aa14.53□□□□□ -0.08
ACTN1-219ENST00000556432 USP3Q9Y6I4 520 aa14.53□□□□□ -0.08
ACTN1-219ENST00000556432 MID1O15344 667 aa14.52□□□□□ -0.09
ACTN1-219ENST00000556432 ASS1P00966 412 aaKnown RBP14.52□□□□□ -0.09
ACTN1-219ENST00000556432 HLA-DRAP01903 254 aa14.52□□□□□ -0.09
ACTN1-219ENST00000556432 PDCP20941 246 aa14.52□□□□□ -0.09
ACTN1-219ENST00000556432 UCNP55089 124 aa14.52□□□□□ -0.09
ACTN1-219ENST00000556432 DLG4P78352 724 aa14.52□□□□□ -0.09
ACTN1-219ENST00000556432 CLDN10P78369 228 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms