RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 ECT2Q9H8V3 914 aa7.91□□□□□ -1.14
TDP1-214ENST00000556063 OSGEPQ9NPF4 335 aa7.91□□□□□ -1.14
TDP1-214ENST00000556063 SPHK2Q9NRA0 654 aa7.91□□□□□ -1.14
TDP1-214ENST00000556063 DONSONQ9NYP3 566 aa7.91□□□□□ -1.14
TDP1-214ENST00000556063 STIM2Q9P246 746 aa7.91□□□□□ -1.14
TDP1-214ENST00000556063 STOML2Q9UJZ1 356 aa7.91□□□□□ -1.14
TDP1-214ENST00000556063 FBXL21Q9UKT6 434 aa7.91□□□□□ -1.14
TDP1-214ENST00000556063 USP18Q9UMW8 372 aa7.91□□□□□ -1.14
TDP1-214ENST00000556063 DUSP12Q9UNI6 340 aa7.91□□□□□ -1.14
TDP1-214ENST00000556063 PPP2R2CQ9Y2T4 447 aa7.91□□□□□ -1.14
TDP1-214ENST00000556063 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.91□□□□□ -1.14
TDP1-214ENST00000556063 REXO2Q9Y3B8 237 aaKnown RBP7.91□□□□□ -1.14
TDP1-214ENST00000556063 CDH23Q9H251 3354 aa7.91□□□□□ -1.14
TDP1-214ENST00000556063 MACROD2A1Z1Q3 448 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 GOLGA6L9A6NEM1 432 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.9□□□□□ -1.14
TDP1-214ENST00000556063 MAN2B1O00754 1011 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 SCAMP3O14828 347 aaKnown RBP7.9□□□□□ -1.14
TDP1-214ENST00000556063 GREM1O60565 184 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 LRCH4O75427 683 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 ADH5P11766 374 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 ALADP13716 330 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 ARSAP15289 507 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 TACR2P21452 398 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 MSNP26038 577 aaKnown RBP7.9□□□□□ -1.14
TDP1-214ENST00000556063 HTR7P34969 479 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 OXCT1P55809 520 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 ZNF252P-AS1Q0IIN9 211 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 SCAPQ12770 1279 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 DHCR24Q15392 516 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 ANO4Q32M45 955 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 MS4A13Q5J8X5 152 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 LY6G5CQ5SRR4 150 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 MPP7Q5T2T1 576 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 ERMARDQ5T6L9 678 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 SH3PXD2AQ5TCZ1 1133 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 RAP1GAP2Q684P5 730 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 TPGS1Q6ZTW0 290 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 DAAM2Q86T65 1068 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 RALGPS2Q86X27 583 aaPredicted RBP7.9□□□□□ -1.14
TDP1-214ENST00000556063 MAP7D3Q8IWC1 876 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 RHOT1Q8IXI2 618 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 FAM217AQ8IXS0 508 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 LGI2Q8N0V4 545 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 TPCN2Q8NHX9 752 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 RIN3Q8TB24 985 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 KIAA1524Q8TCG1 905 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 DDI1Q8WTU0 396 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 TEKT4Q8WW24 435 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 WBP2Q969T9 261 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 ZFYVE19Q96K21 471 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 BTBD6Q96KE9 485 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 ZNF830Q96NB3 372 aaPredicted RBP7.9□□□□□ -1.14
TDP1-214ENST00000556063 ALS2CR12Q96Q35 445 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 XPO6Q96QU8 1125 aaKnown RBP7.9□□□□□ -1.14
TDP1-214ENST00000556063 EPAS1Q99814 870 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 BBS2Q9BXC9 721 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 SLC2A11Q9BYW1 496 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 LACRTQ9GZZ8 138 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 LINC00597Q9H2U6 94 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 RETREG1Q9H6L5 497 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 MARK1Q9P0L2 795 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 WNT16Q9UBV4 365 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 PCSK1NQ9UHG2 260 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 GUCA1BQ9UMX6 200 aa7.9□□□□□ -1.14
TDP1-214ENST00000556063 MRPS17Q9Y2R5 130 aaKnown RBP7.9□□□□□ -1.14
TDP1-214ENST00000556063 SZT2Q5T011 3432 aa7.9□□□□□ -1.15
TDP1-214ENST00000556063 RCCD1A6NED2 376 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 NEDD8-MDP1E9PL57 170 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 HOXC11O43248 304 aaPredicted RBP7.89□□□□□ -1.15
TDP1-214ENST00000556063 DCXO43602 365 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 BUB1O43683 1085 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 BUB1BO60566 1050 aaPredicted RBP7.89□□□□□ -1.15
TDP1-214ENST00000556063 TSPAN3O60637 253 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 CYP17A1P05093 508 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 L1CAMP32004 1257 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 ARL4AP40617 200 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 CETN2P41208 172 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 EIF2DP41214 584 aaKnown RBP7.89□□□□□ -1.15
TDP1-214ENST00000556063 ATXN1P54253 815 aaKnown RBP7.89□□□□□ -1.15
TDP1-214ENST00000556063 NRG1Q02297 640 aaPredicted RBP7.89□□□□□ -1.15
TDP1-214ENST00000556063 PRKCQQ04759 706 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 TNK2Q07912 1038 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 AUHQ13825 339 aaKnown RBP7.89□□□□□ -1.15
TDP1-214ENST00000556063 KRT81Q14533 505 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 E2F5Q15329 346 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 SLC44A4Q53GD3 710 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 HS1BP3Q53T59 392 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 FAM133BQ5BKY9 247 aaKnown RBP7.89□□□□□ -1.15
TDP1-214ENST00000556063 PIK3R6Q5UE93 754 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 LRRC38Q5VT99 294 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 TRIM68Q6AZZ1 485 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 NADSYN1Q6IA69 706 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 RHBDF2Q6PJF5 856 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 POLNQ7Z5Q5 900 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 TMEM25Q86YD3 366 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 SUGP1Q8IWZ8 645 aaKnown RBP7.89□□□□□ -1.15
TDP1-214ENST00000556063 CCDC185Q8N715 623 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 ASIC4Q96FT7 647 aa7.89□□□□□ -1.15
TDP1-214ENST00000556063 RPRD1AQ96P16 312 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms