RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 URB1O60287 2271 aaKnown RBP15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 O00370 1275 aa14.99□□□□□ -0.01
CHMP4BP1-201ENST00000556017 XPO1O14980 1071 aaKnown RBP14.99□□□□□ -0.01
CHMP4BP1-201ENST00000556017 MSI1O43347 362 aaKnown RBP14.99□□□□□ -0.01
CHMP4BP1-201ENST00000556017 SYNCRIPO60506 623 aaKnown RBP14.99□□□□□ -0.01
CHMP4BP1-201ENST00000556017 IGLV3-27P01718 113 aa14.99□□□□□ -0.01
CHMP4BP1-201ENST00000556017 ATXN1LP0C7T5 689 aaKnown RBP14.99□□□□□ -0.01
CHMP4BP1-201ENST00000556017 CSNK1EP49674 416 aaKnown RBP14.99□□□□□ -0.01
CHMP4BP1-201ENST00000556017 PMS1P54277 932 aaKnown RBP14.99□□□□□ -0.01
CHMP4BP1-201ENST00000556017 ADIGQ0VDE8 80 aa14.99□□□□□ -0.01
CHMP4BP1-201ENST00000556017 KIF19Q2TAC6 998 aa14.99□□□□□ -0.01
CHMP4BP1-201ENST00000556017 GOLGA7BQ2TAP0 167 aa14.99□□□□□ -0.01
CHMP4BP1-201ENST00000556017 FAM133BQ5BKY9 247 aaKnown RBP14.99□□□□□ -0.01
CHMP4BP1-201ENST00000556017 BSPRYQ5W0U4 402 aa14.99□□□□□ -0.01
CHMP4BP1-201ENST00000556017 SERPINA13PQ6UXR4 307 aa14.99□□□□□ -0.01
CHMP4BP1-201ENST00000556017 FAM124AQ86V42 546 aa14.99□□□□□ -0.01
CHMP4BP1-201ENST00000556017 ARHGAP18Q8N392 663 aa14.99□□□□□ -0.01
CHMP4BP1-201ENST00000556017 EDEM1Q92611 657 aa14.99□□□□□ -0.01
CHMP4BP1-201ENST00000556017 MYEOVQ96EZ4 313 aa14.99□□□□□ -0.01
CHMP4BP1-201ENST00000556017 SPATA32Q96LK8 384 aa14.99□□□□□ -0.01
CHMP4BP1-201ENST00000556017 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.99□□□□□ -0.01
CHMP4BP1-201ENST00000556017 DOCK9Q9BZ29 2069 aa14.99□□□□□ -0.01
CHMP4BP1-201ENST00000556017 ARID1BQ8NFD5 2236 aaPredicted RBP14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 TIMM44O43615 452 aa14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 TRIM21P19474 475 aaKnown RBP14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 RPL13P26373 211 aaKnown RBP14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 MATKP42679 507 aa14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 RPS14P62263 151 aaKnown RBP14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 CAMK2BQ13554 666 aa14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 MPPE1Q53F39 396 aa14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 LAYNQ6UX15 382 aa14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 CHST9Q7L1S5 443 aa14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 RSRC2Q7L4I2 434 aaKnown RBP14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 MDM1Q8TC05 714 aa14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 TFAP2BQ92481 460 aa14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 BIRC7Q96CA5 298 aa14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 PCED1AQ9H1Q7 454 aa14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 MTG2Q9H4K7 406 aa14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 TM9SF3Q9HD45 589 aa14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 PRSS16Q9NQE7 514 aa14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 ABCB8Q9NUT2 735 aa14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 STRIP2Q9ULQ0 834 aa14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 HBS1LQ9Y450 684 aaKnown RBP14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 PCDHB9Q9Y5E1 797 aa14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 PCDHGB2Q9Y5G2 931 aa14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 SNX11Q9Y5W9 270 aa14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 KNTC1P50748 2209 aa14.98□□□□□ -0.01
CHMP4BP1-201ENST00000556017 COL5A1P20908 1838 aaPredicted RBP14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 ZNF202O95125 648 aa14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 CYBBP04839 570 aa14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 SLC6A4P31645 630 aa14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 CD70P32970 193 aa14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 BCAT1P54687 386 aa14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 DAOAP59103 153 aa14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 BST2Q10589 180 aaKnown RBP14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 CUL2Q13617 745 aa14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 ADGRF1Q5T601 910 aa14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 MSANTD2Q6P1R3 559 aa14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 C19orf48Q6RUI8 117 aa14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 TMPRSS7Q7RTY8 843 aa14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 HSCBQ8IWL3 235 aa14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 SCML4Q8N228 414 aa14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 TTC39CQ8N584 583 aa14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 UBA3Q8TBC4 463 aa14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 KCTD13Q8WZ19 329 aa14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 LHX5Q9H2C1 402 aa14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 OSGEPQ9NPF4 335 aa14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 GGA2Q9UJY4 613 aa14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 INTS6Q9UL03 887 aaKnown RBP14.97□□□□□ -0.01
CHMP4BP1-201ENST00000556017 ASXL3Q9C0F0 2248 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 GOLGA6L7A0A1B0GV03 622 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 A0A1W2PQ27 194 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 A0A1W2PQ64 194 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 RNF225M0QZC1 329 aaPredicted RBP14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 KCNK3O14649 394 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 CER1O95813 267 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 LATS1O95835 1130 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 CALCAP01258 141 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 FYNP06241 537 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 IGHV4-34P06331 123 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 PABPC1P11940 636 aaKnown RBP14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 RDXP35241 583 aaKnown RBP14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 PRCPP42785 496 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 PIK3R6Q5UE93 754 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 MBLAC2Q68D91 279 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 NADSYN1Q6IA69 706 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 PMF1Q6P1K2 205 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 RFWD3Q6PCD5 774 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 CCDC150Q8NCX0 1101 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 WFIKKN2Q8TEU8 576 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 SETD7Q8WTS6 366 aaKnown RBP14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 CLEC4CQ8WTT0 213 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 SLC35F5Q8WV83 523 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 SLC35C1Q96A29 364 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 TMA16Q96EY4 203 aaKnown RBP14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 EBF2Q9HAK2 575 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 OLA1Q9NTK5 396 aaKnown RBP14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 SERGEFQ9UGK8 458 aa14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 APOBEC2Q9Y235 224 aaKnown RBP14.96□□□□□ -0.01
CHMP4BP1-201ENST00000556017 FLRT2O43155 660 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms