RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 FCRL2Q96LA5 508 aaPredicted RBP9.34□□□□□ -0.91
CHD8-210ENST00000555962 SERPINB11Q96P15 392 aa9.34□□□□□ -0.91
CHD8-210ENST00000555962 NPY6RQ99463 290 aa9.34□□□□□ -0.91
CHD8-210ENST00000555962 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.34□□□□□ -0.91
CHD8-210ENST00000555962 TRIM62Q9BVG3 475 aa9.34□□□□□ -0.91
CHD8-210ENST00000555962 ECT2Q9H8V3 914 aa9.34□□□□□ -0.91
CHD8-210ENST00000555962 ARHGEF3Q9NR81 526 aa9.34□□□□□ -0.91
CHD8-210ENST00000555962 CALCOCO1Q9P1Z2 691 aa9.34□□□□□ -0.91
CHD8-210ENST00000555962 LSM7Q9UK45 103 aaKnown RBP9.34□□□□□ -0.91
CHD8-210ENST00000555962 FBXL21Q9UKT6 434 aa9.34□□□□□ -0.91
CHD8-210ENST00000555962 AGO1Q9UL18 857 aaKnown RBP9.34□□□□□ -0.91
CHD8-210ENST00000555962 SLC9A3R1O14745 358 aaPredicted RBP9.33□□□□□ -0.92
CHD8-210ENST00000555962 IRAK2O43187 625 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 FTLP02792 175 aaPredicted RBP9.33□□□□□ -0.92
CHD8-210ENST00000555962 CD72P21854 359 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 CDC25BP30305 580 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 GJA4P35212 333 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 RFC1P35251 1148 aaPredicted RBP9.33□□□□□ -0.92
CHD8-210ENST00000555962 MATKP42679 507 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 SULT1E1P49888 294 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 CDK17Q00537 523 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 GFPT1Q06210 699 aaPredicted RBP9.33□□□□□ -0.92
CHD8-210ENST00000555962 RING1Q06587 406 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 DHCR24Q15392 516 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 MLF2Q15773 248 aaPredicted RBP9.33□□□□□ -0.92
CHD8-210ENST00000555962 RAB6CQ53S08 254 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 ZC3H12AQ5D1E8 599 aaKnown RBP9.33□□□□□ -0.92
CHD8-210ENST00000555962 LY6G5CQ5SRR4 150 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 TXNDC11Q6PKC3 985 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 TPRG1Q6ZUI0 275 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 ARCQ7LC44 396 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 TMEM25Q86YD3 366 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 CPA6Q8N4T0 437 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 C3orf20Q8ND61 904 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 ATP2A3Q93084 1043 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 NT5C3BQ969T7 300 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 VCPIP1Q96JH7 1222 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 CFAP57Q96MR6 1250 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 TBCBQ99426 244 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 DDX23Q9BUQ8 820 aaKnown RBP9.33□□□□□ -0.92
CHD8-210ENST00000555962 DCLK3Q9C098 648 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 RAB6CQ9H0N0 254 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 ISCUQ9H1K1 167 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 FAM204AQ9H8W3 233 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 DDIT4Q9NX09 232 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.33□□□□□ -0.921e-6■□□□□ 10.4
CHD8-210ENST00000555962 WDR35Q9P2L0 1181 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 TBC1D14Q9P2M4 693 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 EGFL7Q9UHF1 273 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 TLR6Q9Y2C9 796 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 PIAS3Q9Y6X2 628 aa9.33□□□□□ -0.92
CHD8-210ENST00000555962 CHD5Q8TDI0 1954 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 SYNJ2BP-COX16A0A087WUM0 186 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 GOLGA6L7A0A1B0GV03 622 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 SSU72P8A0A1W2PR75 194 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 C2CD4BA6NLJ0 364 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 SIGLEC16A6NMB1 481 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 SPECC1L-ADORA2AF8WAN1 911 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 M0QYT0 321 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 NFATC1O95644 943 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 KRT3P12035 628 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 KPNA1P52294 538 aaPredicted RBP9.32□□□□□ -0.92
CHD8-210ENST00000555962 ATXN1P54253 815 aaKnown RBP9.32□□□□□ -0.92
CHD8-210ENST00000555962 VCPP55072 806 aaKnown RBP9.32□□□□□ -0.92
CHD8-210ENST00000555962 STARD6P59095 220 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 RPL7AP62424 266 aaKnown RBP9.32□□□□□ -0.92
CHD8-210ENST00000555962 OGDHQ02218 1023 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 PRKCQQ04759 706 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 NME3Q13232 169 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 NNTQ13423 1086 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 C15orf59Q2T9L4 293 aaPredicted RBP9.32□□□□□ -0.92
CHD8-210ENST00000555962 SLC25A52Q3SY17 297 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 CCDC14Q49A88 953 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 CCDC122Q5T0U0 273 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 SH3PXD2AQ5TCZ1 1133 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 CWF19L1Q69YN2 538 aaKnown RBP9.32□□□□□ -0.92
CHD8-210ENST00000555962 NADSYN1Q6IA69 706 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 PLEKHA7Q6IQ23 1121 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 PPP1R2P3Q6NXS1 205 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 DNAJC24Q6P3W2 148 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 ALKBH5Q6P6C2 394 aaKnown RBP9.32□□□□□ -0.92
CHD8-210ENST00000555962 BNIPLQ7Z465 357 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 VPS36Q86VN1 386 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 FAM217AQ8IXS0 508 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 SPC24Q8NBT2 197 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 RXFP2Q8WXD0 754 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 ZNF653Q96CK0 615 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 OTUB2Q96DC9 234 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 KCTD15Q96SI1 283 aaPredicted RBP9.32□□□□□ -0.92
CHD8-210ENST00000555962 SELENOOQ9BVL4 669 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 FOXQ1Q9C009 403 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 C8orf33Q9H7E9 229 aaPredicted RBP9.32□□□□□ -0.92
CHD8-210ENST00000555962 NHEJ1Q9H9Q4 299 aaPredicted RBP9.32□□□□□ -0.92
CHD8-210ENST00000555962 TBC1D17Q9HA65 648 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 ANLNQ9NQW6 1124 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 SPHK2Q9NRA0 654 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 PIGVQ9NUD9 493 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 SPTLC3Q9NUV7 552 aa9.32□□□□□ -0.92
CHD8-210ENST00000555962 ZNHIT6Q9NWK9 470 aaKnown RBP9.32□□□□□ -0.92
CHD8-210ENST00000555962 COX16Q9P0S2 106 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms