RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 TEAD2Q15562 447 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 LRIT3Q3SXY7 679 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 PIK3R6Q5UE93 754 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 TTC27Q6P3X3 843 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 BBS12Q6ZW61 710 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 B4GALNT4Q76KP1 1039 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 RTL10Q7L3V2 364 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 C14orf80Q86SX3 495 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.56□□□□□ -0.72
SRP54-208ENST00000555557 HDAC7Q8WUI4 952 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 LRRN4Q8WUT4 740 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 FAF2Q96CS3 445 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 HAPLN3Q96S86 360 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 RHOXF2Q9BQY4 288 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 LRRC1Q9BTT6 524 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 KLF16Q9BXK1 252 aaPredicted RBP10.56□□□□□ -0.72
SRP54-208ENST00000555557 SLC46A2Q9BY10 475 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 SMG9Q9H0W8 520 aaKnown RBP10.56□□□□□ -0.72
SRP54-208ENST00000555557 NSUN3Q9H649 340 aaKnown RBP10.56□□□□□ -0.72
SRP54-208ENST00000555557 PIDD1Q9HB75 910 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 ZDHHC7Q9NXF8 308 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 AMACRQ9UHK6 382 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 DPP7Q9UHL4 492 aa10.56□□□□□ -0.72
SRP54-208ENST00000555557 SPTBN5Q9NRC6 3674 aaKnown RBP10.56□□□□□ -0.72
SRP54-208ENST00000555557 EYSQ5T1H1 3165 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 GOLGA6L10A0A0M3HER8 536 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 SOX1O00570 391 aaPredicted RBP10.55□□□□□ -0.72
SRP54-208ENST00000555557 DAPK3O43293 454 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 STC2O76061 302 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 KLKB1P03952 638 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 SLC2A3P11169 496 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 EPHA5P54756 1037 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 TPI1P60174 286 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 COG7P83436 770 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 SLC7A5Q01650 507 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 ITIH3Q06033 890 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 CLUL1Q15846 466 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 MS4A13Q5J8X5 152 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 FAM182AQ5T1J6 154 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 GPR158Q5T848 1215 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 POTEHQ6S545 545 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 RFX8Q6ZV50 586 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 DENND1CQ8IV53 801 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 MMGT1Q8N4V1 131 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 PLD5Q8N7P1 536 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 SMG7Q92540 1137 aaKnown RBP10.55□□□□□ -0.72
SRP54-208ENST00000555557 UBXN4Q92575 508 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 RPGRIP1Q96KN7 1286 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 ZFRQ96KR1 1074 aaKnown RBP10.55□□□□□ -0.72
SRP54-208ENST00000555557 FAM161BQ96MY7 647 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 GCNAQ96QF7 691 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 DCLK3Q9C098 648 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 OSBPL2Q9H1P3 480 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 C10orf88Q9H8K7 445 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 ARHGEF4Q9NR80 690 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 EFR3BQ9Y2G0 817 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 HBS1LQ9Y450 684 aaKnown RBP10.55□□□□□ -0.72
SRP54-208ENST00000555557 HEY1Q9Y5J3 304 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 CPQQ9Y646 472 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 ATG2AQ2TAZ0 1938 aa10.55□□□□□ -0.72
SRP54-208ENST00000555557 MTCL1Q9Y4B5 1905 aaKnown RBP10.55□□□□□ -0.72
SRP54-208ENST00000555557 UQCRHLA0A096LP55 91 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 H3BRJ5 948 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 CCDC188H7C350 402 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 APOL1O14791 398 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 OLFM2O95897 454 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 CKMP06732 381 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 UQCRHP07919 91 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 EPHB2P29323 1055 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 CORO1AP31146 461 aaKnown RBP10.54□□□□□ -0.72
SRP54-208ENST00000555557 KPNA1P52294 538 aaPredicted RBP10.54□□□□□ -0.72
SRP54-208ENST00000555557 MLLT6P55198 1093 aaPredicted RBP10.54□□□□□ -0.72
SRP54-208ENST00000555557 OTUD4Q01804 1114 aaKnown RBP10.54□□□□□ -0.72
SRP54-208ENST00000555557 RING1Q06587 406 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 DPYSQ14117 519 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 TFDP2Q14188 446 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 CBX2Q14781 532 aaPredicted RBP10.54□□□□□ -0.72
SRP54-208ENST00000555557 RARS2Q5T160 578 aaKnown RBP10.54□□□□□ -0.72
SRP54-208ENST00000555557 ARTNQ5T4W7 220 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 RAP1GAP2Q684P5 730 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 SLC9A4Q6AI14 798 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 NADSYN1Q6IA69 706 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 RWDD4Q6NW29 188 aaKnown RBP10.54□□□□□ -0.72
SRP54-208ENST00000555557 CCDC137Q6PK04 289 aaKnown RBP10.54□□□□□ -0.72
SRP54-208ENST00000555557 ATP6V0D2Q8N8Y2 350 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 ACTL9Q8TC94 416 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 ADAMTS19Q8TE59 1207 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 MAIP1Q8WWC4 291 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 ING5Q8WYH8 240 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 PPP2R3CQ969Q6 453 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 MYEOVQ96EZ4 313 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 BTN2A3PQ96KV6 586 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 CDCA3Q99618 268 aaPredicted RBP10.54□□□□□ -0.72
SRP54-208ENST00000555557 EPAS1Q99814 870 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 MPP6Q9NZW5 540 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 SLC12A6Q9UHW9 1150 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 DNPEPQ9ULA0 475 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 VANGL2Q9ULK5 521 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 C5orf42Q9H799 3197 aa10.54□□□□□ -0.72
SRP54-208ENST00000555557 E9PAM4 449 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms