RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 C18orf8Q96DM3 657 aa14.2□□□□□ -0.14
SNX6-203ENST00000555416 SYNCQ9H7C4 482 aa14.2□□□□□ -0.14
SNX6-203ENST00000555416 FAM204AQ9H8W3 233 aa14.2□□□□□ -0.14
SNX6-203ENST00000555416 ANLNQ9NQW6 1124 aa14.2□□□□□ -0.14
SNX6-203ENST00000555416 DDIT4Q9NX09 232 aa14.2□□□□□ -0.14
SNX6-203ENST00000555416 CACNA2D2Q9NY47 1150 aa14.2□□□□□ -0.14
SNX6-203ENST00000555416 COX16Q9P0S2 106 aa14.2□□□□□ -0.14
SNX6-203ENST00000555416 CEP83Q9Y592 693 aa14.2□□□□□ -0.14
SNX6-203ENST00000555416 SDK1Q7Z5N4 2213 aa14.2□□□□□ -0.14
SNX6-203ENST00000555416 CCDC163A0A0D9SF12 145 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 KCNU1A8MYU2 1149 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 GOLGA8SH3BPF8 625 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 I6L893 689 aaPredicted RBP14.19□□□□□ -0.14
SNX6-203ENST00000555416 TBL1XO60907 577 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 GJB6O95452 261 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 FLT3P36888 993 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 DGKEP52429 567 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 CDK17Q00537 523 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 NME3Q13232 169 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 SIM2Q14190 667 aaPredicted RBP14.19□□□□□ -0.14
SNX6-203ENST00000555416 EOGTQ5NDL2 527 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 E4F1Q66K89 784 aaPredicted RBP14.19□□□□□ -0.14
SNX6-203ENST00000555416 RAP1GAP2Q684P5 730 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 MMS22LQ6ZRQ5 1243 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 KBTBD6Q86V97 674 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 FRMD1Q8N878 549 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 ZNF397Q8NF99 534 aaPredicted RBP14.19□□□□□ -0.14
SNX6-203ENST00000555416 CCDC26Q8TAB7 109 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 GAB3Q8WWW8 586 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 LMLNQ96KR4 655 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 NPY6RQ99463 290 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 PRMT1Q99873 361 aaKnown RBP14.19□□□□□ -0.14
SNX6-203ENST00000555416 TRIM62Q9BVG3 475 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 ABCB8Q9NUT2 735 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 STIM2Q9P246 746 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 EBF1Q9UH73 591 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 RAD54BQ9Y620 910 aa14.19□□□□□ -0.14
SNX6-203ENST00000555416 TCRBV21S2A2A0A5A6 115 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 RPP40O75818 363 aaKnown RBP14.18□□□□□ -0.14
SNX6-203ENST00000555416 TGM1P22735 817 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 NTSR1P30989 418 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 CD70P32970 193 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 NOS2P35228 1153 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 GGCXP38435 758 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 MATKP42679 507 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 IRAK1P51617 712 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 ATXN1P54253 815 aaKnown RBP14.18□□□□□ -0.14
SNX6-203ENST00000555416 PTP4A2Q12974 167 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 NR1I3Q14994 352 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 HSF5Q4G112 596 aaPredicted RBP14.18□□□□□ -0.14
SNX6-203ENST00000555416 PREPLQ4J6C6 727 aaPredicted RBP14.18□□□□□ -0.14
SNX6-203ENST00000555416 RAB6CQ53S08 254 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 MS4A13Q5J8X5 152 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 FAM102AQ5T9C2 384 aaPredicted RBP14.18□□□□□ -0.14
SNX6-203ENST00000555416 IRF2BP2Q7Z5L9 587 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 ANKS1BQ7Z6G8 1248 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 KIAA0907Q7Z7F0 614 aaPredicted RBP14.18□□□□□ -0.14
SNX6-203ENST00000555416 ADIPOR2Q86V24 386 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 ZNF677Q86XU0 584 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 CHPFQ8IZ52 775 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 LGI2Q8N0V4 545 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 FAM160A2Q8N612 972 aaPredicted RBP14.18□□□□□ -0.14
SNX6-203ENST00000555416 KCNV2Q8TDN2 545 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 HMGB4Q8WW32 186 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 RLN3Q8WXF3 142 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 SYT11Q9BT88 431 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 SLC2A11Q9BYW1 496 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 RAB6CQ9H0N0 254 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 SLC6A17Q9H1V8 727 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 PARD6AQ9NPB6 346 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 TMPRSS4Q9NRS4 437 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 PIGVQ9NUD9 493 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 ELOVL2Q9NXB9 296 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 TMEM59LQ9UK28 342 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 DAAM1Q9Y4D1 1078 aa14.18□□□□□ -0.14
SNX6-203ENST00000555416 DMXL1Q9Y485 3027 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 M0QYT0 321 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 APOEP02649 317 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 UNGP13051 313 aaPredicted RBP14.17□□□□□ -0.14
SNX6-203ENST00000555416 HOXB2P14652 356 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 GABRG2P18507 467 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 TACR2P21452 398 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 BCKDHBP21953 392 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 MMP8P22894 467 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 CNR2P34972 360 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 IL12RB1P42701 662 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 FANCCQ00597 558 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 ZNF234Q14588 700 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 FSCBQ5H9T9 825 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 ARTNQ5T4W7 220 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 CEP68Q76N32 757 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 CHSY1Q86X52 802 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 CIR1Q86X95 450 aaPredicted RBP14.17□□□□□ -0.14
SNX6-203ENST00000555416 ZDHHC17Q8IUH5 632 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 EMC1Q8N766 993 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 RUBCNQ92622 972 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 NT5C3BQ969T7 300 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 BTN2A3PQ96KV6 586 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 TBCBQ99426 244 aa14.17□□□□□ -0.14
SNX6-203ENST00000555416 GABRG3Q99928 467 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms