RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 UBA5Q9GZZ9 404 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 SAP30LQ9HAJ7 183 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 SAYSD1Q9NPB0 183 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 RIC8AQ9NPQ8 531 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 HELLSQ9NRZ9 838 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 RXFP3Q9NSD7 469 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 TFCP2L1Q9NZI6 479 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 KCND3Q9UK17 655 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 FZD4Q9ULV1 537 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 GXYLT2A0PJZ3 443 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 FAM90A18PA6NE21 464 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 FAM90A16PA6NEW6 464 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 FAM90A9PA6NNJ1 464 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 FAM90A5PA8MXJ8 464 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 UBE2Q2LH0YL09 131 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 PPP6CO00743 305 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 FAM155BO75949 473 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 FAM90A15PP0C7V4 464 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 FAM90A14PP0C7W9 464 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 TMIGD3P0DMS9 266 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-213ENST00000554776 CYP2D6P10635 497 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 CST5P28325 142 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-213ENST00000554776 MPGP29372 298 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 RAE1P78406 368 aaKnown RBP3.54□□□□□ -1.84
SCFD1-213ENST00000554776 LMOD3Q0VAK6 560 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 G3BP1Q13283 466 aaKnown RBP eCLIP3.54□□□□□ -1.84
SCFD1-213ENST00000554776 PDCLQ13371 301 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 BFSP2Q13515 415 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 FAM187BQ17R55 369 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 FAM110CQ1W6H9 321 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 CERKLQ49MI3 558 aaPredicted RBP3.54□□□□□ -1.84
SCFD1-213ENST00000554776 LRRC24Q50LG9 513 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 CEP78Q5JTW2 689 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 FBXO47Q5MNV8 452 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 TMEM63BQ5T3F8 832 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 JAKMIP3Q5VZ66 844 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 MSANTD2Q6P1R3 559 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 SERPINA13PQ6UXR4 307 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 SYNE3Q6ZMZ3 975 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 SYT13Q7L8C5 426 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 NEK8Q86SG6 692 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 HEATR4Q86WZ0 1026 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 P3H2Q8IVL5 708 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 CPOQ8IVL8 374 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 HERC6Q8IVU3 1022 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 NGDNQ8NEJ9 315 aaKnown RBP3.54□□□□□ -1.84
SCFD1-213ENST00000554776 ADAMTS18Q8TE60 1221 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 GOLGA1Q92805 767 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 COG8Q96MW5 612 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 DDX23Q9BUQ8 820 aaKnown RBP3.54□□□□□ -1.84
SCFD1-213ENST00000554776 C1QTNF7Q9BXJ2 289 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 CHODLQ9H9P2 273 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 SEMA5BQ9P283 1151 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 CNTN6Q9UQ52 1028 aa3.54□□□□□ -1.84
SCFD1-213ENST00000554776 ZNF804BA4D1E1 1349 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 E7EVH7 732 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 M0QZQ0 153 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 CTIFO43310 598 aaKnown RBP3.53□□□□□ -1.84
SCFD1-213ENST00000554776 CYP21A2P08686 494 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 PRR35P0CG20 571 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 CYP2A6P11509 494 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-213ENST00000554776 ALADP13716 330 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 TNFAIP3P21580 790 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 KELP23276 732 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 GALNSP34059 522 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 GSTM5P46439 218 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 AARSP49588 968 aaKnown RBP eCLIP3.53□□□□□ -1.84
SCFD1-213ENST00000554776 TUBP50607 506 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 RNASELQ05823 741 aaKnown RBP3.53□□□□□ -1.84
SCFD1-213ENST00000554776 CCDC15Q0P6D6 951 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 SLC12A1Q13621 1099 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 KCNB1Q14721 858 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 SRSF7Q16629 238 aaKnown RBP eCLIP3.53□□□□□ -1.84
SCFD1-213ENST00000554776 ADCK5Q3MIX3 580 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 GALNTL6Q49A17 601 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 AWAT1Q58HT5 328 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 CCDC144NLQ6NUI1 221 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 DCDC5Q6ZRR9 648 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 RASGRP2Q7LDG7 609 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 C1QL2Q7Z5L3 287 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 YTHDF3Q7Z739 585 aaKnown RBP3.53□□□□□ -1.84
SCFD1-213ENST00000554776 TTC30AQ86WT1 665 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 GALNT16Q8N428 558 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 ESX1Q8N693 406 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 CEP70Q8NHQ1 597 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 ZNF398Q8TD17 642 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 SLC22A17Q8WUG5 538 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 HMGB4Q8WW32 186 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 OVCA2Q8WZ82 227 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 MAELQ96JY0 434 aaKnown RBP3.53□□□□□ -1.84
SCFD1-213ENST00000554776 CCDC17Q96LX7 622 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 C5orf34Q96MH7 638 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 PYM1Q9BRP8 204 aaKnown RBP3.53□□□□□ -1.84
SCFD1-213ENST00000554776 CINPQ9BW66 212 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-213ENST00000554776 QTRT1Q9BXR0 403 aaKnown RBP3.53□□□□□ -1.84
SCFD1-213ENST00000554776 USP29Q9HBJ7 922 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 KCNK9Q9NPC2 374 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 ZNF70Q9UC06 446 aaPredicted RBP3.53□□□□□ -1.84
SCFD1-213ENST00000554776 ANAPC4Q9UJX5 808 aa3.53□□□□□ -1.84
SCFD1-213ENST00000554776 VPS4AQ9UN37 437 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms